Abstract
Cytochrome P450 monooxygenases (CYPs/P450s) are heme-thiolate proteins that are ubiquitously present in organisms, including non-living entities such as viruses. With the exception of self-sufficient P450s, all other P450 enzymes need electrons to perform their enzymatic activity and these electrons are supplied by P450 redox proteins. Different types of P450 redox proteins can be found in organisms and are classified into different classes. Bacterial P450s (class I) receive electrons from ferredoxins which are iron-sulfur cluster proteins. The presence of more than one copy and different types of ferredoxins within a bacterial species poses fundamental questions about the selectivity of P450s and ferredoxins in relation to each other. Apart from transferring electrons, ferredoxins have also been found to modulate P450 functions. Achieving an understanding of the interaction between ferredoxins and P450s is required to harness their biotechnological potential for designing a universal electron transfer protein. A brief overview of factors playing a role in ferredoxin and P450 interactions is presented in this review article.
Similar content being viewed by others
References
Bernhardt R (2006) Cytochromes P450 as versatile biocatalysts. J Biotechnol 124:128–145. https://doi.org/10.1016/j.jbiotec.2006.01.026
Campbell IJ, Bennett GN, Silberg JJ (2019) Evolutionary relationships between low potential ferredoxin and flavodoxin electron carriers. Front Energy Res 7:79
Fasan R (2012) Tuning P450 enzymes as oxidation catalysts ACS. Catalysis 2:647–666
Fleming BD, Tian Y, Bell SG, Wong LL, Urlacher V, Hill HAO (2003) Redox properties of cytochrome P450BM3 measured by direct methods. Eur J Biochem 270:4082–4088
Graham SE, Peterson JA (1999) How similar are P450s and what can their differences teach us? Arch Biochem Biophys 369:24–29
Guengerich FP, Johnson WW (1997) Kinetics of ferric cytochrome P450 reduction by NADPH− cytochrome P450 reductase: rapid reduction in the absence of substrate and variations among cytochrome P450 systems. Biochemistry 36:14741–14750
Guengerich FP, Munro AW (2013) Unusual cytochrome p450 enzymes and reactions. J Biol Chem 288:17065–17073. https://doi.org/10.1074/jbc.R113.462275
Hannemann F, Bichet A, Ewen KM, Bernhardt R (2007) Cytochrome P450 systems--biological variations of electron transport chains. Biochim Biophys Acta 1770:330–344. https://doi.org/10.1016/j.bbagen.2006.07.017
Harel A, Bromberg Y, Falkowski PG, Bhattacharya D (2014) Evolutionary history of redox metal-binding domains across the tree of life. Proc Natl Acad Sci 111:7042–7047
Hiruma Y et al (2013) The structure of the cytochrome P450cam–putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography. J Mol Biol 425:4353–4365
Hlavica P (2015) Mechanistic basis of electron transfer to cytochromes p450 by natural redox partners and artificial donor constructs. Adv Exp Med Biol 851:247–297. https://doi.org/10.1007/978-3-319-16009-2_10
Hlavica P, Schulze J, Lewis DF (2003) Functional interaction of cytochrome P450 with its redox partners: a critical assessment and update of the topology of predicted contact regions. J Inorg Biochem 96:279–297. https://doi.org/10.1016/s0162-0134(03)00152-1
Isin EM, Guengerich FP (2007) Complex reactions catalyzed by cytochrome P450 enzymes. Biochim Biophys Acta 1770:314–329. https://doi.org/10.1016/j.bbagen.2006.07.003
Klingenberg M (1958) Pigments of rat liver microsomes. Arch Biochem Biophys 75:376–386
Lamb DC et al (2019) On the occurrence of cytochrome P450 in viruses. Proc Natl Acad Sci 116:12343–12352
Lamb DC, Waterman MR (2013) Unusual properties of the cytochrome P450 superfamily. Philos Transact R Soc B: Biol Sci 368:20120434
Le-Huu P, Heidt T, Claasen B, Laschat S, Urlacher VB (2015) Chemo-, regio-, and stereoselective oxidation of the monocyclic diterpenoid β-cembrenediol by P450 BM3 ACS. Catalysis 5:1772–1780
Lewis DF, Hlavica P (2000) Interactions between redox partners in various cytochrome P450 systems: functional and structural aspects. Biochim Biophys Acta (BBA)-Bioenerg 1460:353–374
Li S, Du L, Bernhardt R (2020) Redox partners: function modulators of bacterial P450 Enzymes. Trends Microbiol 28:445–454
Liu J et al (2014) Metalloproteins containing cytochrome, iron–sulfur, or copper redox centers. Chem Rev 114:4366–4469
Miles CS, Ost TW, Noble MA, Munro AW, Chapman SK (2000) Protein engineering of cytochromes P-450. Biochim Biophys Acta (BBA)-Protein Struct Molec Enzymol 1543:383–407
Munro AW, Lindsay JG, Coggins JR, Kelly SM, Price NC (1995) NADPH oxidase activity of cytochrome P-450 BM3 and its constituent reductase domain. Biochim Biophys Acta (BBA)-Bioenerg 1231:255–264
Nelson DR (2018) Cytochrome P450 diversity in the tree of life. Biochim Biophys Acta, Proteins Proteomics 1866:141–154. https://doi.org/10.1016/j.bbapap.2017.05.003
