Skip to main content
Log in

Expression of PAL and PR2 pathogenesis related genes in barley plants challenged with closely related Pyrenophora species

  • Original Paper
  • Published:
Cereal Research Communications Aims and scope Submit manuscript

Abstract

Net blotch and leaf stripe caused by Pyrenophora teres and Pyrenophora graminea, respectively, are economical diseases of barley worldwide. Relatively little is known about the defense responses of barley challenged with these two closely related species. In the current work, expression of two well known defense-related genes PAL and PR2 were monitored in resistant and susceptible barley cultivars at early points of infection using quantitative real-time PCR (qPCR). Data showed significant variance in the expression patterns of the both genes between barley P. teres or P. graminea interactions as compared to the non-inoculated controls. It is also noteworthy that PAL and PR2 genes have a higher constitutive expression and faster induction in the resistant cultivar as compared with the susceptible one after infection with each pathogen. However, PCR (qPCR) analysis revealed higher gene expression in resistant barley plants inoculated with P. graminea as compared with P. teres, with a maximum expression for PR2 (13.8 and 6.41-fold) and PAL (14.8 and 7.89-fold) respectively, at 6 days post inoculation. The obtained results suggest that PAL and PR2 genes, positively regulate P. teres and P. graminea—resistance in barley plants during disease progress, which can provide testable hypotheses that will need direct future tests to determine how these changes may be specified in the genome of these closely related Pyrenophora species.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  • Abu Qamar M, Liu ZH, Faris JD, Chao S, Edwards MC et al (2008) A region of barley chromosome 6H harbors multiple major genes associated with the net type net blotch resistance. Theor Appl Genet 117:1261–1270

    Article  CAS  Google Scholar 

  • Arabi MIE, Al-safadi B, Charbaji T (2003) Pathogenic variation among isolates of Pyrenophora teres the causal agent of barley net blotch. J Phytopathol 151:376–382

    Article  Google Scholar 

  • Arabi MIE, Jawhar M, Al-Safadi B, Mirali N (2004) Yield responses of barley to leaf stripe (Pyrenophora graminea) under experimental conditions in Southern Syria. J Phytopathol 152:519–523

    Article  Google Scholar 

  • Bates J, Taylor E, Kenyon D, Thomas J (2001) The application of real-time PCR to the identification, detection and quantification of Pyrenophora species in barley seed. Mol Plant Pathol 2:49–57

    Article  CAS  Google Scholar 

  • Bishop JG, Dean AM, Mitchell-Olds T (2000) Rapid evolution in plant chitinases: molecular targets of selection in plant-pathogen coevolution. Proc Natl Acad Sci USA 97:5322–5327

    Article  CAS  Google Scholar 

  • Cynthia LC, Peraldi A, Dowd PF, Mottiar Y, Santoro N, Karlen SD, Bukhman YV, Foster CE, Thrower N, Bruno LC, Moskvin OV, Johnson ET, Willhoit ME, Phutane M, Ralph J, Mansfield SD, Nicholson P, Sedbrook JC (2015) Effects of PAL knockdown on cell wall composition, biomass digestibility, and biotic and abiotic stress responses in Brachypodium. J Exp Bot 66:4317–4335

    Article  Google Scholar 

  • Dangl JL, Jones JDG (2001) Plant pathogens and integrated defence responses to infection. Nature 411:826–833

    Article  CAS  Google Scholar 

  • Delogu G, Porta-Puglia A, Vannacci G (1989) Resistance of winter barley varieties subjected to natural inoculum of Pyrenophora graminea. J Genet Breed 43:61–65

    Google Scholar 

  • Derveaux S, Vandesompele J, Hellemans J (2010) How to do successful gene expression analysis using real-time PCR. Methods 50:227–230

    Article  CAS  Google Scholar 

  • Dinglasan E, Hickey L, Ziems L, Fowler R, Anisimova N, Baranova O, Lashina N, Afanasenko O (2019) Genetic characterization of resistance to Pyrenophora teres f. teres in the international barley differential Canadian lake shore. Front Plant Sci. https://doi.org/10.3389/fpls.00326

