Skip to main content
Log in

Rate of decline of Gaeumannomyces graminis var. tritici inoculum and decomposition of residues from wheat cultivars

  • Original Paper
  • Published:
Australasian Plant Pathology Aims and scope Submit manuscript

Abstract

The rate of inoculum decline was determined for Gaeumannomyces graminis var. tritici (Ggt), a fungus causing take-all in cereals which survives saprophytically on crop debris during the intercrop period. Crop residues and Ggt inoculum in soil cores containing residues of six wheat cultivars from two fields were assessed in three experiments at intervals up to 7 months after harvest. At that time, for all cultivars, approximately three quarters of the original residue plant mass remained from crop residues where the stems were on the soil surface. The quantity of Ggt DNA per plant declined on average by 95% after 7 months, with most of the remaining inoculum residing in the stems and crown. Viable inoculum remaining in the plant residues was sufficient to infect newly planted wheat seedlings. It appears that after harvesting wheat exhibiting take-all, a period of more than 7 months is required to ensure inoculum in residues has declined sufficiently in soil to prevent reinfection of Ggt-susceptible cereal crops.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Bailey DJ, Gilligan CA (1999) Dynamics of primary and secondary infection in take-all epidemics. Phytopathology 89:84–91

    Article  CAS  PubMed  Google Scholar 

  • Bauer J, Kirschbaum MUF, Weihermueller L, Huisman JA, Herbst M, Vereecken H (2008) Temperature response of wheat decomposition is more complex than the common approaches of most multi-pool models. Soil Biol Biochem 40:2780–2786

    Article  CAS  Google Scholar 

  • Bithell SL, McLachlan ARG, Hide CCL, McKay A, Cromey MG (2009) Changes in post-harvest levels of Gaeumannomyces graminis var. tritici inoculum in wheat fields. Australas Plant Pathol 38:277–283

    Article  Google Scholar 

  • Bithell SL, McKay A, Butler RC, Herdina O-KK, Hartley D, Cromey MG (2012) Predicting take-all severity in second-year wheat using soil DNA concentrations of Gaeumannomyces graminis var. tritici determined with qPCR. Plant Dis 96:443–451

    Article  CAS  Google Scholar 

  • Chng SF, Cromey MG, Butler RC (2004) Mycoflora of rhizomes and roots of Elytrigia repens, a potential inoculum source for take-all in wheat. New Zealand. Plant Prot 57:59–66

    Google Scholar 

  • Chng SF, Cromey MG, Butler RC (2005) Evaluation of the susceptibility of various grass species to Gaeumannomyces graminis var. tritici. New Zealand. Plant Prot 58:261–267

    Google Scholar 

  • Committee GS (2014) The guide to the GenStat® command language (release 17). VSN International, Hemel Hempsted

    Google Scholar 

  • Cook RJ (2003) Take-all of wheat. Physiol Mol Plant Pathol 62:73–86

    Article  Google Scholar 

  • Cookson WR, Beare MH, Wilson PE (1998) Effects of prior crop residue management on microbial properties and crop residue decomposition. Appl Soil Ecol 7:179–188

    Article  Google Scholar 

  • Curtin D, Francis GS, McCallum FM (2008) Decomposition rate of cereal straw as affected by soil placement. Aust J Soil Res 46:152–160

    Article  Google Scholar 

  • CycSoftware (2009) CycDesigN 4.0 a package for the computer generation of experimental designs. Version 4.0, CycSoftware Ltd, Hamilton

  • Douglas CL Jr, Richman RW (1992) Estimating crop residue decomposition from air temperature, initial nitrogen content, and residue placement. Soil Sci Soc Am J 56:272–278

    Article  Google Scholar 

  • Fraser PM, Williams PH, Haynes RJ (1996) Earthworm species, population size and biomass under different cropping systems across the Canterbury Plains, New Zealand. Appl Soil Ecol 3:49–57

    Article  Google Scholar 

  • Fraser PM, Curtin D, Harrison-Kirk T, Meenken ED, Beare MH, Tabley F, Gillespie RN, Francis GS (2013) Winter nitrate leaching under different tillage and winter cover crop management practices. Soil Sci Soc Am J 77:1391–1401

    Article  CAS  Google Scholar 

  • Harbridge J (2007a) Determination of ammonia (Salicylcate) in 2M KCl soil extracts by flow injection analysis (high throughput), Lachat QuikChem method 12–107–06-2-F. Lachat Instruments, Loveland

    Google Scholar 

  • Harbridge J (2007b) Determination of nitrate in 2M KCl soil extracts by flow injection analysis, Lachat QuikChem method 12–107–04-1-J. Lachat Instruments, Loveland

    Google Scholar 

  • Herdina NS, Jabaji-Hare S, Ophel-Keller K (2004) Persistence of DNA of Gaeumannomyces graminis var. tritici in soil as measured by a DNA-based assay. FEMS Microbiol Ecol 47:143–152

