Skip to main content
Log in

Responsible genes in children with primary vesicoureteral reflux: findings from the Chinese Children Genetic Kidney Disease Database

  • Original Article
  • Published:
World Journal of Pediatrics Aims and scope Submit manuscript

Abstract

Background

Primary vesicoureteral reflux (VUR) is a common congenital anomaly of the kidney and urinary tract (CAKUT) in childhood. The present study identified the possible genetic contributions to primary VUR in children.

Methods

Patients with primary VUR were enrolled and analysed based on a national multi-center registration network (Chinese Children Genetic Kidney Disease Database, CCGKDD) that covered 23 different provinces/regions in China from 2014 to 2019. Genetic causes were sought using whole-exome sequencing (WES) or targeted-exome sequencing.

Results

A total of 379 unrelated patients (male: female 219:160) with primary VUR were recruited. Sixty-four (16.9%) children had extrarenal manifestations, and 165 (43.5%) patients showed the coexistence of other CAKUT phenotypes. Eighty-eight patient (23.2%) exhibited impaired renal function at their last visit, and 18 of them (20.5%) developed ESRD at the median age of 7.0 (IQR 0.9–11.4) years. A monogenic cause was identified in 28 patients (7.39%). These genes included PAX2 (n = 4), TNXB (n = 3), GATA3 (n = 3), SLIT2 (n = 3), ROBO2 (n = 2), TBX18 (n = 2), and the other 11 genes (one gene for each patient). There was a significant difference in the rate of gene mutations between patients with or without extrarenal complications (14.1% vs. 6%, P = 0.035). The frequency of genetic abnormality was not statistically significant based on the coexistence of another CAKUT (9.6% vs. 5.6%, P = 0.139, Chi-square test) and the grade of reflux (9.4% vs. 6.7%, P = 0.429). Kaplan–Meier survival curve showed that the presence of genetic mutations did affect renal survival (Log-rank test, P = 0.01). PAX2 mutation carriers (HR 5.1, 95% CI 1.3–20.0; P = 0.02) and TNXB mutation carriers (HR 20.3, 95% CI 2.4–168.7; P = 0.01) were associated with increased risk of progression to ESRD.

Conclusions

PAX2, TNXB, GATA3 and SLIT2 were the main underlying monogenic causes and accounted for up to 46.4% of monogenic VUR. Extrarenal complications and renal function were significantly related to the findings of genetic factors in children with primary VUR. Like other types of CAKUT, several genes may be responsible for isolated VUR.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  1. Baracco R, Mattoo TK. Diagnosis and management of urinary tract infection and vesicoureteral reflux in the neonate. Clin Perinatol. 2014;41:633–42.

    Article  Google Scholar 

  2. Van der Ven AT, Vivante A, Hildebrandt F. Novel insights into the pathogenesis of monogenic congenital anomalies of the kidney and urinary tract. J AM Soc Nephrol. 2018;29:36–50.

    Article  Google Scholar 

  3. Nicolaou N, Renkema KY, Bongers EM, Giles RH, Knoers NV. Genetic, environmental, and epigenetic factors involved in CAKUT. Nat Rev Nephrol. 2015;11:720–31.

    Article  CAS  Google Scholar 

  4. Puri P, Gosemann JH, Darlow J, Barton DE. Genetics of vesicoureteral reflux. Nat Rev Urol. 2011;8:539–52.

    Article  CAS  Google Scholar 

  5. Song R, Yosypiv IV. Genetics of congenital anomalies of the kidney and urinary tract. Pediatr Nephrol. 2011;26:353–64.

    Article  Google Scholar 

  6. Adamiok-Ostrowska A, Piekiełko-Witkowska A. Ciliary genes in renal cystic diseases. Cells. 2020;9:907.

    Article  CAS  Google Scholar 

  7. Connaughton DM, Kennedy C, Shril S, Mann N, Murray SL, Williams PA, et al. Monogenic causes of chronic kidney disease in adults. Kidney Int. 2019;95:914–28.

    Article  Google Scholar 

  8. Van der Ven AT, Connaughton DM, Ityel H, Mann N, Nakayama M, Chen J, et al. Whole-exome sequencing identifies causative mutations in families with congenital anomalies of the kidney and urinary tract. J AM Soc Nephrol. 2018;29:2348–61.

    Article  Google Scholar 

  9. Bekheirnia MR, Bekheirnia N, Bainbridge MN, Gu S, Coban AZ, Gambin T, et al. Whole-exome sequencing in the molecular diagnosis of individuals with congenital anomalies of the kidney and urinary tract and identification of a new causative gene. Genet Med. 2017;19:412–20.

    Article  CAS  Google Scholar 

  10. Heidet L, Morinière V, Henry C, De Tomasi L, Reilly ML, Humbert C, et al. Targeted exome sequencing identifies PBX1 as involved in monogenic congenital anomalies of the kidney and urinary tract. J AM Soc Nephrol. 2017;28:2901–14.

    Article  CAS  Google Scholar 

  11. Vivante A, Hwang DY, Kohl S, Chen J, Shril S, Schulz J, et al. Exome sequencing discerns syndromes in patients from consanguineous families with congenital anomalies of the kidneys and urinary tract. J AM Soc Nephrol. 2017;28:69–75.

    Article  CAS  Google Scholar 

  12. Lei TY, Fu F, Li R, Wang D, Wang RY, Jing XY, et al. Whole-exome sequencing for prenatal diagnosis of fetuses with congenital anomalies of the kidney and urinary tract. Nephrol Dial Transpl. 2017;32:1665–75.

