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Tuber turmericum sp. nov., a Chinese truffle species based on morphological and molecular data

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Abstract

Based on molecular and morphological data, we describe and illustrate a new species of the genus Tuber, T. turmericum sp. nov., in this paper. Tuber turmericum is characterized by its turmeric yellow gleba, consistently one-spored asci and pale yellow to yellow globose ascospores. Phylogenetically, the new species belongs to the T. turmericum-group (= japonicum group sensu Kinoshita et al.).

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References

  • Alfaro ME, Zoller S, Lutzoni F (2003) Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov ChainMonte Carlo sampling and bootstrapping in assessing phylogenetic confidence. Mol Biol Evol 20:255–266. doi:10.1093/molbev/msg028

    Article  CAS  PubMed  Google Scholar 

  • Bonito G, Smith ME, Nowak M, Healy RA, Guevara G, Cazares E, Kinoshita A, Nouhra ER, Dominguez LS, Tedersoo L, Murat C, Wang Y, Moreno BA, Pfister DH, Nara K, Zambonelli A, Trappe JM, Vilgalys R (2013) Historical biogeography and diversification of truffles in the tuberaceae and their newly identified southern hemisphere sister lineage. PLoS ONE 8(1), E52765. doi:10.1371/journal.pone.0052765

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Castresana J (2000) Selection of conserved blocks frommultiple alignments and their use in phylogenetic analysis. Mol Biol Evol 17:540–552. doi:10.1093/oxfordjournals.molbev.a026334

    Article  CAS  PubMed  Google Scholar 

  • Dring DM (1971) Techniques for microscopic preparation. In: Booth C (ed) Methods in microbiology, vol 4. Academic, New York, p 98

  • Fan L, Feng S, Cao JZ (2014) The phylogenetic position of Tuber glabrum sp. nov. and T. sinomonosporum nom. nov., two Paradoxa-like truffle species from China. Mycol Prog 13:241–246. doi:10.1007/s11557-013-0908-4

    Article  Google Scholar 

  • Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118. doi:10.1111/j.1365-294X.1993.tb00005.x

    Article  CAS  PubMed  Google Scholar 

  • Hillis DM, Bull JJ (1993) An empirical test of bootstrapping as amethod for assessing confidence in phylogenetic analysis. Syst Biol 42:182–192. doi:10.1093/sysbio/42.2.182

    Article  Google Scholar 

  • Jeandroz S, Murat C, Wang Y, Bonfante P, Le Tacon F (2008) Molecular phylogeny and historical biogeography of the genus Tuber, the ‘true truffles’. J Biogeogr 35:815–829

  • Kinoshita A, Sasaki H, Nara K (2011) Phylogeny and diversity of Japanese truffles (Tuber spp.) inferred from sequences of four nuclear loci. Mycologia 103:779–794. doi:10.3852/10-138

    Article  PubMed  Google Scholar 

  • Löytynoya A, Goldman N (2005) An algorithm for progressive multiple alignment of sequences with insertions. Proc Natl Acad Sci USA 102:10557–10562

  • Nylander J (2004) MrModeltest2.2. Computer software distributed by the Evolutionary Biology Centre, University of Uppsala, Uppsala

  • Page RD (2001) TreeView. Glasgow University, Glasgow

  • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574. doi:10.1093/bioinformatics/btg180

    Article  CAS  PubMed  Google Scholar 

  • Stamatakis A (2006) RAxML-VI-HPC: maximum-Likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690. doi:10.1093/bioinformatics/btl446

    Article  CAS  PubMed  Google Scholar 

  • Stamatakis A, Ludwig T, Meier H (2005) RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics 21:456–463. doi:10.1093/bioinformatics/bti191

    Article  CAS  PubMed  Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA et al (eds) PCR Protocols: a Guide to Methods and Applications. Academic, San Diego, pp 315–322

    Google Scholar 

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Acknowledgments

The study was supported by the National Natural Science Foundation of China (No. 31270058) and the Beijing Natural Science Foundation (No. 5122003).

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Correspondence to Li Fan.

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Section Editor: Franz Oberwinkler

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Fan, L., Liu, X. & Cao, J. Tuber turmericum sp. nov., a Chinese truffle species based on morphological and molecular data. Mycol Progress 14, 111 (2015). https://doi.org/10.1007/s11557-015-1134-z

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  • DOI: https://doi.org/10.1007/s11557-015-1134-z

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