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Occurrence and dissemination of antibiotic resistance genes in the Yellow River basin: focused on family farms

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Abstract

As an emerging contaminant, antibiotic resistance genes (ARGs) have attracted growing attention, owing to their widespread dissemination and potential risk in the farming environment. However, ARG pollution from family livestock farms in the Yellow River basin, one of the main irrigation water sources in the North China Plain, remains unclear. Herein, we targeted 21 typical family farms to assess the occurrence patterns of ARGs in livestock waste and its influence on ARGs in receiving environment by real-time quantitative PCR (qPCR). Results showed that common ARGs were highly prevalent in family livestock waste, and tet-ARGs and sul-ARGs were the most abundant in these family farms. Most ARG levels in fresh feces of different animals varied, as the trend of chicken farms (broilers > laying hens) > swine farms (piglets > fattening pigs > boars and sows) > cattle farms (dairy cattle > beef cattle). The effect of natural composting on removing ARGs for chicken manure was better than that for cattle manure, while lagoon storage was not effective in removing ARGs from family livestock wastewater. More troublesomely, considerable amounts of ARGs were discharged with manure application, further leading to the ARG increase in farmland soil (up to 58–119 times), which would exert adverse impacts on human health and ecological safety.

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References

  • Bharatham N, Bhowmik P, Aoki M, Okada U, Sharma S, Yamashita E, Murakami S (2021) Structure and function relationship of OqxB efflux pump from Klebsiella pneumoniae. Nat Commun 12(1):5400

    ADS  CAS  PubMed  PubMed Central  Google Scholar 

  • Cao Y, Zhao J, Wang Q, Bai S, Yang Q, Wei Y, Wang R (2022) Industrial aerobic composting and the addition of microbial agents largely reduce the risks of heavy metal and ARG transfer through livestock manure. Ecotox Environ Safe 239:113694

    CAS  Google Scholar 

  • Chajęcka-Wierzchowska W, Zadernowska A, Zarzecka U, Zakrzewski A, Gajewska J (2019) Enterococci from ready-to-eat food–horizontal gene transfer of antibiotic resistance genes and genotypic characterization by PCR melting profile. J Sci Food Agr 99(3):1172–1179

    Google Scholar 

  • Chaturvedi P, Singh A, Chowdhary P, Pandey A, Gupta P (2021) Occurrence of emerging sulfonamide resistance (sul1 and sul2) associated with mobile integrons-integrase (intI1 and intI2) in riverine systems. Sci Total Environ 751:142217

    ADS  CAS  PubMed  Google Scholar 

  • Chee-Sanford JC, Mackie RI, Koike S, Krapac IG, Lin YF, Yannarell AC, Maxwell S, Aminov RI (2009) Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste. J Environ Qual 38(3):1086–1108

    CAS  PubMed  Google Scholar 

  • Chen P, Yu K, He Y (2023) The dynamics and transmission of antibiotic resistance associated with plant microbiomes. Environ Int 176:107986

  • Chen Q, An X, Li H, Su J, Ma Y, Zhu YG (2016) Long-term field application of sewage sludge increases the abundance of antibiotic resistance genes in soil. Environ Int 92:1–10

    PubMed  Google Scholar 

  • Chen T, Zhang S, Zhu R, Zhao M, Zhang Y, Wang Y, Liao X, Wu Y, Mi J (2022) Distribution and driving factors of antibiotic resistance genes in treated wastewater from different types of livestock farms. Sci Total Environ 849:157837

    ADS  CAS  PubMed  Google Scholar 

  • Cheng Y, Li Y, Yu R, Ma M, Yang M, Si H (2022) Identification of novel tet (X3) variants resistant to tigecycline in Acinetobacter species. Microbiol Spectr 10(6):e01333–e01322

    PubMed  PubMed Central  Google Scholar 

  • Duan M, Gu J, Wang X, Li Y, Zhang R, Hu T, Zhou B (2019) Factors that affect the occurrence and distribution of antibiotic resistance genes in soils from livestock and poultry farms. Ecotox Environ Safe 180:114–122

