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The Fourth Paradigm 10 Years On

References

  1. 1.

    The National Oceanic and Atmospheric Administration OAA Data Discovery Portal. data.noaa.gov, last access: 15.10.2019

  2. 2.

    The big ocean button challenge. https://www.herox.com/bigoceanbutton/entries, last access: 15.10.2019

  3. 3.

    The Dryad Digital Repository. www.datadryad.org/, last access: 15.10.2019

  4. 4.

    The Zendo repository. https://zenodo.org/, last access: 15.10.2019

  5. 5.

    Alfred P Sloan foundation funding. http://blog.zenodo.org/2019/07/17/2019-07-17-dryad-partnership/, last access: 15.10.2019

  6. 6.

    Argelaguet R, Velten B, Arnol D, Dietrich S, Zenz T, Marioni JC, Buettner F, Huber W, Stegle O (2018) Multi-omics Factor Analysis – a framework for unsupervised integration of multi-omics data sets. Molecular Systems Biology, https://doi.org/10.15252/msb.20178124, last access: 15.10.2019

  7. 7.

    Mnih V, Kavukcuoglu K, Silver D, Rusu AA, Veness J, Bellemare MG, Graves A, Riedmiller M, Fidjeland AK, Ostrovski G, Petersen S, Beattie C, Sadik A, Antonoglou I, King H, Kumaran D, Wierstra D, Legg S, Hassabis D (2015) Human-level control through deep reinforcement learning. Nature 518:529–533, https://www.nature.com/articles/nature14236, last access: 15.10.2019

  8. 8.

    Russakovsky O, Deng J, Su H, Krause J, Satheesh S, Ma S, Huang Z, Karpathy A, Khosla A, Bernstein M, Berg AC, Fei-Fei L (2015) ImageNet large scale visual recognition challenge. Int J Comput Vision 115:211–252, https://link.springer.com/article/10.1007/s11263-015-0816-y

  9. 9.

    Esteva A, Kuprel B, Novoa RA, Ko J, Swetter SM, Blau HM, Thrun S (2017) Dermatologist-level classification of skin cancer with deep neural networks. Nature 542:115–118, https://www.nature.com/articles/nature21056

  10. 10.

    Fogel AL, Kvedar JC (2018) Artificial intelligence powers digital medicine. npj Digital Medicine, https://doi.org/10.1038/s41746-017-0012-2, last access: 15.10.2019

  11. 11.

    Hinton G (2018) Deep learning – a technology with the potential to transform health care. JAMA 320(11):1101–1102, https://doi.org/10.1001/jama.2018.11100, last access: 15.10.2019

  12. 12.

    Foster I, Gannon DB (2017) Cloud Computing for Science and Engineering. MIT Press, Cambridge London, https://mitpress.mit.edu/books/cloud-computing-science-and-engineering, last access: 15.10.2019

  13. 13.

    The National Infrastructure Commission. https://www.nic.org.uk, last access: 10/2019

  14. 14.

    The National Infrastructure Commission Data As Infrastructure Report. https://www.nic.org.uk/wp-content/uploads/Data-As-Infrastructure.pdf, last access: 15.10.2019

  15. 15.

    The National Infrastructure Commission Data for the Public Good Report. https://www.nic.org.uk/wp-content/uploads/Data-for-the-Public-Good-NIC-Report.pdf, last access: 15.10.2019

  16. 16.

    DAFNI: Data & Analytics Facility for National Infrastructure. https://www.dafni.ac.uk/, last access: 15.10.2019

  17. 17.

    Atkinson M, Gesing S, Montagnat J, Taylor I (2017) Scientific workflows: past, present and future. Future Gener Comp Sy 75:216–227

  18. 18.

    The Common Workflow Language. https://www.commonwl.org/, last access: 15.10.2019

  19. 19.

    The ELIXIR project. https://elixir-europe.org/, last access: 15.10.2019

  20. 20.

    The Oxford Research Archive. https://www.bodleian.ox.ac.uk/bdlss/digital-services/data-archiving, last access: 15.10.2019

  21. 21.

    Research Data at Springer Nature. https://researchdata.springernature.com/, last access: 15.10.2019

  22. 22.

    Nature Scientific data. https://www.nature.com/sdata/, last access: 15.10.2019

  23. 23.

    OECD Open Science. http://www.oecd.org/sti/inno/open-science.htm, last access: 15.10.2019

  24. 24.

    Fostering Open Science Project. https://www.fosteropenscience.eu/, last access: 15.10.2019

  25. 25.

    Schema.org. https://schema.org/, last access: 15.10.2019

  26. 26.

