Abstract
Integrative colloidosomes with hierarchical structure and advanced function may serve as biomimetic microreactors to carry out catalytic reactions by compartmentalizing biological species within semipermeable membranes. Despite of recent progress in colloidosome design, integration of biological and inorganic components into tiered structures to tackle the remaining challenges of biocatalysis is highly demanded. Here, we report a rational design of three-tiered colloidosomes via the Pickering emulsion process. The microreactor consists of crosslinked amphiphilic silica-polymer hybrid nanoparticles as the semipermeable shell, an enzyme-incorporated catalytic sub-layer, and a partially-silicified adsorptive lumen. By leveraging confinement and enrichment effect, we demonstrate the acceleration of lipase-catalyzed ester hydrolysis within the microcompartment of organic-inorganic hybrid colloidosomes. The catalytic colloidosomes are further assembled into a closely packed column for enzymatic reactions in a continuous flow format with enhanced reaction rates. The three-tiered colloidosomes provide a reliable platform to integrate functional building blocks into a biomimetic compartmentalized microreactor with spatially controlled organization and high-performance functions.
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Introduction
Confinement of biomolecules and biochemical reactions within membrane-bound microcompartments is a key step towards the construction of biomimetic microreactors that are capable of mimicking the rudimentary functionality of living cells1,2. Towards the localization of enzymatic elements, synthetic strategies primarily take advantage of spontaneous or directed amphiphile assembly in solution or at interface to produce microcompartments such as fatty acid vesicles3 and liposomes4,5, polymersomes6,7,8, layer-by-layer capsules9, and proteinosomes10,11. Such bottom-up approaches offer plausible scenarios for the origin of life and have been utilized to demonstrate a diverse range of cell-mimicking functions including enzyme-mediated catalysis12,13, deoxyribonucleic acid (DNA) amplification14, and gene expression15. Recently, cell-sized colloidosomal microcompartments have been developed from self-assembly of colloid particles (e.g., SiO2 spherical particles16, Janus microgels17,18, metal-containing hybrid particles19,20, metal–organic frameworks21, or magnetic particles22) at the oil/water interface via Pickering emulsion23,24,25,26. These semi-permeable and robust structures comprise ordered aggregates of colloids and have been used to partially mimic the biological membranes27,28,29,30.
In-housing integrated biological or biomimetic functions with colloidosomal microreactors have been achieved for applications such as gene expression31, enzyme reactions32,33, artificial cytoskeletal assembly34, cell growth and division35, and cell communication36,37,38. A central step towards these cell-like entities is the capability of spatially organizing building blocks within confined space and eventually optimizing the performance of the artificial systems39. This usually requires well-defined organization of active elements in microcompartments via multiple noncovalent forces40. Besides, efficient mass transporting also plays a key role in increasing the efficiency of functional processes within colloidosomes, especially for those involving multiphase reactions41,42.
In this work, we aim to integrate distinct building blocks of colloidosomes into cell-like microcompartments with microstructural hierarchy and explore their potential application as microreactors. To this end, we prepared organic–inorganic hybrid capsules comprising closely packed SiO2-polymer patchy nanoparticles (SiPNPs) synthesized from a water-in-isooctanol Pickering emulsion (Fig. 1), in which a catalytic enzyme sub-layer was incorporated. The hybrid silica-polymer membrane of colloidosomes was further reinforced by surface crosslinking with tetramethoxysilane (TMOS), which caused the partial silicification of the aqueous interior. All together, we demonstrated the rational design of hierarchical colloidosomes consisting of a hybrid semi-permeable membrane, an enzyme sub-layer, and an aqueous interior filled with adsorptive silica nanoparticles. We further used colloidosomes as biomimetic microreactors and conducted enzyme-catalytic reactions within the membrane-gated microcompartments in bath reaction system and a continuous flow system.