    Article  CAS  PubMed  Google Scholar 

  • Hornby D (1981) Inoculum. In: Asher MJC, Shipton PJ (eds) Biology and control of take-all. Academic Press, London, pp 271–293

    Google Scholar 

  • Hornby D, Bateman GL, Gutteridge RJ, Ward E, Yarham D (1998) Take-all disease of cereals: a regional perspective. CAB International, Wallingford, p 384

    Google Scholar 

  • Hume EA, Horrocks AJ, Fraser PM, Curtin D, Meenken ED, Chng S, Beare MH (2015) Alleviation of take-all in wheat by the earthworm Aporrectodea caliginosa (Savigny). Appl Soil Ecol 90:18–25

    Article  Google Scholar 

  • Kain WM, Young J (1975) I. A soil sampler suitable for sampling pastureland. N Z J Exp Agric 3:177–180

    Google Scholar 

  • Keenan S, Cromey MG, Harrow SA, Bithell SL, Butler RC, Beard SS, Pitman AR (2015) Quantitative PCR to detect Gaeumannomyces graminis var. tritici in symptomatic and non-symptomatic wheat roots. Australas Plant Pathol 44:591–597

    Article  CAS  Google Scholar 

  • Keeney DR, Nelson DW (1982) Nitrogen - inorganic forms. In: Page AL, Miller RH, Keeney DR (eds) Methods of soil analysis, part 2. Chemical and microbiological properties. American Society of Agronomy and Soil Science Society of America, Madison, pp 643–709

    Google Scholar 

  • Lee Y, Nelder JA, Pawitan Y. 2006. Generalized Linear Models with Random Effects: Unified Analysis via H-likelihood: Monographs on Statistics and Applied Probability, v.106. Chapman & Hall/CRC Press, London. p 416

  • McCullagh P, Nelder JA. 1989. Generalized Linear Models. Chapman & Hall, London. 511+xix p

  • National Institute of Water and Atmospheric Research (NIWA) (2016) The National Climate Database. http://cliflo.niwa.co.nz/pls/niwp/wgenf.genform1. Accessed 24 March 2016

  • Ophel-Keller K, McKay A, Hartley D, Herdina CJ (2008) Development of a routine DNA-based testing service for soilborne diseases in Australia. Australas Plant Pathol 37:243–253

    Article  CAS  Google Scholar 

  • Schon N (2016) The great kiwi earthworm. http://agpestconz/wp-content/uploads/2016/02/EARTHWORM-ID-BROCHURE-Jan2016pdf 8 April 2016

  • Sharma BL, Singh SP, Sharma ML (2012) Bio-degradation of crop residues by Trichoderma species vis-a vis nutrient quality of the prepared compost. Sugar Tech 14:174–180

    Article  CAS  Google Scholar 

  • van Toor RF, Bithell SL, Chng SF, McKay A, Cromey MG (2013) Impact of cereal rotation strategies on soil inoculum concentrations and wheat take-all. New Zealand. Plant Prot 66:204–213

    Google Scholar 

  • van Toor RF, Butler RC, Braithwaite M, Bienkowski D, Qiu W, Chng SF, Cromey MG (2016a) Pathogenicity of Gaeumannomyces graminis var. tritici increased by nitrogen applied to soil to enhance the decomposition rate of wheat residues. New Zealand. Plant Prot 69:111–119

    Google Scholar 

  • van Toor RF, Chng S, Warren RM, Butler RC, Cromey MG, Craigie RA, McCloy BL (2016b) Wheat cultivar susceptibility to Gaeumannomyces graminis var. tritici and influence on Pseudomonas fluorescence numbers in the rhizosphere. Australas Plant Pathol 45:595–607

    Article  Google Scholar 

  • Yarham DJ (1981) Practical aspects of epidemiology and control. In: Asher MJC, Shipton PJ (eds) Biology and control of take-all. Academic Press, London, pp 353–384

    Google Scholar 

Download references

Acknowledgements

We thank the cereal grower, Colin Hurst, for supply of land for soil; and Mark O’Hara of New Zealand Arable and Rob Craigie of the Foundation for Arable Research for maintaining the original trial from which the soil for this study was taken. We thank Plant & Food Research staff Sandi Keenan for guidance in conducting qPCR diagnostics of Ggt DNA; Dr. Denis Curtin for interpreting N data; Dr. Trish Fraser for identifying earthworms; Dr. Hamish Brown and Joanna Sharp for interpreting crop residue decay rates; and Mike George for monitoring soil core conditions. Funding was provided by the New Zealand Ministry of Business Investment and Employment Project LINX 0804.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to R. F. van Toor.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

van Toor, R.F., Butler, R.C. & Cromey, M.G. Rate of decline of Gaeumannomyces graminis var. tritici inoculum and decomposition of residues from wheat cultivars. Australasian Plant Pathol. 47, 35–44 (2018). https://doi.org/10.1007/s13313-017-0526-8

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13313-017-0526-8

Keywords

Navigation