Development and applications of whole cell biosensors for ecotoxicity testing
Review
First Online:
Received:
Revised:
Accepted:
- 795 Downloads
- 28 Citations
Abstract
Whole cell biosensors are the focus of considerable and increasing interest worldwide as methods for detecting and quantifying environmental toxicity, including biochemical oxygen demand (BOD), heavy metals, antibiotics, pesticides and herbicides. This review follows the development of whole cell biosensors from attempts to utilise changes in cellular metabolism to determine BOD and general toxicity, through the exploitation of unique metabolic pathways to detect specific toxicants, to the increasingly widespread use of genetic engineering to build new, and modify existing, sensing pathways.
Keywords
Microbial biosensors Environmental toxicity Broad response Specific response Engineered responseNotes
Acknowledgement
The authors gratefully acknowledge funding from the New Zealand Foundation for Research, Science and Technology.
References
- 1.Weetall HH (1996) Biosens Bioelectron 11:R1–R4CrossRefGoogle Scholar
- 2.Stoytcheva M, Zlatev R, Velkova Z, Valdez B, Ovalle M, Petkov L (2009) Electrochim Acta 54:1721–1727CrossRefGoogle Scholar
- 3.Lei Y, Mulchandani P, Wang J, Chen W, Mulchandani A (2005) Environ Sci Technol 39:8853–8857CrossRefGoogle Scholar
- 4.Popovtzer R, Neufeld T, Ron EZ, Rishpon J, Shacham-Diamand Y (2006) Sens Actuators B Chem 119:664–672CrossRefGoogle Scholar
- 5.Rawson DM, Willmer AJ, Turner APF (1989) Biosensors 4:299–311CrossRefGoogle Scholar
- 6.D'Souza SF (2001) Biosens Bioelectron 16:337–353CrossRefGoogle Scholar
- 7.O'Sullivan C, Alcock SJ (1999) Biosens Bioelectron 14:541–544CrossRefGoogle Scholar
- 8.Wharfe J (2004) Ecotoxicology 13:413–421CrossRefGoogle Scholar
- 9.Lei Y, Chen W, Mulchandani A (2006) Anal Chim Acta 568:200–210CrossRefGoogle Scholar
- 10.Nakamura H, Shimomura-Shimizu M, Karube I (2008) Adv Biochem Eng Biotechnol 109:351–394Google Scholar
- 11.Eaton AD, Clesceri LS, Greenberg AE (1995) In: Eaton AD, Clesceri LS, Greenberg AE (eds) Standard methods for the examination of water and wastewater, 19th edn. American Public Health Association, WashingtonGoogle Scholar
- 12.Tchobanoglous G, Schroeder E (1987) Water quality. Reading, Addison-WesleyGoogle Scholar
- 13.Bourgeois W, Burgess JE, Stuetz RM (2001) J Chem Technol Biotechnol 76:337–348CrossRefGoogle Scholar
- 14.Karube I, Matsunaga T, Suzuki S (1977) J Solid Phase Biochem 2:97–104Google Scholar
- 15.Rastogi S, Kumar A, Mehra NK, Makhijani SD, Manoharan A, Gangal V, Kumar R (2003) Biosens Bioelectron 18:23–29CrossRefGoogle Scholar
- 16.Lu CY, Qu JY, Jia JB, Qi L, Dong SJ (2005) Chin J Anal Chem 33:609–613Google Scholar
- 17.Dai YJ, Lin L, Li PW, Chen X, Wang XR, Wong KY (2004) Int J Environ Anal Chem 84:607–617CrossRefGoogle Scholar
