Applied Microbiology and Biotechnology

, Volume 101, Issue 6, pp 2273–2279 | Cite as

Two novel cyclic hexapeptides from the genetically engineered Actinosynnema pretiosum

Biotechnological products and process engineering

Abstract

Two novel cyclic hexapeptides designated actinosynneptides A (1) and B (2), together with three tryptophan containing diketopiperazines, namely cyclo(L-Trp-L-Trp) (3), cyclo(L-Trp-N-MeL-Trp) (4), and cyclo(N-MeL-Trp-N-MeL-Trp) (5), were isolated from the culture of the genetically engineered strain HGF052::asm18 derived from Actinosynnema pretiosum ATCC31565. Their structures were elucidated on the basis of spectroscopic analyses and single-crystal X-ray diffractions. Compound 1 is the first example of 3-amino-6-hydroxy-2-piperidone-containing cyclic peptides, and 1 and 2 showed moderate cytotoxic activities against HeLa and PC3 cell lines.

Keywords

Actinosynnema pretiosum Cyclic hexapeptide Diketopiperazine 

Notes

Compliance with ethical standards

This article does not contain any studies with human participants or animals performed by any of the authors.

Conflict of interest

The authors declare that they have no conflict of interest.

Funding information

This work was supported by the National Natural Science Foundation of China (81373304, 81673317), Science Foundation of Two Sides of Strait (U1405223), and Program for Changjiang Scholars and Innovative Research Team in University (IRT13028).

Supplementary material

253_2016_8017_MOESM1_ESM.pdf (1.4 mb)
ESM 1 (PDF 1.39 MB)