Results
Construction of hierarchical three-tiered colloidosomes
Following the steps shown schematically in Fig. 1, we successfully constructed a colloidosomal microreactor consisting of crosslinked SiPNPs as the semi-permeable shell layer, an inner attached enzyme sub-layer as the catalytic site, and silica nanoparticle-filled adsorptive lumen (Fig. 2a). The patchy SiPNPs were synthesized by one-step emulsion polymerization of 3-(trimethoxysilyl) propyl methacrylate (TPM) in the presence of hydrophilic SiO2 nanoparticles (~25 nm)43. The discrete hybrid nanoparticles exhibited a raspberry-like morphology and a hydrodynamic diameter of ~125 nm (Fig. 2b and Supplementary Fig. 1a–c). The combination of hydrophilic silica and hydrophobic polymer into SiPNPs gave rise to a colloidal amphiphilicity that offered excellent particle dispersity in both organic solvents (e.g., toluene and isooctanol) and water (Supplementary Fig. 2a). This property further enabled the preparation of toluene-in-water (oil/water) and water-in-isooctanol (water/oil) Pickering emulsions by using SiPNPs as the stabilizing agents (Supplementary Fig. 2b).
To incorporate enzyme into colloidosomes, we incubated an aqueous solution of lipase (1.5 mg mL−1 in Tris-HCl buffer) with an isooctanol suspension of amphiphilic SiPNPs (1 mg mL−1) to form a water-in-oil Pickering emulsion (~45 μm, Fig. 2c and Supplementary Fig. 3). We observed that the lipase did not lose catalytic activity after complexing with SiPNPs (Supplementary Fig. 4). These enzyme-incorporated microcompartments remained structurally stable for several weeks, whereas emulsion stabilized by lipase alone demulsified within 20 min, indicating the crucial role of the amphiphilic SiPNPs in colloidosome stability (Supplementary Figs. 5–7).
The lipase-loaded colloidosomes were further crosslinked with the addition of TMOS, which generated interconnected silica network between seed nanoparticles at the interface and thereby enhanced the robustness of the membrane (Fig. 2d). Scanning electron microscopy (SEM) image showed a wrinkled continuous silica-polymer shell on air-dried colloidosomes (Fig. 2e), which became smooth and spherical shape at a higher concentration of TMOS (Supplementary Fig. 8). The crosslinked colloidosomes maintained a structural integrality after phase transfer and drying/rehydration cycles without noticeable morphological distortion (Supplementary Figs. 9 and 10).
The spatial distribution of lipase and silica-polymer layers was evident from confocal laser scanning microscopy (CLSM) measurement, in which patchy SiPNP nanoparticles and lipase were specifically labeled with fluorescein isothiocyanate (FITC) and rhodamine isothiocyanate (RhITC), respectively. The FITC/RhITC labeling allowed us to identify the composition of colloidosome membrane by distinguishing the outer FITC-SiPNPs layer (green fluorescence) and inner RhITC-lipase layer (red fluorescence) from the CLSM images (Fig. 2f, g) and the three-dimensional (3D)-reconstructed CLSM images (Fig. 2h and Supplementary Fig. 11)44. It was clearly seen from SEM results (Supplementary Fig. 12) that lipase was adsorbed on the inner surface of SiPNP layer, likely due to the hydrophobic effect and charge interaction between lipase and SiPNPs at the oil/water interface45,46,47. The lipase-contained hierarchical structure was demonstrated to be stable, without noticeable leakage of enzyme from colloidosomes (Supplementary Fig. 13). Similar tiered structures were obtained by using amphiphilic enzymes (e.g., urease, glucose oxidase, and horseradish peroxidase). In contrast, trypsin with increased hydrophilicity did not specifically remain at the interface of colloidosomes (Supplementary Fig. 14). In addition, SEM (Fig. 2i) and fluorescence microscopy images (Supplementary Fig. 15) showed the formation of SiO2 nanoparticles in the aqueous lumen, which was likely due to the hydrolysis of TMOS inside the colloidosomes. All together, we have demonstrated a general approach to construct three-tiered colloidosomes via the Pickering emulsion process.