- 18.Pasco N, Baronian K, Jeffries C, Hay J (2000) Appl Microbiol Biotechnol 53:613–618CrossRefGoogle Scholar
- 19.Yoshida N, Yano K, Morita T, McNiven SJ, Nakamura H, Karube I (2000) Analyst 125:2280–2284CrossRefGoogle Scholar
- 20.Vaiopoulou E, Melidis P, Kampragou E, Aivasidis A (2005) Biosens Bioelectron 21:365–371CrossRefGoogle Scholar
- 21.Morris K, Catterall K, Zhao H, Pasco N, John R (2001) Anal Chim Acta 442:129–139CrossRefGoogle Scholar
- 22.Liu J, Mattiasson B (2002) Water Res 36:3786–3802CrossRefGoogle Scholar
- 23.OECD (1981) OECD guideline 209 - activated sludge, respiration inhibition test, OECD guideline for testing of chemicals. OECD, ParisGoogle Scholar
- 24.Chan CY, Lehmann M, Chan KM, Chan PY, Chan CW, Gruendig B, Kunze G, Renneberg R (2000) Biosens Bioelectron 15:343–353CrossRefGoogle Scholar
- 25.Tag K, Kwong AWK, Lehmann M, Chan CY, Renneberg R, Riedel K, Kunze G (2000) J Chem Technol Biotechnol 75:1080–1082CrossRefGoogle Scholar
- 26.Suriyawattanakul L, Surareungchai W, Sritongkam P, Tanticharoen M, Kirtikara K (2002) Appl Microbiol Biotechnol 59:40–44CrossRefGoogle Scholar
- 27.Kim MN, Park KH (2001) Sens Actuators B Chem 80:9–14CrossRefGoogle Scholar
- 28.Chen JS, Zhang LS, Wang JL (2007) Biomed Environ Sci 20:78–83Google Scholar
- 29.Dhall P, Kumar A, Joshi A, Saxsena TK, Manoharan A, Makhijani SD, Kumar R (2008) Sens Actuators B Chem 133:478–483CrossRefGoogle Scholar
- 30.Kumlanghan A, Kanatharana P, Asawatreratanakul P, Mattiasson B, Thavarungkul P (2008) Enzyme Microb Technol 42:483–491CrossRefGoogle Scholar
- 31.Velling S (2009) Sens Actuators B Chem 141:233–238CrossRefGoogle Scholar
- 32.Liu J, Bjornsson L, Mattiasson B (2000) Biosens Bioelectron 14:883–893CrossRefGoogle Scholar
- 33.Liu J, Olsson G, Mattiasson B (2004) Biosens Bioelectron 20:562–570CrossRefGoogle Scholar
- 34.Liu J, Olsson G, Mattiasson B (2004) Biosens Bioelectron 20:571–578CrossRefGoogle Scholar
- 35.Baronian KHR, Downard AJ, Lowen RK, Pasco N (2002) Appl Microbiol Biotechnol 60:108–113CrossRefGoogle Scholar
- 36.Yoshida N, Hoashi J, Morita T, McNiven S, Nakamura H, Karube I (2001) J Biotechnol 88:269–275CrossRefGoogle Scholar
- 37.Yoshida N, Hoashi J, Morita T, McNiven SJ, Yano K, Yoshida A, Nakamura H, Karube I (2001) Analyst 126:1751–1755CrossRefGoogle Scholar
- 38.Trosok SP, Driscoll BT, Luong JHT (2001) Appl Microbiol Biotechnol 56:550–554CrossRefGoogle Scholar
- 39.Trosok SP, Luong JHT, Juck DF, Driscoll BT (2002) Can J Microbiol 48:418–426CrossRefGoogle Scholar
- 40.Catterall K, Morris K, Gladman C, Zhao HJ, Pasco N, John R (2001) Talanta 55:1187–1194CrossRefGoogle Scholar
- 41.Nakamura H, Suzuki K, Ishikuro H, Kinoshita S, Koizumi R, Okuma S, Gotoh M, Karube I (2007) Talanta 72:210–216CrossRefGoogle Scholar
- 42.Catterall K, Zhao HJ, Pasco N, John R (2003) Anal Chem 75:2584–2590CrossRefGoogle Scholar
