Skip to main content

Advertisement

Log in

Methane uptake in tropical soybean–wheat agroecosystem under different fertilizer regimes

  • Original Article
  • Published:
Environmental Earth Sciences Aims and scope Submit manuscript

Abstract

Methane (CH4) consumption in the rhizosphere of soybean and wheat was evaluated under different fertilizer management practice in a tropical vertisol. The soybean (Glycine max L.) and wheat (Triticum aestivum L.) were grown with inorganic, organic, and both (integrated) fertilizer regimes. Cattle dung manure (CDM), poultry manure (PM) and vermicompost (VC) were used as organic fertilizers. Apparent rate constant (k) of CH4 consumption (CH4 consumed g−1 soil d−1) and other soil parameters including pH, EC, bulk density (BD), organic C (OC), available N (AN), mean weight diameter (MWD) of soil aggregates, and water-soluble aggregates (WSA) were estimated. Parameters like crop biomass, and grain yield were estimated after harvesting of the crops. Abundance of methanotrophs, heterotrophs and ammonia oxidizers were estimated after the end of CH4 consumption. CH4 consumption was analyzed under 60 and 100 % moisture-holding capacity (MHC). CH4 consumption rate k varied from 0.34 to 0.58 in wheat and 0.08–0.59 in soybean. Rate k was in the order of organic > integrated > inorganic irrespective of the crop. Half-life t 1/2 (in day) of CH4 varied from 1.19 to 1.74 in wheat and 1.53–2.82 in the soybean. One-way analysis of variance (ANOVA) and Pearson’s correlation revealed significant relation (p < 0.0001) among the variables. The regression model fitted k linearly (p < 0.05) with the variables. Principal component analysis (PCA) explained 76.06 and 18.17 % of variation by the first two components. Result highlighted that organic farming can significantly decrease global atmospheric CH4 budget in addition to improving soil physical and biological properties.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  • Abdollahi L, Schjønning P, Elmholt S, Munkholm LJ (2014) The effects of organic matter application and intensive tillage and traffic on soil structure formation and stability. Soil Tillage Res 136:28–37

    Article  Google Scholar 

  • Adhya TK, Patnaik P, Rao VR, Sethunathan N (1996) Nitrification of ammonium in different components of a flooded rice soil system. Biol Fertil Soils 23:321–326

    Article  Google Scholar 

  • Ananyeva K, Wang W, Smucker AJM, Rivers ML, Kravchenko AN (2013) Can intra-aggregate pore structures affect the aggregate’s effectiveness in protecting carbon. Soil Biol Biochem 57:868–875

    Article  Google Scholar 

  • Anthony C (1982) The biochemistry of methylotrophs. Academic Press, London

  • Arthur E, Schjønning P, Moldrup P, Tuller M, de Jonge LW (2013) Density and permeability of a loess soil: long-term organic matter effect and the response to compressive stress. Geoderma 193:236–245

    Article  Google Scholar 

  • Bailey VL, McCue LA, Fansler SJ, Boyanov MI, DeCarlo F, Kemner KM, Konopka A (2013) Micrometer-scale physical structure and microbial composition of soil macroaggregates. Soil Biol Biochem 65:60–68

    Article  Google Scholar 

  • Barzegar AR, Yousefi A, Daryashenas A (2002) The effect of addition of different amounts and types of organic materials on soil physical properties and yield of wheat. Plant Soil 247:295–301

    Article  Google Scholar 

  • Bedard C, Knowles R (1989) Physiology, biochemistry, and specific inhibitors of CH4, NH4+ and CO oxidation by methanotrophs and nitrifiers. Microbiol Mol Biol Rev 53:68–84

    Google Scholar 

  • Bennett JM, Cattle SR (2013) Adoption of soil health improvement strategies by Australian farmers: I. attitudes, management and extension implications. J Agric Educ Ext 19:407–426

    Article  Google Scholar 

  • Blaud A, Chevallier T, Virto I, Pablo A-L, Chenu C, Brauman A (2014) Bacterial community structure in soil microaggregates and on particulate organic matter fractions located outside or inside soil macroaggregates. Pedobiologia 57:191–194

