Skip to main content

Advertisement

Log in

3D spheroid model of mIMCD3 cells for studying ciliopathies and renal epithelial disorders

  • Protocol
  • Published:

From Nature Protocols

View current issue Submit your manuscript

Abstract

We have developed a novel 3D cell culture model that uses mouse inner-medullary collecting duct (mIMCD3) cells to generate epithelial spheroids. This model is amenable to efficient siRNA knockdown and subsequent rescue with human patient-derived alleles. Spheroids develop apicobasal polarity and complete lumens, and they are consequently an ideal model for polarity defects seen in renal ciliopathies such as nephronophthisis. Briefly, mIMCD3 cells are transfected and subsequently passaged to a Matrigel mixture, which is seeded in chamber slides and covered in growth medium. Once the spheroids are formed, Matrigel is dissolved and immunocytochemistry is performed in the chamber slides. The technique is amenable to semiautomatic imaging analysis, and it can test multiple genes simultaneously, gene-dosing effects and a variety of therapeutic interventions. The spheroid technique is a unique and simple 6-d in vitro method of interrogating ex vivo tissue organization.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1: Confocal microscopy sections.
Figure 2: Confocal microscopy section of the equatorial plane of a living unfixed mIMCD3 spheroid expressing GFP-labeled serotonin receptor 5-hydroxytryptamine.
Figure 3: Light-microscope pictures of mIMCD3 cells in culture.

Similar content being viewed by others

References

  1. Tobin, J.L. & Beales, P.L. The nonmotile ciliopathies. Genet. Med. 11, 386–402 (2009).

    Article  CAS  Google Scholar 

  2. Hildebrandt, F., Benzing, T. & Katsanis, N. Ciliopathies. N. Engl. J. Med. 364, 1533–1543 (2011).

    Article  CAS  Google Scholar 

  3. Renkema, K.Y., Stokman, M.F., Giles, R.H. & Knoers, N.V. Next-generation sequencing for research and diagnostics in kidney disease. Nat. Rev. Nephrol. 10, 433–444 (2014).

    Article  CAS  Google Scholar 

  4. Stokman, G., Qin, Y., Racz, Z., Hamar, P. & Price, L.S. Application of siRNA in targeting protein expression in kidney disease. Adv. Drug Deliv. Rev. 62, 1378–1389 (2010).

    Article  CAS  Google Scholar 

  5. Pampaloni, F., Reynaud, E.G. & Stelzer, E.H. The third dimension bridges the gap between cell culture and live tissue. Nat. Rev. Mol. Cell Biol. 8, 839–845 (2007).

    Article  CAS  Google Scholar 

  6. O'Brien, L.E., Zegers, M.M. & Mostov, K.E. Opinion: building epithelial architecture: insights from three-dimensional culture models. Nat. Rev. Mol. Cell Biol. 3, 531–537 (2002).

    Article  CAS  Google Scholar 

  7. Otto, E.A. et al. Candidate exome capture identifies mutation of SDCCAG8 as the cause of a retinal-renal ciliopathy. Nat. Genet. 42, 840–850 (2010).

    Article  CAS  Google Scholar 

  8. Rauchman, M.I., Nigam, S.K., Delpire, E. & Gullans, S.R. An osmotically tolerant inner medullary collecting duct cell line from an SV40 transgenic mouse. Am. J. Physiol. 265, F416–F424 (1993).

    CAS  PubMed  Google Scholar 

  9. Luijten, M.N. et al. Birt-Hogg-Dube syndrome is a novel ciliopathy. Hum. Mol. Genet. 22, 4383–4397 (2013).

    Article  CAS  Google Scholar 

  10. Chaki, M. et al. Exome capture reveals ZNF423 and CEP164 mutations, linking renal ciliopathies to DNA damage response signaling. Cell 150, 533–548 (2012).

    Article  CAS  Google Scholar 

  11. Choi, H.J. et al. NEK8 links the ATR-regulated replication stress response and S phase CDK activity to renal ciliopathies. Mol. Cell. 51, 423–439 (2013).

    Article  CAS  Google Scholar 

  12. de Groot, T. et al. Lithium causes G2 arrest of renal principal cells. J. Am. Soc. Nephrol. 25, 501–510 (2014).

    Article  CAS  Google Scholar 

  13. Ghosh, A.K., Hurd, T. & Hildebrandt, F. 3D spheroid defects in NPHP knockdown cells are rescued by the somatostatin receptor agonist octreotide. Am. J. Physiol. Renal. Physiol. 303, F1225–F1229 (2012).

    Article  CAS  Google Scholar 

  14. Sang, L. et al. Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways. Cell 145, 513–528 (2011).

    Article  CAS  Google Scholar 

  15. Hynes, A.M. et al. Murine Joubert syndrome reveals Hedgehog signaling defects as a potential therapeutic target for nephronophthisis. Proc. Natl. Acad. Sci. USA 111, 9893–9898 (2014).

    Article  CAS  Google Scholar 

  16. Chow, W.H. & Devesa, S.S. Contemporary epidemiology of renal cell cancer. Cancer J. 14, 288–301 (2008).

    Article  CAS  Google Scholar 

  17. Lilleby, W. & Fossa, S.D. Chemotherapy in metastatic renal cell cancer. World J. Urol. 23, 175–179 (2005).

    Article  CAS  Google Scholar 

  18. Elia, N. & Lippincott-Schwartz, J. Culturing MDCK cells in three dimensions for analyzing intracellular dynamics. Curr. Protoc. Cell Biol. 43, 4.22.1–4.22.18 (2009).

    Google Scholar 

  19. Debnath, J. & Brugge, J.S. Modelling glandular epithelial cancers in three-dimensional cultures. Nat. Rev. Cancer. 5, 675–688 (2005).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank C.J. Westlake and L. Sang for their help in setting up the protocol, and M.A. Jewett for expert urological support. R.H.G. is supported by the Dutch Kidney Foundation grants CP11.18 (KOUNCIL) and 13A3D103, and EU FP7/2009 241955 (SYSCILIA) and 305608 (EURenOmics). H.A. is supported by the Anna-Liise Farquharson Kidney Cancer Research Fund, Princess Margaret Foundation, Toronto, Canada.

Author information

Authors and Affiliations

Authors

Contributions

R.H.G. and P.K.J. designed the protocol, which was independently validated by H.A. R.H.G. and H.A. drafted the manuscript.

Corresponding author

Correspondence to Rachel H Giles.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Real-time movie of mIMCD3 cells in a spheroid transfected with somatostatin receptor 5-HTTP:GFP.

Cilia and basolateral membranes are green fluorescent. (MOV 2867 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Giles, R., Ajzenberg, H. & Jackson, P. 3D spheroid model of mIMCD3 cells for studying ciliopathies and renal epithelial disorders. Nat Protoc 9, 2725–2731 (2014). https://doi.org/10.1038/nprot.2014.181

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nprot.2014.181

  • Springer Nature Limited

This article is cited by

Navigation