    CAS  Google Scholar 

  • Dungan RS, Strausbaugh CA, Leytem AB (2019) Survey of selected antibiotic resistance genes in agricultural and non-agricultural soils in south-central Idaho. FEMS Microbiol Eco 95(6):fiz071

    CAS  Google Scholar 

  • Esperón F, Albero B, Ugarte-Ruíz M, Domínguez L, Carballo M, Tadeo JL, Del Mar DM, Moreno MA, de la Torre A (2020) Assessing the benefits of composting poultry manure in reducing antimicrobial residues, pathogenic bacteria, and antimicrobial resistance genes: a field-scale study. Environ Sci Pollut R 27:27738–27749

    Google Scholar 

  • Fu Y, Chen Y, Liu D, Yang D, Liu Z, Wang Y, Wang J, Wang X, Xu X, Li X, He J, Jiang J, Zhai W, Huang L, He T, Xia X, Cai C, Wang Y, Jiang H (2021) Abundance of tigecycline resistance genes and association with antibiotic residues in Chinese livestock farms. J Hazard Mater 409:124921

    CAS  PubMed  Google Scholar 

  • Gaballah MS, Guo J, Sun H, Aboagye D, Sobhi M, Muhmood A, Dong R (2021) A review targeting veterinary antibiotics removal from livestock manure management systems and future outlook. Bioresource Technol 333:125069

    CAS  Google Scholar 

  • Goulas A, Belhadi D, Descamps A, Andremont A, Benoit P, Courtois S, Dagot C, Grall N, Makowski D, Nazaret S, Nélieu S, Patureau D, Petit F, Roose-Amsaleg C, Vittecoq M, Livoreil B, Laouénan C (2020) How effective are strategies to control the dissemination of antibiotic resistance in the environment? A systematic review. Environ Evid 9(1):1–32

    Google Scholar 

  • Gu Y, Shen S, Han B, Tian X, Yang F, Zhang K (2020) Family livestock waste: an ignored pollutant resource of antibiotic resistance genes. Ecotox Environ Safe 197:110567

    CAS  Google Scholar 

  • Guo X, Akram S, Stedtfeld R, Johnson M, Chabrelie A, Yin D, Mitchell J (2021) Distribution of antimicrobial resistance across the overall environment of dairy farms–A case study. Sci Total Environ 788:147489

    ADS  CAS  PubMed  Google Scholar 

  • Haley BJ, Kim SW, Salaheen S, Hovingh E, Van Kessel JAS (2020) Differences in the microbial community and resistome structures of feces from preweaned calves and lactating dairy cows in commercial dairy herds. Foodborne Pathog Dis 17(8):494–503

    CAS  PubMed  Google Scholar 

  • Han B, Yang F, Tian X, Mu M, Zhang K (2021a) Tracking antibiotic resistance gene transfer at all seasons from swine waste to receiving environments. Ecotox Environ Safe 219:112335

    CAS  Google Scholar 

  • Han H, Bai M, Chen Y, Gong Y, Wu M, Yang H, Chen Q, Xu T, Wei Y, Ding G, Li J (2021b) Dynamics of diversity and abundance of sulfonamide resistant bacteria in a silt loam soil fertilized by compost. Antibiotics 10(6):699

    CAS  PubMed  PubMed Central  Google Scholar 

  • He X, Xiong J, Yang Z, Han L, Huang G (2022) Exploring the impact of biochar on antibiotics and antibiotics resistance genes in pig manure aerobic composting through untargeted metabolomics and metagenomics. Bioresour Technol 352:127118

    CAS  PubMed  Google Scholar 

  • Hembach N, Bierbaum G, Schreiber C, Schwartz T (2022) Facultative pathogenic bacteria and antibiotic resistance genes in swine livestock manure and clinical wastewater: a molecular biology comparison. Environ Pollut 313:120128

    CAS  PubMed  Google Scholar 

  • Hou L, Wang H, Chen Q, Su JQ, Gad M, Li J, Hu A (2021) Fecal pollution mediates the dominance of stochastic assembly of antibiotic resistome in an urban lagoon (Yundang lagoon), China. J Hazard Mater 417:126083