    Article  CAS  Google Scholar 

  13. Nicolaou N, Pulit SL, Nijman IJ, Monroe GR, Feitz WF, Schreuder MF, et al. Prioritization and burden analysis of rare variants in 208 candidate genes suggest they do not play a major role in CAKUT. Kidney Int. 2016;89:476–86.

    Article  CAS  Google Scholar 

  14. Hwang DY, Dworschak GC, Kohl S, Saisawat P, Vivante A, Hilger AC, et al. Mutations in 12 known dominant disease-causing genes clarify many congenital anomalies of the kidney and urinary tract. Kidney Int. 2014;85:1429–33.

    Article  CAS  Google Scholar 

  15. Saisawat P, Kohl S, Hilger AC, Hwang DY, Yung GH, Dworschak GC, et al. Whole-exome resequencing reveals recessive mutations in TRAP1 in individuals with CAKUT and VACTERL association. Kidney Int. 2014;85:1310–7.

    Article  CAS  Google Scholar 

  16. Weber S, Moriniere V, Knüppel T, Charbit M, Dusek J, Ghiggeri GM, et al. Prevalence of mutations in renal developmental genes in children with renal hypodysplasia: results of the ESCAPE study. J AM Soc Nephrol. 2006;17:2864–70.

    Article  CAS  Google Scholar 

  17. Nino F, Ilari M, Noviello C, Santoro L, Rätsch IM, Martino A, et al. Genetics of vesicoureteral reflux. Curr Genom. 2016;17:70–9.

    Article  CAS  Google Scholar 

  18. Lebowitz RL, Olbing H, Parkkulainen KV, Smellie JM, Tamminen-Möbius TE. International system of radiographic grading of vesicoureteric reflux. International Reflux Study in Children. Pediatr Radiol. 1985;15:105–9.

    Article  CAS  Google Scholar 

  19. Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, et al. Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 2015;17:405–24.

    Article  Google Scholar 

  20. Ahn YH, Lee C, Kim N, Park E, Kang HG, Ha IS, et al. Targeted exome sequencing provided comprehensive genetic diagnosis of congenital anomalies of the kidney and urinary tract. J Clin Med. 2020;9:751.

    Article  CAS  Google Scholar 

  21. Ishiwa S, Sato M, Morisada N, Nishi K, Kanamori T, Okutsu M, et al. Association between the clinical presentation of congenital anomalies of the kidney and urinary tract (CAKUT) and gene mutations: an analysis of 66 patients at a single institution. Pediatr Nephrol. 2019;34:1457–64.

    Article  Google Scholar 

  22. Siomou E, Mitsioni AG, Giapros V, Bouba I, Noutsopoulos D, Georgiou I. Copy-number variation analysis in familial nonsyndromic congenital anomalies of the kidney and urinary tract: Evidence for the causative role of a transposable element-associated genomic rearrangement. Mol Med Rep. 2017;15:3631–6.

    Article  CAS  Google Scholar 

  23. Sanna-Cherchi S, Kiryluk K, Burgess KE, Bodria M, Sampson MG, Hadley D, et al. Copy-number disorders are a common cause of congenital kidney malformations. AM J Hum Genet. 2012;91:987–97.

    Article  CAS  Google Scholar 

  24. Murugapoopathy V, Gupta IR. A primer on congenital anomalies of the kidneys and urinary tracts (CAKUT). Clin J Am Soc Nephrol. 2020;15:723–31.

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank all participating patients and their families. Also, we thank our coordinators from Chigene (Beijing), Translational Medical Research Center Co. Ltd., WuXi NextCODE's Shanghai, Beijing MyGenostics Co. Ltd., for sequencing technology support.

Funding

This work was supported by the Grant NSFC-81800602 from National Natural Science Foundation of China (Dr. Jia-Lu Liu); the Grant 20184Y0176 from Shanghai Municipal Commission of Health and Family Planning Youth Research Program (Dr. Jia-Lu Liu); the Grant SHDC12016107 from Shanghai Shenkang Hospital Developmental Center (Dr. Hong Xu); the Grant NSFC-81670609 from National Natural Science Foundation of China (Dr. Hong Xu); the Grant 2018YFA0801102 from National Key Research and Development Project (Dr. Hong Xu).

Author information

Authors and Affiliations

Authors

Consortia

Contributions

JLL, QS, MYW, GHZ, YFL are joint first authors. The roles of JLL, QS, MYW, GHZ and YFL are data curation, formal analysis, investigation, methodology, validation, visualization, writing—original draft, writing—review and editing. The roles of XWW, XST, YLB, YNG, JC, XYF, YHZ, GML, YBS, XJG, CHL, XYJ, SH, YLK, YLG, LPR, DL and SW are investigation and data curation. The role of BBW, DM, JR, QS and HX are writing—review and editing. The role of JLL and HX is funding acquisition. The roles of QS and HX are conceptualization, resources, supervision and project administration. All authors have seen and approved the final version of the manuscript.

Corresponding author

Correspondence to Hong Xu.

Ethics declarations

Ethical approval

The study was approved by the Children’s Hospital of Fudan University’ Ethical Committee (no. 2017-56), and informed consent was obtained for all research individuals.

Conflict of interest

Author Hong Xu is a member of the Editorial Board for World Journal of Pediatrics. The paper was handled by the other Editor and has undergone rigorous peer review process. Author Hong Xu was not involved in the journal's review of, or decisions related to, this manuscript. All the other authors have no conflicts of interest to disclose.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary file1 (XLSX 8364 KB)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Liu, JL., Shen, Q., Wu, MY. et al. Responsible genes in children with primary vesicoureteral reflux: findings from the Chinese Children Genetic Kidney Disease Database. World J Pediatr 17, 409–418 (2021). https://doi.org/10.1007/s12519-021-00428-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12519-021-00428-x

Keywords

Navigation