Archives of Microbiology

, Volume 200, Issue 5, pp 835–840 | Cite as

Whole-genome sequence and genome annotation of Xanthomonas citri pv. mangiferaeindicae, causal agent of bacterial black spot on Mangifera indica

  • Feng Liu
  • Xiong-chang Ou
  • Ru-lin Zhan
Short Communication


A newly isolated strain XC01 was identified as Xanthomonas citri pv. mangiferaeindicae, isolated from an infected mango fruit in Guangxi, China. The complete genome sequence of XC01 was carried out using the PacBio RSII platform. The genome contains a circular chromosome with 3,865,165 bp, 3442 protein-coding genes, 53 tRNAs, and 2 rRNA operons. Phylogenetic analysis revealed that this pathogen is very close to the soybeans bacterial pustule pathogen X. citri pv. glycines CFBP 2526, with a completely different host range. The genome sequence of XC01 may shed a highlight genes with a demonstrated or proposed role in on the pathogenesis.


Xanthomonas citri pv. mangiferaeindicae Mango Complete genome sequence 



This research was supported by the Chinese Special Fund of Basic Scientific Research Projects for State Level and Public Welfare-Scientific Research Institutes (No. 1630062014007), the special fund for Agroscientific Research in the Public Interest (No. 201203092), and Hainan Province Science Foundation (No. 20163109).

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Copyright information

© Springer-Verlag GmbH Germany, part of Springer Nature 2018

Authors and Affiliations

  1. 1.Southern Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Key Laboratory of Tropical Fruit Biology, Ministry of AgricultureZhanjiangChina

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