    Article  PubMed  PubMed Central  Google Scholar 

  • Ebrahim S, Usha K, Singh B (2011) Pathogenesis related (PR) proteins in plant defense mechanism: science against microbial pathogens: communicating current research and technological advances. Sci Against Microb Pathog 2:1043–1054

    Google Scholar 

  • Farahani A, Taghavi S, Afsharifar A, Niazi A (2016) changes in expression of pathogenesis-related gene 1, pathogenesis-related gene 2, phenylalanine ammonia-lyase and catalase in tomato in response to Pectobacterium carotovorum subsp. carotovorum. J Plant Pathol 98:525–530

    Google Scholar 

  • Ghannam A, Alek H, Doumani S, Mansour D, Arabi MIE (2016) Deciphering the transcriptional regulation and spatiotemporal distribution of immunity response in barley to Pyrenophora graminea fungal invasion. BMC Genom 17:256

    Article  Google Scholar 

  • Hammouda AM (1986) Modified technique for inoculation in leaf stripe of barley. Acta Phytopathol Entomol Hung 21:255–259

    Google Scholar 

  • Jebbouj R, Yousfi BE (2009) Barley yield losses due to defoliation of upper three leaves either healthy or infected at boot stage by Pyrenophora teres f. teres. Eur J Plant Pathol 125:303–315

    Article  Google Scholar 

  • Lakkis S, Trotel-Aziz P, Rabenoelina F, Schwarzenberg A, Nguema-Ona E, Clément C, Aziz A (2019) Strengthening grapevine resistance by Pseudomonas fluorescens PTA-CT2 relies on distinct defense pathways in susceptible and partially resistant genotypes to downy mildew and gray mold diseases. Plant Sci Front. https://doi.org/10.3389/fpls.2019.01112

    Article  Google Scholar 

  • Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C (T) method. Methods 25:402–408

    Article  CAS  Google Scholar 

  • Raju S, Jayalakshmi SK, Sreeramulu K (2008) Comparative study on the induction of defense related enzymes in two different cultivars of chickpea (Cicer arietinum L) genotypes by salicylic acid, spermine and Fusarium oxysporum f. sp Ciceri. Aust J Crop Sci 2:121–140

    CAS  Google Scholar 

  • Sánchez-García C, Alvarado-Capó Y, Acosta-Suárez M, Cruz-Martín M, Leiva-Mora M, Roque B (2009) Effect of artificial inoculation of Mycosphaerella fijiensis on the induction of defence-related enzymes in two Musa genotypes. Biotecnol Veg 9:169–176

    Google Scholar 

  • Smedegaard-Peterson V (1983) Cross fertility and genetic relationship between P. teres and P. graminea. The causes of net blotch and leaf stripe of barley. Seed Sci Technol 11:673–680

    Google Scholar 

  • Statkevičiūtė G, Leistrumaitė A (2010) Modern varieties of spring barley as a genetic resource for disease resistance breeding. Agron Res 8:721–728

    Google Scholar 

  • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A et al (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3:1–2

    Article  Google Scholar 

  • Vergara M, Cristani C, Vannacc G (2003) Differential transcript in Pyrenophora graminea and Pyrenophora teres putatively related to pathogenicity. J Plant Pathol 85:157–164

    CAS  Google Scholar 

  • Vogt T (2010) Phenylpropanoid biosynthesis. Mol Plant 3:2–20

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We would like to thank the Director General of AECS and the Head of Molecular biology and Biotechnology Department for their much appreciated help throughout the period of this research. Thanks are also extended to Dr. A. Al-Daoude for critical reading of the manuscript.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. I. E. Arabi.

Additional information

Communicated by A. Mohan.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Arabi, M.I.E., Alek, H., Jawhar, M. et al. Expression of PAL and PR2 pathogenesis related genes in barley plants challenged with closely related Pyrenophora species. CEREAL RESEARCH COMMUNICATIONS 48, 211–216 (2020). https://doi.org/10.1007/s42976-020-00033-0

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s42976-020-00033-0

Keywords

Navigation