Abstract
3D cell culture in protein-based hydrogels often begins with chemical functionalization of proteins with cross-linking agents such as methacryloyl or norbornene. An important and variable characteristic of these materials is the degree of functionalization (DoF), which controls the reactivity of the protein for cross-linking and therefore impacts the mechanical properties and stability of the hydrogel. Although 1H NMR has emerged as the most accurate technique for quantifying absolute DoF of chemically modified proteins, colorimetric techniques still dominate in actual use and may be more useful for quantifying fractional or percent DoF. In this work, we sought to develop an optimized colorimetric assay for DoF of common gelatin-based biomaterials and validate it versus NMR; along the way, we developed a set of best practices for both methods and considerations for their most appropriate use. First, the amine-reactive ninhydrin assay was optimized in terms of solvent properties, temperature, ninhydrin concentration, and range of gelatin standards. The optimized assay produced a linear response to protein concentration in a convenient, 96-well plate format and yielded a fractional DoF similar to NMR in most cases. In comparing with NMR, we identified that DoF can be expressed as fractional or absolute, and that fractional DoF can be inaccurate if the amino acid content of the parent protein is not properly accounted for. In summary, the fractional DoF of methacryloyl- and norbornene-functionalized gelatins was quantified by an optimized colorimetric ninhydrin assay and orthogonally by 1H NMR. These methods will be valuable for quality control analysis of protein-based hydrogels and 3D cell culture biomaterials.
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Acknowledgments
We acknowledge Andrew Kinman for testing various versions of the ninhydrin assay and Parastoo Anbaei for aiding in the synthesis of GelNB-NHS. NMR was performed at the University of Virginia Biomolecular Magnetic Resonance facility under the guidance of Dr. Jeffrey Ellena. We thank the faculty of Chemical Engineering, especially the Lampe, Caliari, and Letteri laboratories, for generous access to their lyophilization equipment.
Funding
This work was supported by the National Institute of Biomedical Imaging and Bioengineering (NIBIB) under Award Number U01EB029127 through the National Institutes of Health (NIH), with co-funding from the National Center for Advancing Translational Sciences (NCATS). JMZ was supported in part by the Graduate Research Fellowship Program through the National Science Foundation. ANM was supported in part by a summer undergraduate research award through the Institute for Nanoscale and Quantum Scientific Advanced Research (nanoSTAR) at the University of Virginia. JOC was supported in part by the NIH-funded T32 Biotechnology Training Program at the University of Virginia.
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JM Zatorski, AN Montalbine, J Ortiz-Cárdenas, and RR Pompano designed the experimental approach, interpreted the results, and wrote and edited the manuscript. In addition, JM Zatorski and AN Montalbine optimized the ninhydrin assay conditions, JM Zatorski designed and performed the NMR experiments, and J Ortiz-Cárdenas synthesized GelNB-NHS.
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Zatorski, J.M., Montalbine, A.N., Ortiz-Cárdenas, J.E. et al. Quantification of fractional and absolute functionalization of gelatin hydrogels by optimized ninhydrin assay and 1H NMR. Anal Bioanal Chem 412, 6211–6220 (2020). https://doi.org/10.1007/s00216-020-02792-5
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DOI: https://doi.org/10.1007/s00216-020-02792-5