Skip to main content
Log in

Phylogeography, genetic diversity and demographic history of the Iranian Kurdish groups based on mtDNA sequences

  • RESEARCH ARTICLE
  • Published:
Journal of Genetics Aims and scope Submit manuscript

Abstract

Throughout the history of modern humans, the current Kurdish-inhabited area has served as part of a tricontinental crossroad for major human migrations. Also, a significant body of archaeological evidence points to this area as the site of Neolithic transition. To investigate the phylogeography, origins and demographic history, mtDNA D-loop region of individuals representing four Kurdish groups from Iran were analysed. Our data indicated that most of the Kurds mtDNA lineages belong to branches of the haplogroups with the Western Eurasian origin; with small fractions of the Eastern Eurasian and sub-Saharan African lineages. The low level of mtDNA diversity observed in the Havrami group presented a bias towards isolation or increased drift due to small population size; while in the Kurmanji group it indicated a bias towards drift or mass migration events during the 5–18th century AD. The Mantel test showed strong isolation by distance, and AMOVA results for global and regional scales confirmed that the geography had acted as the main driving force in shaping the current pattern of mtDNA diversity, rather than linguistic similarity. The results of demographic analyses, in agreement with archaeological data, revealed a recent expansion of the Kurds (∼9,500 years before present) related to the Neolithic transition from hunting and gathering, to farming and cattle breeding in the Near East. Further, the high frequencies of typical haplogroups for early farmers (H; 37.1%) and hunter-gatherers (U; 13.8%) in the Kurds may testify the earlier hunter-gatherers in the Kurdish-inhabited area that adopted and admixed the Kurds ancestors following the Neolithic transition.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1
Figure 2
Figure 3

Similar content being viewed by others

References

  • Al-Zahery N., Saunier J., Ellingson K., Parson W., Parsons T. and Irwin J. 2013 Characterization of mitochondrial DNA control region lineages in Iraq. Int. J. Legal Med. 127, 373–375.

    Article  PubMed  Google Scholar 

  • Azimzadeh-Irani M. 2011 Phylogeography and phylogenetic-linguistic relationship of the Iranian Tat groups using mtDNA D-loop region. MSc thesis, Faculty of Biological Sciences, Shahid Beheshti University, Tehran, Iran.

    Google Scholar 

  • Bellwood P. and Oxenham M. 2008 The expansions of farming societies and the role of the Neolithic demographic transition in The Neolithic demographic transition and its consequences (eds. O. Bar-Yosef and J. P. Bocquet-Appel), pp. 13–34. Springer, Netherland.

    Google Scholar 

  • Braidwood R. F. and Howe B. 1960 Prehistoric investigations in Iraq Kurdistan, 1st edition. University of Chicago Press, Illinois, USA.

    Google Scholar 

  • Braidwood R. J., Cambel H., Redman C. L. and Watson P. J. 1971 Beginnings of village-farming communities in southeastern Turkey. Proc. Natl. Acad. Sci. USA 68, 1236–1240.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Bulloch J. and Morris H. 1992 No friends but the mountains, 1st edition. Viking Penguin, New York, USA.

    Google Scholar 

  • Cardoso S., Valverde L., Alfonso-Sánchez M. A., Palencia-Madrid L., Elcoroaristizabal X., Algorta J. et al. 2013 The expanded mtDNA phylogeny of the Franco-Cantabrian region upholds the pre-neolithic genetic substrate of Basques. PLoS One 8, e67835.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Cavalli-Sforza L. L., Menozzi P. and Piazza A. 1994 The history and geography of human genes, 1st edition. Princeton University Press, Princeton, New Jersey, USA.

    Google Scholar 

  • Cheng B., Tang W., He L., Dong Y., Lu J., Lei Y. et al. 2008 Genetic imprint of the Mongol: signal from phylogeographic analysis of mitochondrial DNA. J. Hum. Genet. 53, 905–913.

    Article  PubMed  Google Scholar 

  • Comas D., Calafell F., Bendukidze N., Fananas L. and Bertranpetit J. 2000 Georgian and Kurd mtDNA sequence analysis shows a lack of correlation between languages and female genetic lineages. Am. J. Phys. Anthropol. 112, 5–16.

    Article  CAS  PubMed  Google Scholar 

  • Cumberland R. C. 1926 The Kurds. Muslim World 16, 150–157.

    Article  Google Scholar 

  • Diamond J. and Bellwood P. 2003 Farmers and their languages: the first expansions. Science 300, 597–603.