Ortega Ugalde S et al (2018) Linking cytochrome P450 enzymes from Mycobacterium tuberculosis to their cognate ferredoxin partners. Appl Microbiol Biotechnol 102:9231–9242. https://doi.org/10.1007/s00253-018-9299-4
Page CC, Moser CC, Chen X, Dutton PL (1999) Natural engineering principles of electron tunnelling in biological oxidation–reduction. Nature 402:47–52
Page CC, Moser CC, Dutton PL (2003) Mechanism for electron transfer within and between proteins. Curr Opin Chem Biol 7:551–556
Roncel M, Kirilovsky D, Guerrero F, Serrano A, Ortega JM (2012) Photosynthetic cytochrome c550. Biochim Biophys Acta (BBA)-Bioenerg 1817:1152–1163
Sagadin T, Riehm J, Putkaradze N, Hutter MC, Bernhardt R (2019) Novel approach to improve progesterone hydroxylation selectivity by CYP 106A2 via rational design of adrenodoxin binding. FEBS J 286:1240–1249
Sagadin T, Riehm JL, Milhim M, Hutter MC, Bernhardt R (2018) Binding modes of CYP106A2 redox partners determine differences in progesterone hydroxylation product patterns. Commun Biol 1:1–9
Schilder J, Ubbink M (2013) Formation of transient protein complexes. Curr Opin Struct Biol 23:911–918
Sello MM et al (2015) Diversity and evolution of cytochrome P450 monooxygenases in Oomycetes. Sci Rep 5:11572. https://doi.org/10.1038/srep11572
Sevrioukova IF, Garcia C, Li H, Bhaskar B, Poulos TL (2003) Crystal structure of putidaredoxin, the [2Fe-2S] component of the P450cam monooxygenase system from Pseudomonas putida. J Mol Biol 333:377–392. https://doi.org/10.1016/j.jmb.2003.08.028
Sevrioukova IF, Li H, Zhang H, Peterson JA, Poulos TL (1999) Structure of a cytochrome P450–redox partner electron-transfer complex. Proc Natl Acad Sci 96:1863–1868
Sevrioukova IF, Poulos TL (2011) Structural biology of redox partner interactions in P450cam monooxygenase: a fresh look at an old system. Arch Biochem Biophys 507:66–74. https://doi.org/10.1016/j.abb.2010.08.022
Sirim D, Widmann M, Wagner F, Pleiss J (2010) Prediction and analysis of the modular structure of cytochrome P450 monooxygenases. BMC Struct Biol 10:34
Sono M, Roach MP, Coulter ED, Dawson JH (1996) Heme-containing oxygenases. Chem Rev 96:2841–2888
Strushkevich N, MacKenzie F, Cherkesova T, Grabovec I, Usanov S, Park HW (2011) Structural basis for pregnenolone biosynthesis by the mitochondrial monooxygenase system. Proc Natl Acad Sci U S A 108:10139–10143. https://doi.org/10.1073/pnas.1019441108
Syed K, Porollo A, Lam YW, Grimmett PE, Yadav JS (2013) CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes. Appl Environ Microbiol 79:2692–2702. https://doi.org/10.1128/AEM.03767-12
Tripathi S, Li H, Poulos TL (2013a) Structural basis for effector control and redox partner recognition in cytochrome P450. Science 340:1227–1230. https://doi.org/10.1126/science.1235797
Tripathi S, Li H, Poulos TL (2013b) Structural basis for effector control and redox partner recognition in cytochrome P450. Science 340:1227–1230
Wada A, Waterman MR (1992) Identification by site-directed mutagenesis of two lysine residues in cholesterol side chain cleavage cytochrome P450 that are essential for adrenodoxin binding. J Biol Chem 267:22877–22882
White RE, Coon MJ (1980) Oxygen activation by cytochrome P-450. Annu Rev Biochem 49:315–356. https://doi.org/10.1146/annurev.bi.49.070180.001531
Zhang L et al (2020) Structural insight into the electron transfer pathway of a self-sufficient P450 monooxygenase. Nat Commun 11:1–6
Zhang W et al (2018) Mechanistic insights into interactions between bacterial class I P450 enzymes and redox partners ACS. Catalysis 8:9992–10003
Acknowledgments
The authors want to thank Barbara Bradley, Pretoria, South Africa, for English language editing. The authors also thank the Proceedings of the National Academy of Sciences of the United States of America (PNAS, USA) for granting permission to use Figure 4 panel A, from the article: Sevrioukova IF, Li H, Zhang H, Peterson JA, Poulos TL (1999) Structure of a cytochrome P450–redox partner electron-transfer complex, Proceedings of the National Academy of Sciences 96:1863-1868.
Funding
Khajamohiddin Syed expresses sincere gratitude to the National Research Foundation (NRF), South Africa, for a research grant (Grant No. 114159). Zinhle Edith Chiliza thanks the NRF, South Africa, for a DST-NRF Innovation Master’s Scholarship for the year 2019 (Grant No. 117182).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interest.
Disclaimer
The funders had no role in the design of the study; the collection, analyses, and interpretation of data; the writing of the manuscript; or the decision to publish the results.
Additional information
Publisher’s note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Chiliza, Z.E., Martínez-Oyanedel, J. & Syed, K. An overview of the factors playing a role in cytochrome P450 monooxygenase and ferredoxin interactions. Biophys Rev 12, 1217–1222 (2020). https://doi.org/10.1007/s12551-020-00749-7
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12551-020-00749-7