- 43.Webber JB, Pasco NF, Noonan M, Hay JM (2011) Appl Microbiol Biotechnol (in press)Google Scholar
- 44.Pasco N, Goonerate R, Daniel R, Czollner A, Scott AJ (2008) Int J Environ Anal Chem 88:1063–1075CrossRefGoogle Scholar
- 45.Karube I, Matsunaga T, Mitsuda S, Suzuki S (1977) Biotechnol Bioeng 19:1535–1547CrossRefGoogle Scholar
- 46.Kim BH, Chang IS, Gil GC, Park HS, Kim HJ (2003) Biotechnol Lett 25:541–545CrossRefGoogle Scholar
- 47.Kim M, Youn SM, Shin SH, Jang JG, Han SH, Hyun MS, Gadd GM, Kim HJ (2003) J Environ Monit 5:640–643CrossRefGoogle Scholar
- 48.Chang IS, Jang JK, Gil GC, Kim M, Kim HJ, Cho BW, Kim BH (2004) Biosens Bioelectron 19:607–613CrossRefGoogle Scholar
- 49.Chang IS, Moon H, Jang JK, Kim BH (2005) Biosens Bioelectron 20:1856–1859CrossRefGoogle Scholar
- 50.Kumlanghan A, Liu J, Thavarungkul P, Kanatharana P, Mattiasson B (2007) Biosens Bioelectron 22:2939–2944CrossRefGoogle Scholar
- 51.Kang KH, Jang JK, Pham TH, Moon H, Chang IS, Kim BH (2003) Biotechnol Lett 25:1357–1361CrossRefGoogle Scholar
- 52.Moon H, Chang IS, Jang JK, Kim KS, Lee J, Lovitt RW, Kim BH (2005) J Microbiol Biotechnol 15:192–196Google Scholar
- 53.Kim BH, Kim HJ, Hyun MS, Park DH (1999) J Microbiol Biotechnol 9:127–131Google Scholar
- 54.Chee GJ, Nomura Y, Ikebukuro K, Karube I (2000) Biosens Bioelectron 15:371–376CrossRefGoogle Scholar
- 55.Lin L, Xiao LL, Huang S, Zhao L, Cui JS, Wang XH, Chen X (2006) Biosens Bioelectron 21:1703–1709CrossRefGoogle Scholar
- 56.Pang HL, Kwok NY, Chow LMC, Yeung CH, Wong KY, Chen X, Wang XR (2007) Sens Actuators B Chem 123:120–126CrossRefGoogle Scholar
- 57.Jiang YQ, Xiao LL, Zhao L, Chen X, Wang XR, Wong KY (2006) Talanta 70:97–103CrossRefGoogle Scholar
- 58.Sadik OA, Wanekaya AK, Andreescu S (2004) J Environ Monit 6:513–522CrossRefGoogle Scholar
- 59.Schöning MJ, Arzdorf M, Mulchandani P, Chen W, Mulchandani A (2003) Sens Actuators B Chem 91:92–97CrossRefGoogle Scholar
- 60.Lei Y, Mulchandani P, Chen W, Mulchandani A (2007) Appl Biochem Biotechnol 136:243–250CrossRefGoogle Scholar
- 61.Wanekaya AK, Chen W, Mulchandani A (2008) J Environ Monit 10:703–712CrossRefGoogle Scholar
- 62.Verma N, Singh M (2005) Biometals 18:121–129CrossRefGoogle Scholar
- 63.Rasooly A, Herold KE (2006) J AOAC Int 89:873–883Google Scholar
- 64.Taranova LA, Fesay AP, Ivashchenko GV, Reshetilov AN, Winther-Nielsen A, Emneus J (2004) Appl Biochem Microbiol 40:404–408CrossRefGoogle Scholar
- 65.Rodriguez-Mozaz S, Marco MP, de Alda MJL, Barcelo D (2004) Anal Bioanal Chem 378:588–598CrossRefGoogle Scholar
- 66.Wang X, Bartha R (1998) In: Wise DL, Trantolo DJ (eds) Remediation of hazardous waste contaminated soils. Dekker, New York, pp 175–197Google Scholar
- 67.Tizzard AC, Bergsma JH, Lloyd-Jones G (2006) Biosens Bioelectron 22:759–763CrossRefGoogle Scholar