    Article  CAS  PubMed  Google Scholar 

  • Dixon P. 2003 VEGAN, a package of R functions for community ecology. J. Veg. Sci. 14, 927–930.

    Article  Google Scholar 

  • Excoffier L. and Lischer H. E. 2010 Arlequin, ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. 10, 564–567.

    Article  PubMed  Google Scholar 

  • Fraumene C., Belle E. M., Castrì L., Sanna S., Mancosu G., Cosso M. et al. 2006 High resolution analysis and phylogenetic network construction using complete mtDNA sequences in Sardinian genetic isolates. Mol. Biol. Evol. 23, 2101–2111.

    Article  CAS  PubMed  Google Scholar 

  • Fu Y. X. 1997 Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147, 915–925.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Fu Q., Rudan P., Pääbo S. and Krause J. 2012 Complete mitochondrial genomes reveal Neolithic expansion into Europe. PLoS One 7, e32473.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gupta A. K. 2004 Origin of agriculture and domestication of plants and animals linked to early Holocene climate amelioration . Curr. Sci. 87, 54–59.

    Google Scholar 

  • Hall T. A. 1999 BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95–98.

    CAS  Google Scholar 

  • Harpending H. 1994 Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Hum. Biol. 66, 591–600.

    CAS  PubMed  Google Scholar 

  • Hassanpour A. and Mojab S. 2005 Kurdish diaspora in encyclopedia of diasporas (ed. C. R. Ember, M. Ember and I. A. Skoggard), pp. 214–224. Springer, New York, USA.

  • Hoelzel A., Halley J., O’brien S., Campagna C., Arnborm T., Le Boeuf B. et al. 1993 Elephant seal genetic variation and the use of simulation models to investigate historical population bottlenecks. J. Hered. 84, 443–449.

    CAS  PubMed  Google Scholar 

  • Hurvich C. M. and Tsai C. -L. 1989 Regression and time series model selection in small samples. Biometrika 76, 297–307.

    Article  Google Scholar 

  • Ingman M. and Gyllensten U. 2006 A recent genetic link between Sami and the Volga-Ural region of Russia. Eur. J. Hum. Genet. 15, 115–120.

    Article  PubMed  Google Scholar 

  • Irwin J. A., Ikramov A., Saunier J., Bodner M., Amory S., Röck A. et al. 2010 The mtDNA composition of Uzbekistan: a microcosm of Central Asian patterns. Int. J. Legal Med. 124, 195–204.

    Article  PubMed  Google Scholar 

  • Izady M. R. 1992 The Kurds: A concise handbook, 1st edition. Taylor and Francis, London, UK.

    Google Scholar 

  • Kloss-Brandstätter A., Pacher D., Schönherr S., Weissensteiner H., Binna R., Specht G. et al. 2011 HaploGrep: a fast and reliable algorithm for automatic classification of mitochondrial DNA haplogroups. Hum. Mutat. 32, 25–32.

    Article  PubMed  Google Scholar 

  • Kumar S., Nei M., Dudley J. and Tamura K. 2008 MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform. 9, 299–306.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • MacKenzie D. N. 1962 Kurdish dialect: studies, 1st edition. Oxford University Press, London, UK.

    Google Scholar 

  • Madih A. A. 2007 The Kurds of Khorasan. Iran Caucasus 11, 11–31.

    Google Scholar 

  • Malyarchuk B., Derenko M., Denisova G. and Kravtsova O. 2010 Mitogenomic diversity in Tatars from the Volga-Ural region of Russia. Mol. Biol. Evol. 27, 2220–2226.

    Article  CAS  PubMed  Google Scholar 

  • Mantel N. 1967 The detection of disease clustering and a generalized regression approach. Cancer Res. 27, 209–220.

    CAS  PubMed  Google Scholar 

  • Meri J. W. 2005 Medieval Islamic civilization: an encyclopedia, 1st edition. Routledge, New York, USA.

    Google Scholar 

  • Meyer S., Weiss G. and von Haeseler A. 1999 Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions I and II of human mtDNA. Genetics 152, 1103–1110.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Mielnik-Sikorska M., Daca P., Malyarchuk B., Derenko M., Skonieczna K., Perkova M. et al. 2013 The history of Slavs inferred from complete mitochondrial genome sequences . PLoS One 8, e54360.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Nasidze I., Quinque D., Ozturk M., Bendukidze N. and Stoneking M. 2005 MtDNA and Y-chromosome variation in Kurdish groups. Ann. Hum. Genet. 69, 401–412.