References

  1. Asamizu S, Abugreen M, Mahmud T (2013) Comparative metabolomic analysis of an alternative biosynthetic pathway to pseudosugars in Actinosynnema mirum DSM 43827. Chembiochem 14:1548–1551. doi: 10.1002/cbic.201300384 CrossRefPubMedGoogle Scholar
  2. Borthwick AD (2012) 2,5-Diketopiperazines: synthesis, reactions, medicinal chemistry, and bioactive natural products. Chem Rev 112:3641–3716. doi: 10.1021/cr200398y CrossRefPubMedGoogle Scholar
  3. Buckley M, Gjyshi A, Mendoza-Fandino G, Baskin R, Carvalho RS, Carvalho MA, Woods NT, Monteiro ANA (2016) Enhancer scanning to locate regulatory regions in genomic loci. Nat Protocols 11:46–60. doi: 10.1038/nprot.2015.136 CrossRefPubMedGoogle Scholar
  4. Giessen TW, von Tesmar AM, Marahiel MA (2013) A tRNA-dependent two-enzyme pathway for the generation of singly and doubly methylated ditryptophan 2,5-diketopiperazines. Biochemistry 52:4274–4283. doi: 10.1021/bi4004827 CrossRefPubMedGoogle Scholar
  5. Hashimoto M, Komori TA, Kamiya T (1976) Nocardicins A and B, novel monocyclic beta-lactam antibiotics from a Nocardia species. J Am Chem Soc 98:3023–3025CrossRefPubMedGoogle Scholar
  6. Higashide E, Asai M, Ootsu K, Tanida S, Kozai Y, Hasegawa T, Kishi T, Sugino Y, Yoneda M (1977) Ansamitocin, a group of novel maytansinoid antibiotics with antitumour properties from Nocardia. Nature 270:721–722CrossRefPubMedGoogle Scholar
  7. Huang R, Zhou X, Xu T, Yang X, Liu Y (2010) Diketopiperazines from marine organisms. Chem Biodivers 7:2809–2829. doi: 10.1002/cbdv.200900211 CrossRefPubMedGoogle Scholar
  8. Huang RM, Yi XX, Zhou Y, Su X, Peng Y, Gao CH (2014) An update on 2,5-diketopiperazines from marine organisms. Mar Drugs 12:6213–6235. doi: 10.3390/md12126213 CrossRefPubMedPubMedCentralGoogle Scholar
  9. Kang H-S, Krunic A, Orjala J (2012) Stigonemapeptin, an Ahp-containing depsipeptide with elastase inhibitory activity from the bloom-forming freshwater cyanobacterium Stigonema sp. J Nat Prod 75:807–811. doi: 10.1021/np300150h CrossRefPubMedPubMedCentralGoogle Scholar
  10. Kozlovsky AG, Vinokurova NG, Adanin VM, Burkhardt G, Dahse HM, Grafe U (2000) New diketopiperazine alkaloids from Penicillium fellutanum. J Nat Prod 63:698–700CrossRefPubMedGoogle Scholar
  11. Li S, Lu C, Chang X, Shen Y (2016) Constitutive overexpression of asm18 increases the production and diversity of maytansinoids in Actinosynnema pretiosum. Appl Microbiol Biotechnol 100:2641–2649. doi: 10.1007/s00253-015-7127-7 CrossRefPubMedGoogle Scholar
  12. Lodin-Friedman A, Carmeli S (2013) Metabolites from Microcystis aeruginosa bloom material collected at a water reservoir near Kibbutz Hafetz Haim, Israel. J Nat Prod 76:1196–1200. doi: 10.1021/np400281q CrossRefPubMedGoogle Scholar
  13. Lu C, Bai L, Shen Y (2004) A novel amide N-glycoside of ansamitocins from Actinosynnema pretiosum. J Antibiot 57:348–350CrossRefPubMedGoogle Scholar
  14. Lu CH, Bai LQ, Shen YM (2008) Five unusual natural carbohydrates from Actinosynnema pretiosum. Chem Nat Compd 44:594–597CrossRefGoogle Scholar
  15. Murao S, Imafuku S, Oyama H (1997) Isolation of propioxatin A from Actinosynnema sp. SI-23 during a screening for Serratia piscatorum metalloproteinase inhibitors. Biosci Biotechnol Biochem 61:561–562. doi: 10.1271/bbb.61.561 CrossRefPubMedGoogle Scholar
  16. Nakanishi I, Kinoshita T, Tada T, Fujita T, Hatanaka H, Sato A (1999) Molecular structure of FR901277, a novel inhibitor of human leukocyte elastase, and its binding mode simulation. Bioorg Med Chem Lett 9:2397–2402. doi: 10.1016/S0960-894X(99)00408-4 CrossRefPubMedGoogle Scholar
  17. Ng D, Chin HK, Wong VV (2009) Constitutive overexpression of asm2 and asm39 increases AP-3 production in the actinomycete Actinosynnema pretiosum. J Ind Microbiol Biotechnol 36:1345–1351. doi: 10.1007/s10295-009-0619-7 CrossRefPubMedGoogle Scholar
  18. Nishizawa T, Ueda A, Nakano T, Nishizawa A, Miura T, Asayama M, Fujii K, Harada K, Shirai M (2011) Characterization of the locus of genes encoding enzymes producing heptadepsipeptide micropeptin in the unicellular cyanobacterium Microcystis. J Biochem 149:475–485. doi: 10.1093/jb/mvq150 CrossRefPubMedGoogle Scholar
