Abstract
Key message
Analysis of drought-related genes in cassava shows the involvement of MeSPL9 in drought stress tolerance and overexpression of a dominant-negative form of this gene demonstrates its negative roles in drought stress resistance.
Abstract
Drought stress severely impairs crop yield and is considered a primary threat to food security worldwide. Although the SQUAMOSA promoter binding protein-like 9 (SPL9) gene participates extensively in numerous developmental processes and in plant response to abiotic stimuli, its role and regulatory pathway in cassava (Manihot esculenta) response to the drought condition remain elusive. In the current study, we show that cassava SPL9 (MeSPL9) plays negative roles in drought stress resistance. MeSPL9 expression was strongly repressed by drought treatment. Overexpression of a dominant-negative form of miR156-resistant MeSPL9, rMeSPL9-SRDX, in which a 12-amino acid repressor sequence was fused to rMeSPL9 at the C terminus, conferred drought tolerance without penalizing overall growth. rMeSPL9-SRDX-overexpressing lines not only exhibited increased osmoprotectant metabolites including proline and anthocyanin, but also accumulated more endogenous jasmonic acid (JA) and soluble sugars. Transcriptomic and real-time PCR analysis suggested that differentially expressed genes were involved in sugar or JA biosynthesis, signaling, and metabolism in transgenic cassava under drought conditions. Exogenous application of JA further confirmed that JA conferred improved drought resistance and promoted stomatal closure in cassava leaves. Taken together, our findings suggest that MeSPL9 affects drought resistance by modulating protectant metabolite levels and JA signaling, which have substantial implications for engineering drought tolerant crops.
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References
Acosta IF, Farmer EE (2010) Jasmonates. Arabidopsis Book 8:e0129. https://doi.org/10.1199/tab.0129
Ahmad P, Rasool S, Gul A, Sheikh SA, Akram NA, Ashraf M, Kazi AM, Gucel S (2016) Jasmonates: multifunctional roles in stress tolerance. Front Plant Sci 7:813
An D, Ma Q, Wang H, Yang J, Zhou W, Zhang P (2017) Cassava C-repeat binding factor 1 gene responds to low temperature and enhances cold tolerance when overexpressed in Arabidopsis and cassava. Plant Mol Biol 94:109–124
Brugiere N, Zhang W, Xu Q, Scolaro EJ, Lu C, Kahsay RY, Kise R, Trecker L, Williams RW, Hakimi S, Niu X, Lafitte R, Habben JE (2017) Overexpression of RING domain E3 Ligase ZmXerico1 confers drought tolerance through regulation of ABA homeostasis. Plant Physiol 175:1350–1369
Castellarin SD, Pfeiffer A, Sivilotti P, Degan M, Peterlunger E, Gaspero G (2007) Transcriptional regulation of anthocyanin biosynthesis in ripening fruits of grapevine under seasonal water deficit. Plant, Cell Environ 30:1381–1399
Chen X, Xia J, Xia Z, Zhang H, Zeng C, Lu C, Zhang W, Wang W (2015) Potential functions of microRNAs in starch metabolism and development revealed by miRNA transcriptome profiling of cassava cultivars and their wild progenitor. BMC Plant Biol 15:33
Cheng Z, Lei N, Li S, Liao W, Shen J, Peng M (2019) The regulatory effects of MeTCP4 on cold stress tolerance in Arabidopsis thaliana: a transcriptome analysis. Plant Physiol Biochem: PPB 138:9–16
Cui LG, Shan JX, Shi M, Gao JP, Lin HX (2015) The miR156-SPL9-DFR pathway coordinates the relationship between development and abiotic stress tolerance in plants. Plant J: Cell Mol Biol 80:1108–1117
Dahro B, Wang F, Peng T, Liu JH (2016) PtrA/NINV, an alkaline/neutral invertase gene of Poncirus trifoliata, confers enhanced tolerance to multiple abiotic stresses by modulating ROS levels and maintaining photosynthetic efficiency. BMC Plant Biol 16:76
Daszkowska-Golec A, Szarejko I (2013) Open or close the gate - stomata action under the control of phytohormones in drought stress conditions. Front Plant Sci 4:138
De Domenico S, Bonsegna S, Horres R, Pastor V, Taurino M, Poltronieri P, Imtiaz M, Kahl G, Flors V, Winter P, Santino A (2012) Transcriptomic analysis of oxylipin biosynthesis genes and chemical profiling reveal an early induction of jasmonates in chickpea roots under drought stress. Plant Physiol Biochem: PPB 61:115–122
