On the dynamics of a simple biochemical control circuit
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Abstract
The quantitative dynamics of a biochemical control circuit that regulates enzyme or protein synthesis by end-product feedback is analyzed. We first study a simplified repressible system, which is known to exhibit either a steady state or an oscillatory solution. By showing the analogy of thisn-dimensional system with a time-delay equation for a single variable the mechanism of the self-sustained oscillations becomes transparent. In a more sophisticated system we will find as well either steady state or oscillatory solutions. We determine the role of the parameters with respect to stability and frequency. The most general case will be treated by means of the concept of Lyapunov exponents.
Keywords
Enzyme Steady State Protein Synthesis Lyapunov Exponent Single Variable
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References
- Atkinson, D.E.: Biological feedback control at the molecular level. Science150, 851–857 (1965)Google Scholar
- Briggs, G.E., Haldane, J.B.S.: A note on the kinetics of enzyme action. Biochem. J.19, 338–339 (1925)Google Scholar
- Goodwin, B.: Temporal organization in cells: a dynamic theory of cellular control processes. London: Academic Press 1963Google Scholar
- Goodwin, B., Cohen, M.H.: A phase-shift model for the spatial and temporal organization of developing systems. J. Theor. Biol.25, 49–107 (1969)Google Scholar
- Griffith, J.S.: Mathematics of cellular control processes. I. Negative feedback to one gene. J. Theor. Biol.20, 202–216 (1968)Google Scholar
- Haken, H.: Advanced synergetics. Berlin, Heidelberg, New York: Springer 1983aGoogle Scholar
- Haken, H.: At least one Lyapunov exponent vanishes if the trajectory of an attractor does not contain a fixed point. Physics L94A, No. 2, 71. Berlin, Heidelberg, New York: Springer 1983bGoogle Scholar
- Hastings, S., Tyson, J., Webster, D.: Existence of periodic solutions for negative feedback control systems. J. Diff. Eq.25, 39–64 (1977)Google Scholar
- Haubs, G.: Lyapunov exponents. Talk given at the meeting in Dötingen (1982)Google Scholar
- Hopf, E.: Abzweigung einer periodischen Lösung von einer stationären Lösung eines Differentialgleichungssystems. Ber. Math.-Phys K1. Sachs. Akad. Wiss. Leipzig94, 1–22 (1942)Google Scholar
- Hunding, A.: Limit cycles in enzyme systems with nonlinear feedback. Biophys. Struct. Mech.1, 47–54 (1974)Google Scholar
- Jacob, F., Monod, J.: On the nature of allosteric transitions. A plausible model. J. Mol. Biol.3, 318–356 (1961)Google Scholar
- Marsden, J.E., McCracken, M.: The Hopf bifurcation and its applications. Appl. Math. Sci. Vol. 19. Berlin, Heidelberg, New York: Springer 1976Google Scholar
- McDonald, N.: Time lags in biological models. Lecture Notes Biomathematics, Vol. 27. Berlin, Heidelberg, New York: Springer 1970Google Scholar
- Michaelis, L., Menten, M.L.: Die Kinetik der Invertinwirkung. Biochem. Z.49, 333–369 (1913)Google Scholar
- Morales, M., McKay, D.: Biochemical oscillations in “controlled” systems. Biophys. J.7, 621–625 (1967)Google Scholar
- Murray, J.D.: Lect. on Nonl.-Diff.-Eq. Mod. in Biology. Oxford: Clarendon Press 1977Google Scholar
- Othmer, H.G.: The qualitative dynamics of a class of biochemical control circuits. J. Math. Biol.3, 53–78 (1976)Google Scholar
- Rapp, P.E.: A theoretical investigation of a large class of biochemical oscillators. Math. Biosci.25, 165–188 (1975)Google Scholar
- Rapp, P.E.: An atlas of cellular oscillations. J. Exp. Biol.81, 281–306 (1979)Google Scholar
- Roberts, D.V.: Enzyme kinetics. Cambridge: Cambridge University Press 1977Google Scholar
- Tyson, J.J., Othmer, H.G.: The dynamics of feedback control circuits in biochemical pathways. Progr. Theor. Biol.5, 1–62 (1978)Google Scholar
- Walter, C.F.: The occurrence and significance of limit cycle behaviour in controlled biochemical systems. J. Theor. Biol.27, 259–272 (1970)Google Scholar
- Yagil, G., Yagil, E.: On the relation between effector concentration and the rate induced enzyme synthesis. Biophys. J.11, 11–27 (1971)Google Scholar
- Yates, R.A., Pardee, A.: Control of pyramidine biosynthesis in E. coli by feedback mechanisms. J. Biol. Chem.221, 757–765 (1956)Google Scholar
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