    Article  Google Scholar 

  • Bodelier PLE, Roslev P, Henckel T, Frenzel P (2000) Stimulation by ammonium-based fertilizers of methane oxidation in soil around rice roots. Nature 403:421–424. doi:10.1038/35000193

    Article  Google Scholar 

  • Brown KH, Bach EM, Drijber RA, Hofmockel KS, Jeske ES, Sawyer JE, Castellano MJ (2014) A long-term nitrogen fertilizer gradient has little effect on soil organic matter in a high-intensity maize production system. Glob Change Biol 20:1339–1350

    Article  Google Scholar 

  • Bruns MA (2014) Sustainable Soil Health. In: Plant biotechnology. Springer, pp 209–223. doi:10.1007/978-3-319-06892-3_17

  • Canadell JG, Schulze ED (2014) Global potential of biospheric carbon management for climate mitigation. Nat Commun, 5. doi:10.1038/ncomms628

  • Celik I, Ortas I, Kilic S (2004) Effects of compost, mycorrhiza, manure and fertilizer on some physical properties of a Chromoxerert soil. Soil Tillage Res 78:59–67

    Article  Google Scholar 

  • Clarkson CR, Solano N, Bustin RM, Bustin AMM, Chalmers GRL, He L, Melnichenko YB, Radliński AP, Blach TP (2013) Pore structure characterization of North American shale gas reservoirs using USANS/SANS, gas adsorption, and mercury intrusion. Fuel 103:606–616

    Article  Google Scholar 

  • Coates JD, Cole KA, Chakraborty R, O’Connor SM, Achenbach LA (2002) Diversity and ubiquity of bacteria capable of utilizing humic substances as electron donors for anaerobic respiration. Appl Environ Microbiol 68:2445–2452

    Article  Google Scholar 

  • Coleman DC, Zhang W, Fu S (2014) Toward a holistic approach to soils and plant growth. In: Interactions in soil: promoting plant growth, vol 1. Springer, pp 211–223

  • Conrad R (1996) Soil microoragnisms as control of atmospheric trace gases, CH2, CO, CH4, OCS, N2O, and NO. Microbiol Rev 60:609–640

    Google Scholar 

  • Devine S, Markewitz D, Hendrix P, Coleman D (2014) Soil aggregates and associated organic matter under conventional tillage, no-tillage, and forest succession after three decades. PLoS One 9:e84988

    Article  Google Scholar 

  • Doran JW, Mielke LN (1984) A rapid, low-cost method for determination of soil bulk density. Soil Sci Soc Am J 48:717–719

    Article  Google Scholar 

  • Graham DW, Korich DG, LeBlanc RP, Sinclair NA, Arnold RG (1992) Applications of a colorimetric plate assay for soluble methane monooxygenase activity. Appl Environ Microbiol 58:2231–2236

    Google Scholar 

  • Hanson RS, Hanson TE (1996) Methanotrophic bacteria. Microbiol Rev 60:439–471

    Google Scholar 

  • Hütsch BW (2001) Methane oxidation in non-flooded soils as affected by crop production. Eur J Agron 14:237–260

    Article  Google Scholar 

  • Johnson RA, Wichern DW (1982) Applied multivariate statistical analysis. Prentice-Hall, New Delhi

    Google Scholar 

  • Kollah B, Dubey G, Dunfield P, Mohanty SR (2014) Influence of bioenergy crop Jatropha curcas amendment on soil biogeochemistry in a tropical vertisol. Mitig Adapt Strateg Glob Change, 1–12

  • Kruger M, Frenzel P (2003) Effects of N-fertilisation on CH4 oxidation and production, and consequences for CH4 emissions from microcosms and rice fields. Glob Change Biol 9:773–784

    Article  Google Scholar 

  • Kumar R, Rawat KS, Singh J, Singh A, Rai A (2013) Soil aggregation dynamics and carbon sequestration. J Appl Nat Sci 5:250–267