    Bioschemas. https://bioschemas.org/, last access: 15.10.2019

  27. 27.

    JSON for Linking Data. https://json-ld.org/, last access: 15.10.2019

  28. 28.

    Turing award winners. https://amturing.acm.org/, last access: 15.10.2019

  29. 29.

    Deng J, Dong W, Socher R, Li L-J, Li K, Fei-Fei L (2009) ImageNet: A Large-Scale Hierarchical Image Database. In: CVPR09, http://image-net.org/papers/imagenet_cvpr09.pdf, last access: 15.10.2019

  30. 30.

    Krizhevsky A, Sutskever I, Hinton GE (2017) ImageNet classification with deep convolutional neural networks. Commun ACM 60(6):84–90, https://doi.org/10.1145/3065386, last access: 15.10.2019

  31. 31.

    Microsoft Research 2015 win. https://blogs.microsoft.com/ai/microsoft-researchers-win-imagenet-computer-vision-challenge/, last access: 15.10.2019

  32. 32.

    AlphaFold: Using AI for scientific discovery: https://deepmind.com/blog/alphafold/, last access: 15.10.2019

  33. 33.

    Evans R, Jumper J, Kirkpatrick J, Sifre L, Green TFG, Qin C, Zidek A, Nelson A, Bridgland A, Penedones H, Petersen S, Simonyan K, Crossan S, Jones DT, Silver D, Kavukcuoglu K, Hassabis D, Senior AW (2018) De novo structure prediction with deep-learning based scoring. In: Thirteenth Critical Assessment of Techniques for Protein Structure Prediction (Abstracts), 1–4 December 2018. Retrieved from: https://kstatic.googleusercontent.com/files/b4d715e8f8b6514cbfdc28a9ad83e14b6a8f86c34ea3b3cc844af8e76767d21ac3df5b0a9177d5e3f6a40b74caf7281a386af0fab8ca62f687599abaf8c8810f, last access: 15.10.2019

  34. 34.

    Geoffrey Hinton as quoted by Jeremy Howard in 2014. https://www.ted.com/talks/jeremy_howard_the_wonderful_and_terrifying_implications_of_computers_that_can_learn, last access: 15.10.2019

  35. 35.

    OSTP Memorandum. https://obamawhitehouse.archives.gov/sites/default/files/microsites/ostp/ostp_public_access_memo_2013.pdf, last access: 15.10.2019

  36. 36.

    The Global Research Council statement on Open Access. https://www.globalresearchcouncil.org/fileadmin/documents/GRC_Publications/grc_action_plan_open_access_FINAL.pdf, last access: 15.10.2019

  37. 37.

    G8 Open Data Charter. https://assets.publishing.service.gov.uk/government/uploads/system/uploads/attachment_data/file/207772/Open_Data_Charter.pdf, last access: 15.10.2019

  38. 38.

    Plan–S. https://www.coalition-s.org/, last access: 15.10.2019

  39. 39.

    Wilkinson MD, Dumontier M, Aalbersberg IJ, Appleton G, Axton M, Baak A, Blomberg N, Boiten J-W, da Silva Santos LB, Bourne PE, Bouwman J, Brookes AJ, Clark T, Crosas M, Dillo I, Dumon O, Edmunds S, Evelo CT, Finkers R, Gonzalez-Beltran A, Gray AJG, Groth P, Goble C, Grethe JS, Heringa J, ’t Hoen PAC, Hooft R, Kuhn T, Kok R, Kok J, Lusher SJ, Martone ME, Mons A, Packer AL, Persson B, Rocca-Serra P, Roos M, van Schaik R, Sansone S-A, Schultes E, Sengstag T, Slater T, Strawn G, Swertz MA, Thompson M, van der Lei J, van Mulligen E, Velterop J, Waagmeester A, Wittenburg P, Wolstencroft K, Zhao J, Mons B (2016) The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3:160018, https://doi.org/10.1038/sdata.2016.18, last access: 15.10.2019

  40. 40.

    Sansone S-A, McQuilton P, Rocca-Serra P, Gonzalez-Beltran A, Izzo M, Lister AL, Thurston M, the FAIRsharing Community (2019) FAIRsharing as a community approach to standards, repositories and policies. Nat Biotechnol 7:358–367, https://doi.org/10.1038/s41587-019-0080-8, last access: 15.10.2019

  41. 41.

    FAIRsharing standards and policy site. https://fairsharing.org/, last access: 15.10.2019

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Correspondence to Tony Hey.

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Hey, T., Trefethen, A. The Fourth Paradigm 10 Years On. Informatik Spektrum 42, 441–447 (2020). https://doi.org/10.1007/s00287-019-01215-9

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