    Article  CAS  PubMed  Google Scholar 

  • Posada D. 2008 jModelTest: phylogenetic model averaging . Mol. Biol. Evol. 25, 1253–1256.

    Article  CAS  PubMed  Google Scholar 

  • Quintana-Murci L., Chaix R., Wells R. S., Behar D. M., Sayar H., Scozzari R. et al. 2004 Where west meets east: the complex mtDNA landscape of the southwest and Central Asian corridor. Am. J. Hum. Genet. 74, 827–845.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ramos-Onsins S. E. and Rozas J. 2002 Statistical properties of new neutrality tests against population growth. Mol. Biol. Evol. 19, 2092–2100.

    Article  CAS  PubMed  Google Scholar 

  • Richards M., Macaulay V., Hickey E., Vega E., Sykes B., Guida V. et al. 2000 Tracing European founder lineages in the Near Eastern mtDNA pool. Am. J. Hum. Genet. 67, 1251–1276.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Schönberg A., Theunert C., Li M., Stoneking M. and Nasidze I. 2011 High-throughput sequencing of complete human mtDNA genomes from the Caucasus and West Asia: high diversity and demographic inferences. Eur. J. Hum. Genet. 19, 988–994.

    Article  PubMed  PubMed Central  Google Scholar 

  • Sigurðardottir S., Helgason A., Gulcher J. R., Stefansson K. and Donnelly P. 2000 The mutation rate in the human mtDNA control region. Am. J. Hum. Genet. 66, 1599–1609.

    Article  Google Scholar 

  • Slatkin M. and Hudson R. R. 1991 Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129, 555–562.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Tajima F. 1989 Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123, 585–595.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Tamura K. and Nei M. 1993 Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10, 512– 526.

    CAS  PubMed  Google Scholar 

  • Team R. C. 2012 R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.

    Google Scholar 

  • Van Oven M. and Kayser M. 2009 Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Hum. Mutat. 30, E386–E394.

    Article  PubMed  Google Scholar 

  • Volodko N. V., Starikovskaya E. B., Mazunin I. O., Eltsov N. P., Naidenko P. V., Wallace D. C. et al. 2008 Mitochondrial genome diversity in arctic Siberians, with particular reference to the evolutionary history of Beringia and Pleistocenic peopling of the Americas. Am. J. Hum. Genet. 82, 1084–1100.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Weber D., Stewart B. S., Garza J. C. and Lehman N. 2000 An empirical genetic assessment of the severity of the northern elephant seal population bottleneck. Curr. Biol. 10, 1287–1290.

    Article  CAS  PubMed  Google Scholar 

  • Yang L., Tan S., Yu H., Zheng B., Qiao E., Dong Y. et al. 2008 Gene admixture in ethnic populations in upper part of Silk Road revealed by mtDNA polymorphism. Sci. China C Life Sci. 51, 435–444.

    Article  CAS  PubMed  Google Scholar 

  • Zarei F. 2013 Phylogeography and phylogenetic-linguistic relationships of the Iranian Kurds using mtDNA D-Loop region. MSc thesis, Faculty of Biological Sciences, Shahid Beheshti University, Tehran, Iran.

    Google Scholar 

  • Zeder M. A. and Hesse B. 2000 The initial domestication of goats (Capra hircus) in the Zagros Mountains 10,000 years ago. Science 287, 2254–2257.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

We are grateful to all the original donors for providing blood samples, Esmail Majidi and Maryam Maali for assisting in the sampling, and Hassan Nazari for linguistic editing. We appreciate the anonymous reviewers for their valuable suggestions on the manuscript. This work which was extracted from a master thesis, supported in part by Faculty of Biological Sciences, Shahid Beheshti University.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to HASSAN RAJABI-MAHAM.

Additional information

Corresponding editor: RAJIVA RAMAN

Zarei F. and Rajabi-Maham H. 2016 Phylogeography, genetic diversity and demographic history of the Iranian Kurdish groups based on mtDNA sequences. J. Genet. 95, xx–xx

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

ZAREI, F., RAJABI-MAHAM, H. Phylogeography, genetic diversity and demographic history of the Iranian Kurdish groups based on mtDNA sequences. J Genet 95, 767–776 (2016). https://doi.org/10.1007/s12041-016-0692-4

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12041-016-0692-4

Keywords

Navigation