    Google Scholar 

  • Lüke C, Frenzel P, Ho A, Fiantis D, Schad P, Schneider B, Schwark L, Utami SR (2014) Macroecology of methane-oxidizing bacteria: the β-diversity of pmoA genotypes in tropical and subtropical rice paddies. Environ Microbiol 16:72–83

    Article  Google Scholar 

  • Mäder P, Fliessbach A, Dubois D, Gunst L, Fried P, Niggli U (2002) Soil fertility and biodiversity in organic farming. Science 296:1694–1697

    Article  Google Scholar 

  • McDaniel MD, Tiemann LK, Grandy AS (2014) Does agricultural crop diversity enhance soil microbial biomass and organic matter dynamics? A meta-analysis. Ecol Appl 24:560–570

    Article  Google Scholar 

  • Megmw SR, Knowles R (1987) Active methanotrophs suppress nitrification in a humisol. Biol Fertil Soils 4:205–212

    Article  Google Scholar 

  • Miralles I, Trasar-Cepeda C, Leirós MC, Gil-Sotres F (2013) Labile carbon in biological soil crusts in the Tabernas desert, SE Spain. Soil Biol Biochem 58:1–8

    Article  Google Scholar 

  • Mohanty SR, Bharati K, Deepa N, Rao VR, Adhya TK (2000) Influence of heavy metals on methane oxidation in tropical rice soils. Ecotoxicol Environ Saf 47:277–284

    Article  Google Scholar 

  • Mohanty SR, Bodelier PL, Floris V, Conrad R (2006) Differential effects of nitrogenous fertilizers on methane-consuming microbes in rice field and forest soils. Appl Environ Microbiol 72:1346

    Article  Google Scholar 

  • Mohanty SR, Bodelier PLE, Conrad R (2007) Effect of temperature on composition of the methanotrophic community in rice field and forest soil. FEMS Microbiol Ecol 62:24–31

    Article  Google Scholar 

  • Mohanty SR, Kollah B, Sharma VK, Singh AB, Singh M, Rao AS (2014a) Methane oxidation and methane driven redox process during sequential reduction of a flooded soil ecosystem. Ann Microbiol 64:65–74

    Article  Google Scholar 

  • Mohanty SR, Rajput P, Kollah B, Chourasiya D, Tiwari A, Singh M, Rao AS (2014b) Methane oxidation and abundance of methane oxidizers in tropical agricultural soil (vertisol) in response to CuO and ZnO nanoparticles contamination. Environ Monit Assess 186:3743–3753

    Article  Google Scholar 

  • Nichols KA, Halvorson JJ (2013) Roles of biology, chemistry, and physics in soil macroaggregate formation and stabilization. Open Agric J 7:107–117

    Article  Google Scholar 

  • Ortas I, Akpinar C, Lal R (2013) Long-term impacts of organic and inorganic fertilizers on carbon sequestration in aggregates of an entisol in Mediterranean Turkey. Soil Sci 178:12–23

    Article  Google Scholar 

  • Osman KT (2013) Soil degradation, conservation and remediation. Springer

  • Plaza-Bonilla D, Cantero-Martínez C, Bareche J, Arrúe JL, Álvaro-Fuentes J (2014) Soil carbon dioxide and methane fluxes as affected by tillage and N fertilization in dryland conditions. Plant Soil 381:111–130

    Article  Google Scholar 

  • Rabbi SF, Tighe M, Cowie A, Wilson BR, Schwenke G, Mcleod M, Badgery W, Baldock J (2014) The relationships between land uses, soil management practices, and soil carbon fractions in South Eastern Australia. Agric Ecosyst Environ 197:41–52

    Article  Google Scholar 

  • Rand MC, Greenberg AE, Taras MJ (1976) Standard methods for the examination of water and wastewater. Am Public Health Assoc

  • Schmidt EL, Belser LW (1982) Nitrifying bacteria. Methods Soil Anal. Part 2, pp 1027–1042