- 68.Lanyon YH, Tothill IE, Mascini M (2006) Anal Lett 39:1669–1681CrossRefGoogle Scholar
- 69.Reshetilov AN (2005) Appl Biochem Microbiol 41:442–449CrossRefGoogle Scholar
- 70.Semenchuk IN, Taranova LA, Kalenyuk AA, Il'yasov PV, Reshetilov AN (2000) Appl Biochem Microbiol 36:69–72CrossRefGoogle Scholar
- 71.Taranova L, Semenchuk I, Manolov T, Iliasov P, Reshetilov A (2002) Biosens Bioelectron 17:635–640CrossRefGoogle Scholar
- 72.Dickinson RE, Cicerone RJ (1986) Nature 319:109–115CrossRefGoogle Scholar
- 73.Krebs P, Grisel A (1993) Sens Actuators B Chem 13:155–158CrossRefGoogle Scholar
- 74.Moseley PT, Norris JOW, Williams DE (1991) Techniques and mechanisms in gas sensing. Hilger Bristol, pp 234-259Google Scholar
- 75.Krier A, Sherstnev VV (2000) J Phys D Appl Phys 33:101–106CrossRefGoogle Scholar
- 76.Whitenett G, Stewart G, Atherton K, Culshaw B, Johnstone W (2003) J Opt A Pure Appl Opt 5:S140–S145CrossRefGoogle Scholar
- 77.Wen G, Zheng J, Zhao C, Shuang S, Dong C, Choi MMF (2008) Enzyme Microb Technol 43:257–261CrossRefGoogle Scholar
- 78.Zhao CG, Zheng J, Li HP, Wen GM, He YY, Yang SP, Dong C, Choi MMF (2009) J Appl Microbiol 106:2024–2030CrossRefGoogle Scholar
- 79.Brogan KL, Walt DR (2005) Curr Opin Chem Biol 9:494–500CrossRefGoogle Scholar
- 80.Schoning MJ, Arzdorf M, Mulchandani P, Chen W, Mulchandani A (2003) Sens Actuators B Chem 91:92–97CrossRefGoogle Scholar
- 81.Mulchandani P, Chen W, Mulchandani A (2006) Anal Chim Acta 568:217–221CrossRefGoogle Scholar
- 82.Kumar J, Jha SK, D'Souza SF (2006) Biosens Bioelectron 21:2100–2105CrossRefGoogle Scholar
- 83.Rainina EI, Efremenco EN, Varfolomeyev SD, Simonian AL, Wild JR (1996) Biosens Bioelectron 11:991–1000CrossRefGoogle Scholar
- 84.Guliy OI, Ignatov OV, Makarov OE, Ignatov VV (2003) Biosens Bioelectron 18:1005–1013CrossRefGoogle Scholar
- 85.Lei Y, Mulchandani P, Chen W, Mulchandani A (2006) Sensors 6:466–472CrossRefGoogle Scholar
- 86.Reshetilov AN, Iliasov PV, Knackmuss HJ, Boronin AM (2000) Anal Lett 33:29–41CrossRefGoogle Scholar
- 87.Preuss M, Hall EAH (1995) Anal Chem 67:1940–1949CrossRefGoogle Scholar
- 88.Tillner J, Nau H, Winckler T, Dingermann T (1998) Toxicol In Vitro 12:463–469CrossRefGoogle Scholar
- 89.Tillner J, Winckler T, Dingermann T (1996) Pharmazie 51:902–906Google Scholar
- 90.Buonasera K, Pezzotti G, Scognamiglio V, Tibuzzi A, Giardi MT (2010) J Agric Food Chem 58:5982–5990CrossRefGoogle Scholar
- 91.Giardi MT, Scognamiglio V, Rea G, Rodio G, Antonacci A, Lambreva M, Pezzotti G, Johanningmeier U (2009) Biosens Bioelectron 25:294–300CrossRefGoogle Scholar
- 92.Heitzer A, Applegate B, Kehrmeyer S, Pinkart H, Webb OF, Phelps TJ, White DC, Sayler GS (1998) J Microbiol Meth 33:45–57CrossRefGoogle Scholar
- 93.del Busto-Ramos M, Budzik M, Corvalan C, Morgan M, Turco R, Nivens D, Applegate B (2008) Appl Microbiol Biotechnol 78:573–580CrossRefGoogle Scholar
