Plant Molecular Biology

, Volume 21, Issue 6, pp 1109–1119 | Cite as

Transposition pattern of a modified Ds element in tomato

  • Caius M. T. Rommens
  • Tichafa R. I. Munyikwa
  • Bert Overduin
  • H. John J. Nijkamp
  • Jacques Hille
Research Articles

Abstract

Several aspects of transposition of an in vitro modified Ds element are described. This Ds element, designated ds-r, is equipped with bacterial plasmid sequences and can, therefore, be rescued from the plant genome. Our results indicate that the Ds-r element has a ‘late’ timing of transposition from T-DNAs. This feature of the element might be advantageous for tagging experiments because it leads to independently transposed germinally transmitted elements. Furthermore, it is shown that Ds-r transposition generates clusters of insertions, indicating that ‘genes to be tagged’ should be located in genomic regions covered by insertions.

Key words

transposition Ac/Ds transgenic tomato plants RFLP mapping plasmid rescue 

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References

  1. 1.
    Altschul SF, Gish W, Miller W, Myers EW, Lipman J: Basic local alignment search tool. J Mol Biol 215: 403–410 (1990).CrossRefPubMedGoogle Scholar
  2. 2.
    Antequera F, Bird AB: Unmethylated CpG islands associated with genes in higher plant DNA. EMBO J 7: 2295–2299 (1988).Google Scholar
  3. 3.
    Athma P, Grotewold E, Peterson T: Insertional mutagenesis of the maize P gene by intragenic transposition of Ac. Genetics 131: 199–209 (1992).PubMedGoogle Scholar
  4. 4.
    Baker B, Schell J, Lörz H, Fedoroff NV: Transposition of the maize controlling element Activator in tobacco. Proc Natl Acad Sci USA 83: 4844–4848 (1986).Google Scholar
  5. 5.
    Ballcells L, Swinburne J, Coupland G: Transposons as tools for the isolation of plant genes. TIBTECH 9: 31–37 (1991).Google Scholar
  6. 6.
    Belzile F, Yoder JI: Pattern of somatic transposition in a high copy Ac tomato line. Plant J 2: 173–179 (1992).CrossRefPubMedGoogle Scholar
  7. 7.
    Bernatzky R, Tanksley SD: Towards a saturated linkage map of tomato based on isozymes and random cDNA sequences. Genetics 112: 887–898 (1986).Google Scholar
  8. 8.
    Blackman RK, Gelbart WM: The transposable element hobo of Drosophila melanogaster. In: Berg DE, Howe MM (eds) Mobile DNA, pp. 523–529. American Society for Microbiology, Washington DC (1989).Google Scholar
  9. 9.
    Brink RA, Williams E: Mutable R-navajo alleles of cyclic origin in maize. Genetics 73: 273–296 (1973).Google Scholar
  10. 10.
    Calvi BR, Hong TJ, Findley SD, Gelbart WM: Evidence of a common evolutionary origin of inverted repeat transposons in Drosophila and plants: hobo, Activator and Tam3. Cell 66: 465–471 (1991).CrossRefPubMedGoogle Scholar
  11. 11.
    Chen J, Varner JE: An extracellular matrix protein in plants: Characterization of a genomic clone for carrot extensin. EMBO J 4: 2145–2151 (1985).Google Scholar
  12. 12.
    Chen J, Greenblatt IM, Dellaporta SL: Transposition of Ac from the P locus of maize into unreplicated chromosomal sites. Genetics 117: 109–116 (1987).PubMedGoogle Scholar
  13. 13.
    Chen J, Greenblatt IM, Dellaporta SL: Molecular analysis of Ac transposition and DNA replication. Genetics 130: 665–676 (1992).PubMedGoogle Scholar
  14. 14.
    Coen ES, Robbins TP, Almeida J, Hudson A, Carpenter R: Consequences and mechanisms of transposition in Antirrhinum majus. In: Berg DE, Howe MM (eds) Mobile DNA, pp. 413–436. American Society for Microbiology, Washington DC (1989).Google Scholar