Dobra J, Vankova R, Havlova M, Burman AJ, Libus J, Storchova H (2011) Tobacco leaves and roots differ in the expression of proline metabolism-related genes in the course of drought stress and subsequent recovery. J Plant Physiol 168:1588–1597
Dyson BC, Allwood JW, Feil R, Xu Y, Miller M, Bowsher CG, Goodacre R, Lunn JE, Johnson GN (2015) Acclimation of metabolism to light in Arabidopsis thaliana: the glucose 6-phosphate/phosphate translocator GPT2 directs metabolic acclimation. Plant, Cell Environ 38:1404–1417
El-Sharkawy MA (2004) Cassava biology and physiology. Plant Mol Biol 56:481–501
Fabregas N, Lozano-Elena F, Blasco-Escamez D, Tohge T, Martinez-Andujar C, Albacete A, Osorio S, Bustamante M, Riechmann JL, Nomura T, Yokota T, Conesa A, Alfocea FP, Fernie AR, Cano-Delgado AI (2018) Overexpression of the vascular brassinosteroid receptor BRL3 confers drought resistance without penalizing plant growth. Nat Commun 9:4680
Feyissa BA, Arshad M, Gruber MY, Kohalmi SE, Hannoufa A (2019) The interplay between miR156/SPL13 and DFR/WD40-1 regulate drought tolerance in alfalfa. BMC Plant Biol 19:434
Foley JA, Ramankutty N, Brauman KA, Cassidy ES, Gerber JS, Johnston M, Mueller ND, O’Connell C, Ray DK, West PC, Balzer C, Bennett EM, Carpenter SR, Hill J, Monfreda C, Polasky S, Rockstrom J, Sheehan J, Siebert S, Tilman D, Zaks DP (2011) Solutions for a cultivated planet. Nature 478:337–342
Fu L, Ding Z, Han B, Hu W, Li Y, Zhang J (2016) Physiological investigation and transcriptome analysis of polyethylene glycol (PEG)-induced dehydration stress in cassava. Int J Mol Sci 17:283
Fu J, Wu H, Ma S, Xiang D, Liu R, Xiong L (2018) OsJAZ1 Attenuates drought resistance by regulating JA and ABA signaling in rice. Front Plant Sci 8:2108
Gou JY, Felippes FF, Liu CJ, Weigel D, Wang JW (2011) Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor. Plant Cell 23:1512–1522
Guo AY, Zhu QH, Gu X, Ge S, Yang J, Luo J (2008) Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family. Gene 418:1–8
Guo Z, Fujioka S, Blancaflor EB, Miao S, Gou X, Li J (2010) TCP1 modulates brassinosteroid biosynthesis by regulating the expression of the key biosynthetic gene DWARF4 in Arabidopsis thaliana. Plant Cell 22:1161–1173
Guo L, Devaiah SP, Narasimhan R, Pan X, Zhang Y, Zhang W, Wang X (2012) Cytosolic glyceraldehyde-3-phosphate dehydrogenases interact with phospholipase Ddelta to transduce hydrogen peroxide signals in the Arabidopsis response to stress. Plant Cell 24:2200–2212
Gupta A, Hisano H, Hojo Y, Matsuura T, Ikeda Y, Mori IC, Senthil-Kumar M (2017) Global profiling of phytohormone dynamics during combined drought and pathogen stress in Arabidopsis thaliana reveals ABA and JA as major regulators. Sci Rep 7:4017
Han GZ (2017) Evolution of jasmonate biosynthesis and signaling mechanisms. J Exp Bot 68:1323–1331
Hiratsu K, Matsui K, Koyama T, Ohme-Takagi M (2003) Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant J: Cell Mol Biol 34:733–739
Kim D, Langmead B, Salzberg SL (2015) HISAT: a fast spliced aligner with low memory requirements. Nat Methods 12:357–360
Koyama T, Furutani M, Tasaka M, Ohme-Takagi M (2007) TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. Plant Cell 19:473–484
Krasensky J, Jonak C (2012) Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks. J Exp Bot 63:1593–1608
Li B, Dewey CN (2011) RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinform 12:323
Li S, Yu X, Cheng Z, Yu X, Ruan M, Li W, Peng M (2017a) Global gene expression analysis reveals crosstalk between response mechanisms to cold and drought stresses in cassava seedlings. Front Plant Sci 8:1259
Li S, Yu X, Lei N, Cheng Z, Zhao P, He Y, Wang W, Peng M (2017b) Genome-wide identification and functional prediction of cold and/or drought-responsive lncRNAs in cassava. Sci Rep 7:45981
Li RJ, Li LM, Liu XL, Kim JC, Jenks MA, Lu S (2019a) Diurnal regulation of plant epidermal wax synthesis through antagonistic roles of the transcription factors SPL9 and DEWAX. Plant Cell 31:2711–2733