  • Soane BD, van Ouwerkerk C (2013) Effects of compaction on soil aeration properties. Soil Compact Crop Prod 11:167

    Google Scholar 

  • Spaccini R, Piccolo A (2013) Effects of field managements for soil organic matter stabilization on water-stable aggregate distribution and aggregate stability in three agricultural soils. J Geochem Explor 129:45–51

    Article  Google Scholar 

  • Sullivan BW, Selmants PC, Hart SC (2014) What is the relationship between soil methane oxidation and other C compounds?. Glob, Change Biol 20:2381–2382

    Article  Google Scholar 

  • Van Bavel CHM (1949) Mean weight diameter of soil aggregates as a statistical index of aggregation. Soil Sci Soc Am J 14(C):20–23

    Article  Google Scholar 

  • Videla C, Trivelin PC, Studdert GA, Bendasolli JA (2014) Dynamics of gross nitrogen transformations related to particle-size soil organic fractions in the southeastern Pampa of Argentina. Sustain Agroecosystems Clim Change Mitig, p 135

  • Vieweger A, Döring TF (2014) Assessing health in agriculture—towards a common research framework for soils, plants, animals, humans and ecosystems. J Sci Food Agric 95:438–446

    Article  Google Scholar 

  • Virmani SM, Rao MR, Srivastava KL (1989) Approaches to the management of vertisols in the semi-arid tropics: the ICRISAT experience. In Management of vertisols for improved agricultural production. Proc. IBSRAM Inaug. Workshop 18–22 Feb 1985 ICRISAT Patancheru India Burford J R Sahrawat K (eds) Patancheru 502 324 Andhra Pradesh India Int. Crops Res Inst Semi-Arid Trop, pp 17–33

  • Walkley A, Black IA (1934) An examination of Degtjareff method for determining soil organic matter and a proposed modification of the chromic acid extraction method. Soil Sci 37:29–38

    Article  Google Scholar 

  • Whittenbury R, Phillips KC, Wilkinson JF (1970) Enrichment, isolation and some properties of methane-utilizing bacteria. J Gen Microbiol 61:205–218

    Article  Google Scholar 

  • Xue K, Wu L, Deng Y, He Z, Van Nostrand J, Robertson PG, Schmidt TM, Zhou J (2013) Functional gene differences in soil microbial communities from conventional, low-input, and organic farmlands. Appl Environ Microbiol 79:1284–1292

    Article  Google Scholar 

  • Yoder RE (1936) A direct method of aggregate analysis of soils and a study of the physical nature of erosion losses. Agron J 28:337–351

    Article  Google Scholar 

  • Zhang H, Ding W, He X, Yu H, Fan J, Liu D (2014) Influence of 20–year organic and inorganic fertilization on organic carbon accumulation and microbial community structure of aggregates in an intensively cultivated sandy loam soil. PLoS One 9:e92733

    Article  Google Scholar 

  • Zhou H, Peng X, Perfect E, Xiao T, Peng G (2013) Effects of organic and inorganic fertilization on soil aggregation in an Ultisol as characterized by synchrotron based X-ray micro-computed tomography. Geoderma 195:23–30

    Article  Google Scholar 

  • Zhuang Q, Chen M, Xu K, Tang J, Saikawa E, Lu Y, Melillo JM, Prinn RG, McGuire AD (2013) Response of global soil consumption of atmospheric methane to changes in atmospheric climate and nitrogen deposition. Glob Biogeochem Cycles 27:650–663

    Article  Google Scholar 

Download references

Acknowledgments

This research is part of the research project entitled “Structural and functional diversity of microorganisms in soil and rhizosphere” funded by ICAR-Indian Institute of Soil Science.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Santosh Mohanty.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Mohanty, S., Kollah, B., Chaudhary, R.S. et al. Methane uptake in tropical soybean–wheat agroecosystem under different fertilizer regimes. Environ Earth Sci 74, 5049–5061 (2015). https://doi.org/10.1007/s12665-015-4603-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12665-015-4603-4

Keywords

Navigation