  15. 15.
    Dash S, Peterson PA: Chromosome constructs for transposon tagging of desirable genes in different parts of the maize genome. Maydica 34: 247–261 (1989).Google Scholar
  16. 16.
    Dennis ES, Gerlach W, Peacock WJ: Excision of the Ds controlling element from the Adh1 gene of maize. Maydica 31: 47–57 (1986).Google Scholar
  17. 17.
    Dooner HK, Weck E, Adams S, Ralston E, Favreau M, English J: A molecular genetic analysis of insertions in the bronze locus in maize. Mol Gen Genet 200: 240–246 (1985).Google Scholar
  18. 18.
    Dooner HK, English J, Ralston E, Weck E: A single genetic unit specifies two transposition functions in the maize element Activator. Science 234: 210–211 (1986).Google Scholar
  19. 19.
    Dooner HK, Belachew A: Transposition pattern of the maize element Ac from the bz-m2(Ac) allele. Genetics 122: 447–457 (1989).Google Scholar
  20. 20.
    Dooner HK, Keller J, Harper E, Ralston E: Variable patterns of transposition of the maize element Activator in tobacco. Plant Cell 3: 473–482 (1991).CrossRefPubMedGoogle Scholar
  21. 21.
    Döring HP, Starlinger P: Barbara McClintock's controlling elements: now at the DNA level. Cell 39: 253–259 (1984).CrossRefPubMedGoogle Scholar
  22. 22.
    Döring HP, Tillmann E, Starlinger P: DNA sequence of the maize transposable element Dissociation. Nature 307: 127–130 (1984).PubMedGoogle Scholar
  23. 23.
    Döring HP: Tagging genes with maize transposable elements. An overview. Maydica 34: 73–88 (1989).Google Scholar
  24. 24.
    Engels WR, Johnson-Schlitz DM, Eggleston WB, Sved J: High frequency P element loss in Drosophila is homolog dependent. Cell 62: 515–526 (1990).CrossRefPubMedGoogle Scholar
  25. 25.
    Fedoroff N, Wessler S, Shure M: Isolation of the transposable maize controlling elements Ac and Ds. Cell 35: 243–251 (1983).CrossRefPubMedGoogle Scholar
  26. 26.
    Fedoroff NV: Maize transposable elements. In: Berg DE, Howe MM (eds) Mobile DNA, pp. 375–411. American Society for Microbiology, Washington DC (1989).Google Scholar
  27. 27.
    Fitzmaurice WP, Lehman LJ, Nguyen LV, Thompson WF, Wernsman EA, Conkling MA: Development and characterization of a generalized gene tagging system for higher plants using an engineered maize transposon Ac. Plant Mol Biol 20: 177–198 (1992).PubMedGoogle Scholar
  28. 28.
    Gottesman S, Squires C, Pichersky E, Carrington M, Hobbs M, Mattick JS, Dalrymple B, Kuramitsu H, Shiroza T, Foster T: Conservation of the regulatory subunit for the Clp APT-dependent protease in prokaryotes and eukaryotes. Proc Natl Acad Sci USA 87: 3513–3517 (1990).PubMedGoogle Scholar
  29. 29.
    Greenblatt IM: A chromosome replication pattern deduced from pericarp phenotypes resulting from movements of the transposable element, Modulator, in maize. Genetics 108: 471–485 (1984).Google Scholar
  30. 30.
    Grotewold E, Athma P, Peterson T: A possible hot spot for Ac insertion in the maize P gene. Mol Gen Genet 230: 329–331 (1991).CrossRefPubMedGoogle Scholar
  31. 31.
    Haring MA, Rommens CMT, Nijkamp HJJ, Hille J: The use of transgenic plants to understand transposition mechanisms and to develop transposon tagging strategies. Plant Mol Biol 16: 449–461 (1991).PubMedGoogle Scholar
  32. 32.
    Hehl R, Baker B: Properties of the maize transposable element Activator in transgenic tobacco plants: a versatile inter-species genetic tool. Plant Cell 2: 709–721 (1990).CrossRefPubMedGoogle Scholar
  33. 33.