We further investigated the performance of colloidosomes for encapsulating a range of biomolecules (Supplementary Fig. 16). Anionic compounds (i.e., calcein and carboxyfluorescein-labeled single-stranded DNA (FAM-ssDNA) and non-ionic molecules (i.e., FITC-dextran) were encapsulated and homogenously distributed within the non-crosslinked colloidosomes, whereas cationic molecules such as rhodamine 6G (Rh6G) and RhITC-poly(diallyldimethylammonium chloride) (RhITC-PDDA) preferred to adsorb at the interface. Upon crosslinking with TMOS, the surface-absorbing compounds were observed to redistribute in the interior of the colloidosomes regardless of the environmental solvents (isooctanol and water).
We also investigated the uptake capability of colloidosomes in isooctanol before and after crosslinking. Hydrophobic compounds such as 1-pyrenemethylamine hydrochloride (PyNH2) and fluorescent phospholipid nitro benzoxadiazol-phosphoethanolamine (NBD-PE) cannot be segregated by the non-crosslinked colloidosomes (Supplementary Fig. 17a, b). After crosslinking the shell with TMOS, however, the resultant shell-crosslinked colloidosomes enriched PyNH2 and NBD-PE onto the shell (Supplementary Fig. 17c, d). In contrast, the majority of hydrophobic PyNH2 and NBD-PE was observed to be sequestered within the aqueous lumen of three-tiered colloidosomes (Fig. 2j, k and Supplementary Fig. 17e, f and Movie 1)48,49, indicating that the formation of silica nanoparticles via TMOS hydrolysis was accounted for the molecule uptake of the aqueous lumen.
We further explored the uptake behavior in mixed solutions (e.g., Nile red, NBD-PE, and PyNH2 in isooctanol; bovine serum albumin (BSA), dextran, and Hoechst in water) by colloidosomes. It is observed that small hydrophobic (e.g., Nile red, NBD-PE, and PyNH2) and hydrophilic (e.g., Hoechst) compounds were efficiently sequestered by the lumen of colloidosome (Supplementary Fig. 18 and Movie 2), macromolecules such as PDDA (200 kDa) and DNA (31 kDa) showed relatively slower penetration through the shell (Supplementary Fig. 19 and Movie 3), whereas amphiphilic molecules (e.g., BSA) and rigid biopolymers (e.g., dextran) were mainly stuck at the shell possibly due to protein–SiPNPs hydrophobic interactions and backbone rigidness-limited diffusion, respectively (Supplementary Figs. 20 and 21, and Movie 4). Taken together, we believe that the hierarchical colloidosome can act as a semi-permeable compartment to selectively sequester biomolecules, which is primarily due to the semi-permeable crosslinked silica-polymer gated membrane and the adsorptive nanoparticle-filled inner cavity.
Enhanced catalytic reaction within three-tiered colloidosomes
Given that the colloidosomes were able to uptake external molecules efficiently in both oil and water phases, we proposed that the three-tiered colloidosomes may act as microreactors that are able to enrich enzyme substrates for accelerated catalytic reactions. To prove our hypothesis, we examined the hydrolysis of p-nitrophenyl palmitate (p-NPP) in lipase-loaded colloidosomes before and after crosslinking (Fig. 3a), in which oil-soluble p-NPP was hydrolyzed into a yellow product p-nitrophenol with a characteristic absorption peak at 410 nm. Figure 3b showed a rapid increase of p-nitrophenol absorption intensity at the initial stage (t < 24 min) in the lipase-loaded crosslinked colloidosomes, and a relatively slow increase thereafter. Compared to crosslinked colloidosomes, the hydrolysis reaction with lipase-loaded non-crosslinked colloidosomes was slower at the initial stage. The reaction catalyzed by free lipase was found to be even slower, highlighting the importance of colloidosomal microreactor in boosting confined reactions. The underline reason may be the greatly enlarged reaction interfacial area of colloidosomal microreactor50. The occurrence of lipase-catalyzed p-NPP hydrolysis within the confined colloidosomal microreactor was also confirmed by optical microscopy, where colorless microcompartments turned into yellow after reaction (Fig. 3c, d). The high catalytic reaction rate in crosslinked colloidosomes was likely due to the enrichment of the substrate p-NPP by silica nanoparticles in the adsorptive lumen. The importance of adsorptive silica was highlighted in Supplementary Fig. 22, where the initial reaction rate was found to increase with the amount of TMOS (precursor of silica). After the initial stage, the reaction slowed down due to the accumulation of products (nitrophenol and palmitic acid) within colloidosomes.