- 94.Porteous F, Killham K, Meharg A (2000) Chemosphere 41:1549–1554CrossRefGoogle Scholar
- 95.Eldridge ML, Sanseverino J, Layton AC, Easter JP, Schultz TW, Sayler GS (2007) Appl Environ Microbiol 73:6012–6018CrossRefGoogle Scholar
- 96.Radhika V, Milkevitch M, Audige V, Proikas-Cezanne T, Dhanasekaran N (2005) Biotechnol Bioeng 90:29–35CrossRefGoogle Scholar
- 97.Shapiro E, Baneyx F (2007) J Biotechnol 132:487–493CrossRefGoogle Scholar
- 98.Tag K, Riedel K, Bauer HJ, Hanke G, Baronian KHR, Kunze G (2007) Sens Actuators B Chem 122:403–409CrossRefGoogle Scholar
- 99.Axtell CA, Beattie GA (2002) Appl Environ Microbiol 68:4604–4612CrossRefGoogle Scholar
- 100.Fiorentino G, Ronca R, Bartolucci S (2009) Appl Microbiol Biotechnol 82:67–77CrossRefGoogle Scholar
- 101.Tom-Petersen A, Hosbond C, Nybroe O (2001) FEMS Microbiol Ecol 38:59–67CrossRefGoogle Scholar
- 102.Paton GT, Cheewasedtham W, Marr IL, Dawson JJC (2006) Environ Pollut 144:746–751CrossRefGoogle Scholar
- 103.Kong IC (2006) Soil Sediment Contam 15:231–239CrossRefGoogle Scholar
- 104.Li YF, Li FY, Ho CL, Liao VHC (2008) Environ Pollut 152:123–129CrossRefGoogle Scholar
- 105.Wilson T, Hastings JW (1998) Annu Rev Cell Dev Biol 14:197–230CrossRefGoogle Scholar
- 106.Branchini BR, Ablamsky DM, Murtiashaw MH, Uzasci L, Fraga H, Southworth TL (2007) Anal Biochem 361:253–262CrossRefGoogle Scholar
- 107.Shapiro E, Lu C, Baneyx F (2005) Protein Eng Des Sel 18:581–587CrossRefGoogle Scholar
- 108.Kohlmeier S, Mancuso M, Tecon R, Harms H, van der Meer JR, Wells M (2007) Biosens Bioelectron 22:1578–1585CrossRefGoogle Scholar
- 109.Martineau RL, Stout V, Towe BC (2010) Biosens Bioelectron 25:1881–1888CrossRefGoogle Scholar
- 110.Wolber PK, Deininger CA, Southworth MW, Vandekerckhove J, Vanmontagu M, Warren GJ (1986) Proc Natl Acad Sci USA 83:7256–7260CrossRefGoogle Scholar
- 111.Loper JE, Lindow SE (1994) Appl Environ Microbiol 60:1934–1941Google Scholar
- 112.DeAngelis KM, Ji PS, Firestone MK, Lindow SE (2005) Appl Environ Microbiol 71:8537–8547CrossRefGoogle Scholar
- 113.Horry H, Maul A, Thouand G (2007) Sens Actuators B Chem 127:649–657CrossRefGoogle Scholar
- 114.Horry H, Durand MJ, Picart P, Bendriaa L, Daniel P, Thouand U (2004) Environ Toxicol 19:342–345CrossRefGoogle Scholar
- 115.Smutok O, Dmytruk K, Gonchar M, Sibirny A, Schuhmann W (2007) Biosens Bioelectron 23:599–605CrossRefGoogle Scholar
- 116.Freire-Picos MA, Lamas-Maceiras M (2006) Enzyme Microb Technol 40:67–70CrossRefGoogle Scholar
- 117.Paitan Y, Biran I, Shechter N, Biran D, Rishpon J, Ron EZ (2004) Anal Biochem 335:175–183CrossRefGoogle Scholar
- 118.Lehmann M, Riedel K, Adler K, Kunze G (2000) Biosens Bioelectron 15:211–219CrossRefGoogle Scholar
