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Das maßgeschneiderte Proteom: Proteinmodifikation durch Proteolyse

  • Wissenschaft · Special: Proteinanalytik
  • Proteomics
  • Published:
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Abstract

Site-specific proteolytic processing is an irreversible post-translational protein modification with essential regulatory functions. Dedicated methods enable proteome-wide characterization of differentially processed proteoforms based on their distinct protease-generated N termini. Exemplary profiling of murine glomeruli revealed processed forms of proteins with important functions in the renal filtration barrier. Altered processing was observed in cellular and animal models of glomerular disease.

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Literatur

  1. Klein T, Eckhard U, Dufour A et al. (2018) Proteolytic cleavage–mechanisms, function, and „omic“ approaches for a near-ubiquitous posttranslational modification. Chem Rev 118:1137–1168

    Article  CAS  PubMed  Google Scholar 

  2. Aebersold R, Mann M (2016) Mass-spectrometric exploration of proteome structure and function. Nature 537:347–355

    Article  CAS  PubMed  Google Scholar 

  3. Niedermaier S, Huesgen PF (2018) Positional proteomics for identification of secreted proteoforms released by site-specific processing of membrane proteins. Biochim Biophys Acta Proteins Proteom, doi: 10.1016/j.bbapap.2018.09.004

    Google Scholar 

  4. Kleifeld O, Doucet A, auf dem Keller U et al. (2010) Isotopic labeling of terminal amines in complex samples identifies protein N-Termini and protease cleavage products. Nat Biotechnol 28:281–288

    Article  CAS  PubMed  Google Scholar 

  5. Demir F, Niedermaier S, Kizhakkedathu JN et al. (2017) Profiling of protein N-termini and their modifications in complex samples. Methods Mol Biol 1574:35–50

    Article  CAS  PubMed  Google Scholar 

  6. Rinschen MM, Huesgen PF, Koch R (2018) The podocyte protease web: uncovering the gatekeepers of glomerular disease. Am J Physiol Renal Physiol, doi: 10.1152/ajprenal. 00380.2018

    Google Scholar 

  7. Rinschen MM, Hoppe AK, Grahammer F et al. (2017) N-degradomic analysis reveals a proteolytic network processing the podocyte cytoskeleton. J Am Soc Nephrol 28:2867–2878

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Kaplan JM, Kim SH, North KN et al. (2000) Mutations in ACTN4, encoding a-actinin-4, cause familial focal segmental glomerulosclerosis. Nat Genet 24:251–256

    Article  CAS  PubMed  Google Scholar 

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Authors

Corresponding authors

Correspondence to Fatih Demir, Andreas Perrar or Pitter F. Huesgen.

Additional information

Fatih Demir 2001–2006 Biologiestudium an der Universität Heidelberg. 2007–2010 Promotion in Pflanzenphysiologie an der Universität Würzburg. 2011–2014 Postdoc am Institut für Neuround Sinnesphysiologie des Uniklinikums Düsseldorf. 2014–2015 Postdoc in der Neurologischen Klinik des Uniklinikums Düsseldorf. Seit 2015 Postdoc am Forschungszentrum Jülich.

Andreas Perrar 2009–2011 Ausbildung zum biologisch-technischen Assistenten. 2011–2014 Bachelorstudium Biologie an der Universität zu Köln. 2014–2016 Masterstudium Plant Sciences an der Universität Bonn. Seit 2017 Doktorand am Forschungszentrum Jülich und an der Universität zu Köln.

Pitter Huesgen 1998–2002 Chemiestudium an den Universitäten Marburg und Stockholm, Schweden. 2003–2007 Promotion in Biologie und 2007–2008 Postdoc an der Universität Konstanz. 2008–2014 Postdoc an der University of British Columbia in Vancouver, Kanada. Seit 2014 Teamleiter am Forschungszentrum Jülich. Seit 2019 Professor für Proteindynamik und Proteolyse an der Universität zu Köln.

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Demir, F., Perrar, A. & Huesgen, P.F. Das maßgeschneiderte Proteom: Proteinmodifikation durch Proteolyse. Biospektrum 25, 41–44 (2019). https://doi.org/10.1007/s12268-019-1003-4

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  • DOI: https://doi.org/10.1007/s12268-019-1003-4

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