Euphytica

, Volume 76, Issue 1–2, pp 81–87 | Cite as

Orientation and integration of the classical and molecular genetic maps of chromosome 11 in rice

  • M. L. P. Abenes
  • R. E. Tabien
  • S. R. McCouch
  • R. Ikeda
  • P. Ronald
  • G. S. Khush
  • N. Huang
Article

Summary

The classical genetic map and molecular map of rice chromosome 11 were oriented to facilitate the use of these maps for genetic studies and rice improvement. Three morphological markers (d-27, z-2, and la) were crossed to a rice breeding line, IRBB21, which has the Xa-21 gene for bacterial blight resistance. Three F2 populations were analyzed with RFLP markers known to be located on chromosome 11. Segregation analysis of molecular markers and morphological markers was used to construct an RFLP map for each population. The recombination frequency between markers varied from population to population although the marker order on the maps was the same for all three populations. Based on a common set of markers mapped in the three populations, an integrated map was generated consisting of both RFLP and morphological markers. The genetic distance between markers on this map was determined by taking a weighted average of the data from the three populations. The oriented map serves as a bridge to understand the relationship between the classical and molecular linkage maps. Based on this information, the location of several genes on the classical map can be approximated with respect to RFLP markers without having to map them directly.

Key words

linkage molecular markers morphological mutant markers Oryza sativa rice RFLP 

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Copyright information

© Kluwer Academic Publishers 1994

Authors and Affiliations

  • M. L. P. Abenes
    • 1
  • R. E. Tabien
    • 1
  • S. R. McCouch
    • 1
  • R. Ikeda
    • 1
  • P. Ronald
    • 1
  • G. S. Khush
    • 1
  • N. Huang
    • 1
  1. 1.Division of Plant Breeding, Genetics and BiochemistryInternational Rice Research InstituteManilaPhilippines

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