    CAS  PubMed  Google Scholar 

  • Hsu CH, Li C, Hoffmann M, McDermott P, Abbott J, Ayers S, Zhao S (2019) Comparative genomic analysis of virulence, antimicrobial resistance, and plasmid profiles of Salmonella Dublin isolated from sick cattle, retail beef, and humans in the United States. Microb Drug Resis 25(8):1238–1249

    CAS  Google Scholar 

  • Huang X, Liu C, Li K, Su J, Zhu G, Liu L (2015) Performance of vertical up-flow constructed wetlands on swine wastewater containing tetracyclines and tet genes. Water Res 70:109–117

    CAS  PubMed  Google Scholar 

  • Jeong S, Kim JO, Yoon EJ, Bae IK, Lee W, Lee H, Jeong SH (2018) Extensively drug-resistant Escherichia coli sequence type 1642 carrying an IncX3 plasmid containing the blaKPC-2 gene associated with transposon Tn4401a. Ann Lab Med 38(1):17–22

    PubMed  Google Scholar 

  • Kang J, Liu Y, Chen X, Xu F, Wang H, Xiong W, Li X (2022) Metagenomic insights into the antibiotic resistomes of typical Chinese dairy farm environments. Front Microbiol 13:990272

    PubMed  PubMed Central  Google Scholar 

  • Kampouris ID, Agrawal S, Orschler L, Cacace D, Kunze S, Berendonk TU, Klümper U (2021) Antibiotic resistance gene load and irrigation intensity determine the impact of wastewater irrigation on antimicrobial resistance in the soil microbiome. Water Res 193:116818

    CAS  PubMed  Google Scholar 

  • Kivits T, Broers HP, Beeltje H, van Vliet M, Griffioen J (2018) Presence and fate of veterinary antibiotics in age-dated groundwater in areas with intensive livestock farming. Environ Pollut 241:988–998

    CAS  PubMed  Google Scholar 

  • Lai FY, Muziasari W, Virta M, Wiberg K, Ahrens L (2021) Profiles of environmental antibiotic resistomes in the urban aquatic recipients of Sweden using high-throughput quantitative PCR analysis. Environ Pollut 287:117651

    CAS  PubMed  Google Scholar 

  • Li H, Liu H, Qiu L, Xie Q, Chen B, Wang H, Long Y, Hu L, Fang C (2023) Mechanism of antibiotic resistance development in an activated sludge system under tetracycline pressure. Environ Sci Pollut R:1–14

    Google Scholar 

  • Li K, Cao R, Mo S, Yao R, Ren Z, Wu J (2020) Swine manure composting with compound microbial inoculants: removal of antibiotic resistance genes and their associations with microbial community. Front Microbiol 11:592592

    PubMed  PubMed Central  Google Scholar 

  • Li W, Li Y, Zheng N, Ge C, Yao H (2022) Occurrence and distribution of antibiotics and antibiotic resistance genes in the guts of shrimp from different coastal areas of China. Sci Total Environ 815:152756

    ADS  CAS  PubMed  Google Scholar 

  • Liang C, Wei D, Zhang S, Ren Q, Shi J, Liu L (2021) Removal of antibiotic resistance genes from swine wastewater by membrane filtration treatment. Ecotox Environ Safe 210:111885

    CAS  Google Scholar 

  • Liang C, Wei D, Yan W, Zhang S, Shi J, Liu L (2022) Fates of intracellular and extracellular antibiotic resistance genes during the cattle farm wastewater treatment process. Bioresource Technol 344:126272

    CAS  Google Scholar 

  • Lu XM, Li WF, Li CB (2017) Characterization and quantification of antibiotic resistance genes in manure of piglets and adult pigs fed on different diets. Environ Pollut 229:102–110

    CAS  PubMed  Google Scholar 

  • Luby EM, Moorman TB, Soupir ML (2016) Fate and transport of tylosin-resistant bacteria and macrolide resistance genes in artificially drained agricultural fields receiving swine manure. Sci Total Environ 550:1126–1133

    ADS  CAS  PubMed  Google Scholar 

  • Luiken RE, Heederik DJ, Scherpenisse P, Van Gompel L, van Heijnsbergen E, Greve GD, Schmitt H (2022) Determinants for antimicrobial resistance genes in farm dust on 333 poultry and pig farms in nine European countries. Environ Res 208:112715