Li X, Wei W, Li F, Zhang L, Deng X, Liu Y, Yang S (2019b) The plastidial glyceraldehyde-3-phosphate dehydrogenase is critical for abiotic stress response in wheat. Int J Mol Sci 20:1104
Liao W, Wang G, Li Y, Wang B, Zhang P, Peng M (2016) Reactive oxygen species regulate leaf pulvinus abscission zone cell separation in response to water-deficit stress in cassava. Sci Rep 6:21542
LiCheng SZ, Peng M (2020) Genome-wide identification of miRNAs targets involved in cold response in cassava. Plant Omics J 13:57–64
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25:402–408
Lotkowska ME, Tohge T, Fernie AR, Xue GP, Balazadeh S, Mueller-Roeber B (2015) The Arabidopsis transcription factor MYB112 promotes anthocyanin formation during salinity and under high light stress. Plant Physiol 169:1862–1880
Love MI, Huber W, Anders S (2014) Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol 15:550
Maloney VJ, Park JY, Unda F, Mansfield SD (2015) Sucrose phosphate synthase and sucrose phosphate phosphatase interact in planta and promote plant growth and biomass accumulation. J Exp Bot 66:4383–4394
Mao YB, Liu YQ, Chen DY, Chen FY, Fang X, Hong GJ, Wang LJ, Wang JW, Chen XY (2017) Jasmonate response decay and defense metabolite accumulation contributes to age-regulated dynamics of plant insect resistance. Nat Commun 8:13925
Naing AH, Park KI, Ai TN, Chung MY, Han JS, Kang YW, Lim KB, Kim CK (2017) Overexpression of snapdragon delila (Del) gene in tobacco enhances anthocyanin accumulation and abiotic stress tolerance. BMC Plant Biol 17:65
Okogbenin E, Setter TL, Ferguson M, Mutegi R, Ceballos H, Olasanmi B, Fregene M (2013) Phenotypic approaches to drought in cassava: review. Front Physiol 4:93
Ozturk B, Yildiz K, Kucuker E (2015) Effect of pre-harvest methyl jasmonate treatments on ethylene production, water-soluble phenolic compounds and fruit quality of Japanese plums. J Sci Food Agric 95:583–591
Pertea M, Pertea GM, Antonescu CM, Chang TC, Mendell JT, Salzberg SL (2015) StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Nat Biotechnol 33:290–295
Pinheiro C, Antonio C, Ortuno MF, Dobrev PI, Hartung W, Thomas-Oates J, Ricardo CP, Vankova R, Chaves MM, Wilson JC (2011) Initial water deficit effects on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance: metabolic reorganization prior to early stress responses. J Exp Bot 62:4965–4974
Prabhakar V, Lottgert T, Geimer S, Dormann P, Kruger S, Vijayakumar V, Schreiber L, Gobel C, Feussner K, Feussner I, Marin K, Staehr P, Bell K, Flugge UI, Hausler RE (2010) Phosphoenolpyruvate provision to plastids is essential for gametophyte and sporophyte development in Arabidopsis thaliana. Plant Cell 22:2594–2617
Ray DK, Gerber JS, MacDonald GK, West PC (2015) Climate variation explains a third of global crop yield variability. Nat Commun 6:5989
Riemann M, Dhakarey R, Hazman M, Miro B, Kohli A, Nick P (2015) Exploring jasmonates in the hormonal network of drought and salinity responses. Front Plant Sci 6:1077
Ruan MB, Guo X, Wang B, Yang YL, Li WQ, Yu XL, Zhang P, Peng M (2017) Genome-wide characterization and expression analysis enables identification of abiotic stress-responsive MYB transcription factors in cassava (Manihot esculenta). J Exp Bot 68:3657–3672
Savchenko T, Kolla VA, Wang CQ, Nasafi Z, Hicks DR, Phadungchob B, Chehab WE, Brandizzi F, Froehlich J, Dehesh K (2014) Functional convergence of oxylipin and abscisic acid pathways controls stomatal closure in response to drought. Plant Physiol 164:1151–1160
Seki M, Umezawa T, Urano K, Shinozaki K (2007) Regulatory metabolic networks in drought stress responses. Curr Opin Plant Biol 10:296–302
Sperdouli I, Moustakas M (2012) Interaction of proline, sugars, and anthocyanins during photosynthetic acclimation of Arabidopsis thaliana to drought stress. J Plant Physiol 169:577–585
Stief A, Altmann S, Hoffmann K, Pant BD, Scheible WR, Baurle I (2014) Arabidopsis miR156 regulates tolerance to recurring environmental stress through SPL transcription factors. Plant Cell 26:1792–1807