Ester hydrolysis in a column reactor packed with three-tiered colloidosomes
In order to avoid slow reaction after the initial stage, we proposed a continuous flow system that allow for removing the hydrolysis products and thereby maintaining long-term catalytic activity of colloidosomes. As shown in Fig. 4a, the column was packed with the three-tiered colloidosomal microreactors (~45 μm), which can offer sufficient void channels for the oil flow to pass through and reduce the pressure drop in the column. With the continuous influx of hydrophobic glyceryl tributyrate (GTB) through the lipase-containing colloidosomal microreactors, the reaction products (glycerol and butyric acid) can be efficiently removed by the efflux, resulting in a rapid hydrolysis rate under the non-equilibrium reaction condition. The 3D-reconstructed CLSM image in Fig. 4b revealed the hierarchical structure of colloidosomes, in which the red fluorescence represented the catalytic layer of RhITC-lipase and the green fluorescence was the adsorptive silica-dispersing lumen.
We further evaluated the reaction efficiency in the colloidosome-based flow reaction, and colloidosome- and lipase-based bath reactions. As shown in Fig. 4c, d, the reaction rate of GTB hydrolysis in colloidosome-embedded flow systems was observed to be higher than those in the bath systems of lipase-loaded colloidosomes and lipase. GTB conversion in the continuous flow reactor packed with lipase-loaded three-tiered colloidosomes reached a steady conversion of ~95% with the specific activity (SA) of 9.54 U mg−1, higher than that of colloidosome-based reaction (~52%, 1.67 U mg−1) and lipase-based bath reaction (~19%, 0.92 U mg−1), collaborated by the comparison of initial SA for flow and batch systems (Supplementary Fig. 24). We proposed that the coupling of colloidosomes with a continuous flow system greatly eliminated the product inhibition of the enzymatic reaction, which led to a long-term high-efficient catalysis mode.
We further analyzed the lipase SA and reaction kinetic parameters in the three-tiered colloidosome-based flow reactions. As shown in Fig. 4e, the SA values of lipase in the flow system surged upon increasing the GTB concentration, while this effect was less significant in the bath reaction system. This is possibly due to the fast product removal in colloidosome-based flow system. These results indicated that the flow reaction system possessed better tolerance at high substrate concentrations (Supplementary Fig. 25). In addition, we determined the kinetic parameters of lipase-mediated reactions in the flow and bath systems by changing the concentrations of substrates (Supplementary Fig. 26). Figure 4f presented the apparent Michaelis–Menten constant km, the maximal reaction rate vmax (rate of the reaction when the active sites of the enzyme are saturated with substrate), the turnover number kcat, and the ratio of kcat and km (kcat/km, representing the general enzymatic efficiency)51. The km value for the flow system was determined to be 0.65 ± 0.05 M, close to that for batch systems, suggesting a similar affinity between the enzyme and reactant due to the homologous reaction environment for these reaction systems50. Vmax of the flow system was estimated to be 0.26 M min−1, nearly double as high as that of the bath systems. Moreover, kcat and kcat/km of the flow system were 1.85 times and twice as high as those corresponding to the bath reactions, respectively, which all together demonstrated the increased reaction efficiency of the colloidosome-based flow reaction. The reaction enhancement could be attributed to both the three-tiered microarchitecture of colloidosomes capable of enriching substrates within confined space and the continuous flow system that enabled the removal of reaction products. On the basis of this hypothesis, the SA values in the flow system can be further improved by increasing the flow rate of the mobile phase (Fig. 4g).