- 119.Scognamiglio V, Raffi D, Lambreva M, Rea G, Tibuzzi A, Pezzotti G, Johanningmeier U, Giardi MT (2009) Anal Bioanal Chem 394:1081–1087CrossRefGoogle Scholar
- 120.Shkil H, Stoica L, Dmytruk K, Smutok O, Gonchar M, Sibirny A, Schuhmann W (2009) Bioelectrochemistry 76:175–179CrossRefGoogle Scholar
- 121.Ito T, Hiroi T, Amaya T, Kaneko S, Araki M, Ohsawa T, Yamamura A, Matsumoto K (2009) Talanta 77:1185–1190CrossRefGoogle Scholar
- 122.Valdman E, Gutz IGR (2008) Sens Actuators B Chem 133:656–663CrossRefGoogle Scholar
- 123.Thanaporn L, Verawat C, Pornpimol S, Mithran S, Werasak S (2008) World J Microbiol Biotechnol 24(12):3049–3055CrossRefGoogle Scholar
- 124.Mirasoli M, Feliciano J, Michelini E, Daunert S, Roda A (2002) Anal Chem 74:5948–5953CrossRefGoogle Scholar
- 125.Tag K, Lehmann M, Chan CY, Renneberg R, Riedel K, Kunze G (2000) Sens Actuators B Chem 67:142–148CrossRefGoogle Scholar
- 126.Chen DD, Cao YB, Liu BH, Kong JL (2002) Anal Bioanal Chem 372:737–739CrossRefGoogle Scholar
- 127.Jia JB, Tang MY, Chen X, Li Q, Dong SJ (2003) Biosens Bioelectron 18:1023–1029CrossRefGoogle Scholar
- 128.Rastogi S, Rathee P, Saxena TK, Mehra NK, Kumar R (2003) Curr Appl Phys 3:191–194CrossRefGoogle Scholar
- 129.Kim MN, Park KH (2004) Sens Actuators B Chem 98:1–4CrossRefGoogle Scholar
- 130.Jang JD, Barford JP Lindawati, Renneberg R (2004) Biosens Bioelectron 19:805–812Google Scholar
- 131.Renneberg T, Kwan RCH, Chan CY, Kunze G, Renneberg R (2004) Microchim Acta 148:235–240CrossRefGoogle Scholar
- 132.Tan TC, Lim EWC (2005) Sens Actuators B Chem 107:546–551CrossRefGoogle Scholar
- 133.Gutnik GA, Reznichenko LS, Vember VV, Gruzina TG (2009) J Water Chem Technol 31:131–134CrossRefGoogle Scholar
- 134.Seo KS, Choo KH, Chang HN, Park JK (2009) Appl Microbiol Biotechnol 83:217–223CrossRefGoogle Scholar
- 135.Morris K, Zhao H, John R (2003) In: Brebbia CA, Almorza D, Sales D (eds) Water pollution VII. Modelling, measuring and prediction. WIT Press, Southampton, pp 379-389Google Scholar
- 136.Pasco N, Baronian KB, Jeffries C, Webber J, Hay J (2004) Biosens Bioelectron 20:524–532CrossRefGoogle Scholar
- 137.Morris K, Zhao HJ, John R (2005) Aust J Chem 58:237–245CrossRefGoogle Scholar
- 138.Yoshida N, McNiven SJ, Yoshida A, Morita T, Nakamura H, Karube I (2001) Field Anal Chem Technol 5:222–227CrossRefGoogle Scholar
- 139.Sakaguchi T, Morioka Y, Yamasaki M, Iwanaga J, Beppu K, Maeda H, Morita Y, Tamiya E (2007) Biosens Bioelectron 22:1345–1350CrossRefGoogle Scholar
- 140.Kwok NY, Dong SJ, Lo WH, Wong KY (2005) Sens Actuators B Chem 110:289–298CrossRefGoogle Scholar
- 141.Nakamura H, Kobayashi S, Hirata Y, Suzuki K, Mogi Y, Karube I (2007) Anal Biochem 369:168–174CrossRefGoogle Scholar
- 142.Nakamura H, Mogi Y, Hattori H, Kita Y, Hattori D, Yoshimura A, Karube I (2008) Anal Chim Acta 620:127–133CrossRefGoogle Scholar
Copyright information
© Springer-Verlag 2011