Suhita D, Raghavendra AS, Kwak JM, Vavasseur A (2004) Cytoplasmic alkalization precedes reactive oxygen species production during methyl jasmonate- and abscisic acid-induced stomatal closure. Plant Physiol 134:1536–1545
Szabados L, Savoure A (2010) Proline: a multifunctional amino acid. Trends Plant Sci 15:89–97
Utsumi Y, Tanaka M, Morosawa T, Kurotani A, Yoshida T, Mochida K, Matsui A, Umemura Y, Ishitani M, Shinozaki K, Sakurai T, Seki M (2012) Transcriptome analysis using a high-density oligomicroarray under drought stress in various genotypes of cassava: an important tropical crop. DNA Res: Int J Rapid Publ Rep Genes Genomes 19:335–345
Visentin I, Pagliarani C, Deva E, Caracci A, Tureckova V, Novak O, Lovisolo C, Schubert A, Cardinale F (2020) A novel strigolactone-miR156 module controls stomatal behaviour during drought recovery. Plant, Cell Environ 43:1613–1624
Wang JW, Schwab R, Czech B, Mica E, Weigel D (2008) Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana. Plant Cell 20:1231–1243
Wang Y, Liu W, Wang X, Yang R, Wu Z, Wang H, Wang L, Hu Z, Guo S, Zhang H, Lin J, Fu C (2020) MiR156 regulates anthocyanin biosynthesis through SPL targets and other microRNAs in poplar. Hortic Res 7:118
Wasternack C, Hause B (2013) Jasmonates: biosynthesis, perception, signal transduction and action in plant stress response, growth and development: an update to the 2007 review in annals of botany. Ann Bot 111:1021–1058
Wasternack C, Strnad M (2016) Jasmonate signaling in plant stress responses and development - active and inactive compounds. New Biotechnol 33:604–613
Wei T, Wang Y, Xie Z, Guo D, Chen C, Fan Q, Deng X, Liu JH (2019) Enhanced ROS scavenging and sugar accumulation contribute to drought tolerance of naturally occurring autotetraploids in Poncirus trifoliata. Plant Biotechnol J 17:1394–1407
Wei Y, Liu W, Hu W, Yan Y, Shi H (2020) The chaperone MeHSP90 recruits MeWRKY20 and MeCatalase1 to regulate drought stress resistance in cassava. New Phytol 226:476–491
Wingler A, Roitsch T (2008) Metabolic regulation of leaf senescence: interactions of sugar signalling with biotic and abiotic stress responses. Plant Biol 10(Suppl 1):50–62
Wu G, Poethig RS (2006) Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3. Development 133:3539–3547
Wu G, Park MY, Conway SR, Wang JW, Weigel D, Poethig RS (2009) The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis. Cell 138:750–759
Xing Q, Liao J, Cao S, Li M, Lv T, Qi H (2020) CmLOX10 positively regulates drought tolerance through jasmonic acid -mediated stomatal closure in oriental melon (Cucumis melo var. makuwa Makino). Sci Rep 10:17452
Ye BB, Shang GD, Pan Y, Xu ZG, Zhou CM, Mao YB, Bao N, Sun L, Xu T, Wang JW (2020) AP2/ERF Transcription factors integrate age and wound signals for root regeneration. Plant Cell 32:226–241
Zhang P, Potrykus I, Puonti-Kaerlas J (2000) Efficient production of transgenic cassava using negative and positive selection. Transgenic Res 9:405–415
Acknowledgements
This work was supported by the Hainan Provincial Natural Science Foundation of China (320MS097), the National Key Research and Development Program of China (2019YFD1001105, 2019YFD1000500, 2018YFD1000500), and the Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences (1630052021026).
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Natural Science Foundation of Hainan Province, 320MS097, Shuxia Li
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M.P. and X.Y. designed the experiments; S.L., Z.L., S.D., X.Y., P.Z., Z.C., and W.L. conducted the experiments; S.L., X.Y., and Z.C. wrote the manuscript. We would like to thank TopEdit (www.topeditsci.com) for its linguistic assistance during the preparation of this manuscript.
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Li, S., Cheng, Z., Li, Z. et al. MeSPL9 attenuates drought resistance by regulating JA signaling and protectant metabolite contents in cassava. Theor Appl Genet 135, 817–832 (2022). https://doi.org/10.1007/s00122-021-04000-z
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DOI: https://doi.org/10.1007/s00122-021-04000-z