Discussion
In conclusion, we constructed three-tiered catalytic colloidosomes comprising of a semi-permeable membrane with hybrid silica-polymer layer, an enzyme sub-layer, and an internal aqueous lumen capable of enriching biomolecules. The microcompartments showed selective sequestration of molecules ranging from organic dyes, proteins, polysaccharide, and DNA, which empower the acceleration of enzymatic reactions. By packing the three-tiered colloidosomes into a flow column, we were able to alleviate the inhibition effect arising from the accumulation of products by using a continuous flow reaction format. Our results demonstrate a sophisticated approach to integrate multiple building blocks into a hierarchical compartment with optimized functionalities, which could potentially find applications in broad fields such as microreactors, biomimetics, synthetic biology, and nanomedicine. The combination of hierarchical structures along with the non-equilibrium reaction represents a viable approach towards cell-like microcompartments and catalytic microreactors.
Methods
Synthesis of amphiphilic raspberry-like SiO2-TPM composite nanoparticles (SiPNPs)
Typically, 0.56 mL of ludox silica TM40 suspension was shaken and added into 40 mL Milli-Q water in a 100 mL three-necked flask, followed by adding 0.5 mL of TPM. The mixture was stirred for 24 h to form an emulsion, then deoxygenated by bubbling nitrogen for 30 min and heated to 70 °C. Polymerization was initiated by adding 10 mg of potassium peroxydisulfate and the mixture was incubated at 70 °C for another 24 h. The resultant suspension was centrifuged at 4800 × g for 5 min and the supernatant was discarded. The products were washed with ethanol for three times and dried in vacuum for further use.
Preparation of the three-tiered colloidosomal microreactors
Typically, 1.0 mg of the as-prepared SiPNPs was added into 1.0 mL of isooctanol in a 2 mL centrifuge tube. The mixture was dispersed by homogenization with an UltraTurrax T10 homogenizer for 5 min at 6000 r.p.m. To this mixture, 70 μL of lipase aqueous solution (1.5 mg mL−1 in Tris-HCl buffer, the concentration of lipase to load the colloidosomes) was added and the suspension was homogenized for 1 min at 3000 r.p.m. to yield a Pickering emulsion. The water/oil volume ratio of the system was 0.07 and the concentration of SiPNPs in oil was set to 1 mg mL−1, respectively. Afterwards, 20 μL of TMOS was added to 1.07 mL of the preformed Pickering emulsion to crosslink the SiPNPs at oil–water interface. The mixture was gently shaken for 3 min and left unstirred overnight at room temperature.
Molecule encapsulation within colloidosomal microreactors
Colloidosomes with encapsulated molecules were prepared following the colloidosome preparation procedures, except that both lipase and fluorescent molecules were included in the aqueous solution. Typically, 10 μL of Rh6G (0.2 mM), RhITC-PDDA (0.5 mg mL−1), calcein (0.2 mM), FAM-ssDNA (100 μM, Supplementary Table 1), FITC-dextran (0.5 mg mL−1), or RhITC-BSA (0.5 mg mL−1) was added to 60 μL of lipase solution. This solution was mixed with isooctanol containing amphiphilic raspberry-like SiPNPs (1 mg mL−1, 1 mL) and homogenized with 3000 r.p.m. for 1 min.
Molecular uptake of the three-tiered colloidosomal microreactors
For uptake tests in oil phase, the solution of PyNH2 (1 mg mL−1, in dimethyl sulfoxide) or NBD-PE (1 mM, in methanol) was added into the dispersion of colloidosomes in isooctanol at a volume ratio of 0.02, respectively. The uptake experiments were monitored by CLSM after 5 min of mixing.
For uptake tests in water phase, the aqueous solution of Rh6G (0.2 mM), Hoechst (20 μM), RhITC-PDDA (0.5 mg mL−1), calcein (0.02 mM), FAM-ssDNA (100 μM), FITC-dextran (0.5 mg mL−1), or RhITC-BSA (0.05 mg mL−1) was added into the aqueous colloidosome dispersions at a volume ratio of 0.02, respectively. The uptake experiments were monitored by CLSM.