  19. Ozasa T, Yoneda T, Hirasawa M, Suzuki K, Tanaka K, Kadota S, Iwanami M (1991) Thiazocins, new aldose reductase inhibitors from Actinosynnema sp. 1. Fermentation, isolation and characterization. J Antibiot 44:768–773CrossRefPubMedGoogle Scholar
  20. Pomilio AB, Battista ME, Vitale AA (2006) Naturally-occurring cyclopeptides: structures and bioactivity. Curr Org Chem 10:2075–2121CrossRefGoogle Scholar
  21. Rouhiainen L, Paulin L, Suomalainen S, Hyytiainen H, Buikema W, Haselkorn R, Sivonen K (2000) Genes encoding synthetases of cyclic depsipeptides, anabaenopeptilides, in Anabaena strain 90. Mol Microbiol 37:156–167CrossRefPubMedGoogle Scholar
  22. Spiteller P, Bai L, Shang G, Carroll BJ, Yu TW, Floss HG (2003) The post-polyketide synthase modification steps in the biosynthesis of the antitumor agent ansamitocin by Actinosynnema pretiosum. J Am Chem Soc 125:14236–14237. doi: 10.1021/ja038166y CrossRefPubMedGoogle Scholar
  23. Strauss J, Daub J (2002) Optically active cyclic hexapeptides with covalently attached pyrene probes: selective alkaline earth metal ion recognition using excimer emission. Org Lett 4:683–686CrossRefPubMedGoogle Scholar
  24. Tan NH, Zhou J (2006) Plant cyclopeptides. Chem Rev 106:840–895. doi: 10.1021/cr040699h CrossRefPubMedGoogle Scholar
  25. Tooming-Klunderud A, Rohrlack T, Shalchian-Tabrizi K, Kristensen T, Jakobsen KS (2007) Structural analysis of a non-ribosomal halogenated cyclic peptide and its putative operon from Microcystis: implications for evolution of cyanopeptolins. Microbiology 153:1382–1393. doi: 10.1099/mic.0.2006/001123-0 CrossRefPubMedGoogle Scholar
  26. Tsukamoto S, Painuly P, Young KA, Yang X, Shimizu Y, Cornell L (1993) Microcystilide A: a novel cell-differentiation-promoting depsipeptide from Microcystis aeruginosa NO-15-1840. J Am Chem Soc 115:11046–11047. doi: 10.1021/ja00076a095 CrossRefGoogle Scholar
  27. Tsukamoto S, Umaoka H, Yoshikawa K, Ikeda T, Hirota H (2010) Notoamide O, a structurally unprecedented prenylated indole alkaloid, and notoamides P-R from a marine-derived fungus, Aspergillus sp. J Nat Prod 73:1438–1440. doi: 10.1021/np1002498 CrossRefPubMedGoogle Scholar
  28. Viehrig K, Surup F, Harmrolfs K, Jansen R, Kunze B, Muller R (2013) Concerted action of P450 plus helper protein to form the amino-hydroxy-piperidone moiety of the potent protease inhibitor crocapeptin. J Am Chem Soc 135:16885–16894. doi: 10.1021/ja4047153 CrossRefPubMedGoogle Scholar
  29. Watanabe K, Okuda T, Yokose K, Furumai T, Maruyama HB (1983) Actinosynnema mirum, a new producer of nocardicin antibiotics. J Antibiot 36:321–324CrossRefPubMedGoogle Scholar
  30. Wei GZ, Bai LQ, Yang T, Ma J, Zeng Y, Shen YM, Zhao PJ (2010) A new antitumour ansamitocin from Actinosynnema pretiosum. Nat Prod Res 24:1146–1150. doi: 10.1080/14786410902916552 CrossRefPubMedGoogle Scholar
  31. Yang SW, Chian TM, Terracciano J, Loebenberg D, Chen G, Patel M, Gullo V, Pramanik B, Chu M (2004) Structure elucidation of a new diketopiperazine Sch 725418 from Micromonospora sp. J Antibiot 57:345–347CrossRefPubMedGoogle Scholar
  32. Yu TW, Bai L, Clade D, Hoffmann D, Toelzer S, Trinh KQ, Xu J, Moss SJ, Leistner E, Floss HG (2002) The biosynthetic gene cluster of the maytansinoid antitumor agent ansamitocin from Actinosynnema pretiosum. Proc Natl Acad Sci U S A 99:7968–7973. doi: 10.1073/pnas.092697199 CrossRefPubMedPubMedCentralGoogle Scholar
  33. Zarins-Tutt JS, Barberi TT, Gao H, Mearns-Spragg A, Zhang L, Newman DJ, Goss RJM (2016) Prospecting for new bacterial metabolites: a glossary of approaches for inducing, activating and upregulating the biosynthesis of bacterial cryptic or silent natural products. Nat Prod Rep 33:54–72. doi: 10.1039/C5NP00111K CrossRefPubMedGoogle Scholar
  34. Zheng J, Zhu H, Hong K, Wang Y, Liu P, Wang X, Peng X, Zhu W (2009) Novel cyclic hexapeptides from marine-derived fungus, Aspergillus sclerotiorum PT06-1. Org Lett 11:5262–5265. doi: 10.1021/ol902197z CrossRefPubMedGoogle Scholar

Copyright information

© Springer-Verlag Berlin Heidelberg 2016

Authors and Affiliations

  1. 1.Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical SciencesShandong UniversityJinanPeople’s Republic of China
  2. 2.School of Chemistry and Chemical Engineering|Shandong UniversityJinanPeople’s Republic of China

Personalised recommendations