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Archives of Virology

, Volume 124, Issue 3–4, pp 279–289 | Cite as

The 3′ terminal sequence of a human astrovirus

  • M. M. Willcocks
  • M. J. Carter
Original Papers

Summary

We have determined the sequence for 1,000 bases from the 3′ terminus of a human astrovirus serotype 1 isolated in Newcastle. This is the first sequence reported for a representative of this virus family. We find one open reading frame which terminates 83 bases from a poly A tail. The 3′ non-coding-region has similarities to some picornavirus termini. However the amino acids specified by the coding region have no significant homology to the picornavirus protein 3D, encoded at the 3′ terminus of these viruses. Northern blot analysis of intracellular virus-specific RNAs revealed one size of transcript which corresponded to full-length virus RNA. Available data thus indicate that astroviruses may resemble picornaviruses in replication strategy.

Keywords

Infectious Disease Blot Analysis Northern Blot Northern Blot Analysis Significant Homology 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag 1992

Authors and Affiliations

  • M. M. Willcocks
    • 1
  • M. J. Carter
    • 1
  1. 1.Division of VirologyNew Medical SchoolNewcastle-upon-TyneUK

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