For uptake tests of mixture in oil and water phase, all dye solutions were premixed for further use. Typically, 10 μL of Nile red (0.5 mg mL−1, in methanol), NBD-PE (1 mM, in methanol), and PyNH2 (1 mg mL−1, in dimethyl sulfoxide) were premixed and 1 μL of the mixture was added into 50 μL of colloidosome oil dispersion. Likewise, 10 μL of RhITC-BSA (0.05 mg mL−1), FITC-dextran (0.5 mg mL−1), and Hoechst (20 μM) were premixed and 1 μL of the mixture was added into 50 μL of colloidosome aqueous dispersion.
Lipase-catalyzed p-NPP hydrolysis within colloidosomes in bath reaction system
For colloidosomes, 50 μL of as-prepared colloidosomes in isooctanol with encapsulated lipase (1.5 mg mL−1 in 50 mM Tris-HCl buffer pH 8.0) was mixed with 50 μL p-NPP (15 mg mL−1 in isooctanol) in a 96-well microplate (Costar) with a transparent flat bottom. For free enzyme, 3.21 μL of lipase solution (1.5 mg mL−1) was mixed with 46.79 μL isooctanol and 50 μL p-NPP (15 mg mL−1). The absorbance of reaction mixture at 410 nm was recorded for every time (300 s) on a plate reader (CLARIO star plus, BMG Labtech), which is equipped with a temperature controller to maintain the reaction system at 40 °C.
Lipase-catalyzed GTB hydrolysis by colloidosomes in bath reaction system
Typically, 2 mg of SiPNPs was added into 2 mL of isooctanol and homogenized for 5 min at 6000 r.p.m. Next, 140 μL of lipase solution (1.5 mg mL−1 in 50 mM Tris-HCl buffer pH 8.0) was then added followed by homogenization (3000 r.p.m., 1 min) and crosslinking (40 μL, >6 h) processes. The colloidosomes settled down from the dispersion and were consequently transferred to 1 mL of GTB in isooctanol (e.g., 0.5 M) to conduct the enzyme-catalytic reaction with rotating mixer (Kylin-Bell Lab Instruments, BE-1100, China). The temperature of the reaction system was maintained at 40 °C using a constant temperature incubator (Bluepard LRH-150, China). Aliquots of the solution were taken at intervals for monitoring conversions by gas chromatography-mass spectrometry (GC-MS, SHIMADZU QP2010, Japan) analysis (Supplementary Figs. 27–29).
Lipase-catalyzed GTB hydrolysis by colloidosomes in continuous flow reaction system
Typically, a suspension of the lipase-encapsulating colloidosomes (e.g., 10 mL) in isooctanol was added into a column reactor (0.8 cm of inner diameter) containing a filter disc (~15 μm in pore diameter). A solution of GTB (e.g., 0.5 M) in isooctanol was pumped as mobile phase through the inner tube of the column reactor at a given flow rate (e.g., 1 mL h−1). The column temperature was kept at 40 °C by the peripheral casing containing water with constant temperature. The outflow was collected at intervals (e.g., 5 h at steady state) for GC-MS analysis.
The SA of lipase was determined as the amount of substrate converted per min by enzyme (i.e., μmol min−1 mg−1). SA values were calculated at the steady state in continuous flow reaction, within the first 30 min and over 20 h in bath reactions for further analysis.
Data availability
All data needed to evaluate the conclusions in the paper are present in the paper and/or the Supplementary Materials.
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Acknowledgements
We thank the National Natural Science Foundation of China (Number 22072159) for financial support. We thank W. Mu for fruitful discussions and Y. Ji for assistance with confocal microscopy.
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Contributions
H.W., D.Q. and Y.Q. conceived the concept and experiments. Y.Q. directed the research. H.W., X.M. and X.D. performed the experiments and analyzed the data. H.W. and Y.Q. wrote the paper.
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Wu, H., Du, X., Meng, X. et al. A three-tiered colloidosomal microreactor for continuous flow catalysis. Nat Commun 12, 6113 (2021). https://doi.org/10.1038/s41467-021-26381-x
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DOI: https://doi.org/10.1038/s41467-021-26381-x
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