    Hille J, Koornneef M, Ramanna MS, Zabel P: Tomato: a crop species amenable to improvement by cellular and molecular methods. Euphytica 42: 1–23 (1989).Google Scholar
  34. 34.
    Jones JDG, Carland FM, Maliga P, Dooner HK: Visual detection of transposition of the maize element Activator (Ac) in tobacco seedlings. Science 244: 204–207 (1989).Google Scholar
  35. 35.
    Kunze R, Stochaj U, Laufs J, Starlinger P: Transcription of transposable element Activator (Ac) of Zea mays L. EMBO J 6: 1555–1563 (1987).Google Scholar
  36. 36.
    Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L: MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174–181 (1987).PubMedGoogle Scholar
  37. 37.
    Lassner M, Palys JM, Yoder JI: Genetic transactivation of Dissociation elements in transgenic tomato plants. Mol Gen Genet 218: 25–32 (1989).CrossRefGoogle Scholar
  38. 38.
    McClintock B: Chromosome organization and genic expression. Cold Spring Harbor Symp Quant Biol 16: 13–47 (1951).PubMedGoogle Scholar
  39. 39.
    Messeguer R, Ganal MW, Steffens JC, Tanksley SD: Characterization of the level, target sites and inheritance of cytosine methylation in tomato nuclear DNA. Plant Mol Biol 16: 753–770 (1991).PubMedGoogle Scholar
  40. 40.
    Moreno MA, Chen J, Greenblatt I, Dellaporta SL: Reconstitutional mutagenesis of the maize P gene by short-range Ac transpositions. Genetics 131: 939–956 (1992).PubMedGoogle Scholar
  41. 41.
    O'Hare K, Rubin GM: Structures of P transposable elements and their sites of insertion and excision in the Drosophila melanogaster genome. Cell 34: 25–35 (1983).CrossRefPubMedGoogle Scholar
  42. 42.
    Osborne BI, Corr CA, Prince JP, Hehl R, Tanksley SD, McCormick S, Baker B: Ac transposition from a T-DNA can generate linked and unlinked clusters of insertions in the tomato genome. Genetics 129: 833–844 (1991).PubMedGoogle Scholar
  43. 43.
    Oshima M, Harada N, Matsuoka M, Ohashi Y: The nucleotide sequence of pathogenesis-related (PR) 1b protein gene of tobacco. Nucl Acids Res 18: 182 (1990).PubMedGoogle Scholar
  44. 44.
    Pohlman RF, Fedoroff NV, Messing J: The nucleotide sequence of the maize controlling element Activator. Cell 37: 635–643 (1984).CrossRefPubMedGoogle Scholar
  45. 45.
    Robbins TP, Carpenter R, Coen ES: A chromosome rearrangement suggests that donor and recipient sites are associated during Tam3 transposition in Antirrhinum majus. EMBO J 8: 5–13 (1989).Google Scholar
  46. 46.
    Rommens CMT, van Haaren MJJ, Buchel AS, Mol JNM, van Tunen AJ, Nijkamp HJJ, Hille J: Transactivation of Ds by Ac-transposase gene fusions in tobacco. Mol Gen Genet 231: 433–441 (1992).CrossRefPubMedGoogle Scholar
  47. 47.
    Rommens CMT, Rudenko GN, Dijkwel PPD, van Haaren MJJ, Ouwerkerk PBF, Blok KM, Nijkamp HJJ, Hille J: Characterization of the Ac/Ds behaviour in transgenic tomato plants using plasmid rescue. Plant Mol Biol 20: 61–70 (1992).PubMedGoogle Scholar
  48. 48.
    Yoder JI, Palys J, Alpert K, Lassner M: Ac transposition in transgenic tomato plants. Mol Gen Genet 213: 291–296 (1988).Google Scholar
  49. 49.
    Yoder JI: Rapid proliferation of the maize transposable element Activator in transgenic tomato. Plant Cell 2: 723–730 (1990).CrossRefPubMedGoogle Scholar

Copyright information

© Kluwer Academic Publishers 1993

Authors and Affiliations

  • Caius M. T. Rommens
    • 1
  • Tichafa R. I. Munyikwa
    • 1
  • Bert Overduin
    • 1
  • H. John J. Nijkamp
    • 1
  • Jacques Hille
    • 1
  1. 1.Department of GeneticsFree UniversityAmsterdamNetherlands

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