    CAS  PubMed  Google Scholar 

  • Mencía-Ares O, Cabrera-Rubio R, Cobo-Díaz JF, Álvarez-Ordóñez A, Gómez-García M, Puente H, Argüello H (2020) Antimicrobial use and production system shape the fecal, environmental, and slurry resistomes of pig farms. Microbiome 8(1):1–17

    Google Scholar 

  • Mendieta-Pino CA, Pérez-Báez SO, Ramos-Martín A, León-Zerpa F, Brito-Espino S (2021) Natural treatment system for wastewater (NTSW) in a livestock farm, with five years of pilot plant management and monitoring. Chemosphere 285:131529

    CAS  PubMed  Google Scholar 

  • Nogrado K, Unno T, Hur HG, Lee JH (2021) Tetracycline-resistant bacteria and ribosomal protection protein genes in soils from selected agricultural fields and livestock farms. Appl Biol Chem 64(1):42

    CAS  Google Scholar 

  • Okamoto M, Kumagai M, Kanamori H, Takamatsu D (2021) Antimicrobial resistance genes in bacteria isolated from Japanese honey, and their potential for conferring macrolide and lincosamide resistance in the American foulbrood pathogen Paenibacillus larvae. Front Microbiol 12:667096

    PubMed  PubMed Central  Google Scholar 

  • Paulus GK, Hornstra LM, Medema G (2020) International tempo-spatial study of antibiotic resistance genes across the Rhine river using newly developed multiplex qPCR assays. Sci Total Environ 706:135733

    ADS  CAS  PubMed  Google Scholar 

  • Pazra DF, Latif H, Basri C, Wibawan IWT, Rahayu P (2023) Detection of tetracycline resistance genes and their diversity in Escherichia coli isolated from pig farm waste in Banten province, Indonesia. Vet World 16(9):1907

    PubMed  PubMed Central  Google Scholar 

  • Peng S, Zhang H, Song D, Chen H, Lin X, Wang Y, Ji L (2022) Distribution of antibiotic, heavy metals and antibiotic resistance genes in livestock and poultry feces from different scale of farms in Ningxia, China. J Hazard Mater 440:129719

    CAS  PubMed  Google Scholar 

  • Petrin S, Patuzzi I, Di Cesare A, Tiengo A, Sette G, Biancotto G, Corno G, Drigo M, Losasso M, Cibin V (2019) Evaluation and quantification of antimicrobial residues and antimicrobial resistance genes in two Italian swine farms. Environ Pollut 255:113183

    CAS  PubMed  Google Scholar 

  • Qian X, Gu J, Sun W, Wang XJ, Su JQ, Stedfeld R (2018) Diversity, abundance, and persistence of antibiotic resistance genes in various types of animal manure following industrial composting. J Hazard Mater 344:716–722

    CAS  PubMed  Google Scholar 

  • Qiu T, Huo L, Guo Y, Gao M, Wang G, Hu D, Li C, Wang Z, Liu G, Wang X (2022) Metagenomic assembly reveals hosts and mobility of common antibiotic resistome in animal manure and commercial compost. Environ Microbiol 17(1):42

    CAS  Google Scholar 

  • Rothrock MJ Jr, Min BR, Castleberry L, Waldrip H, Parker D, Brauer D, Pitta D, Indugu N (2021) Antibiotic resistance, antimicrobial residues, and bacterial community diversity in pasture-raised poultry, swine, and beef cattle manures. J Anim Sci 99(8):skab144

    PubMed  PubMed Central  Google Scholar 

  • Rovira P, McAllister T, Lakin SM, Cook SR, Doster E, Noyes NR, Weinroth MD, Yang X, Woerner DR, Belk KE, Morley PS (2019) Characterization of the microbial resistome in conventional and “raised without antibiotics” beef and dairy production systems. Front Microbiol 10:1980

    PubMed  PubMed Central  Google Scholar 

  • Ruiz J (2019) Transferable mechanisms of quinolone resistance from 1998 onward. Clin Microbiol Rev 32(4):10–1128

    Google Scholar 

  • Shen C, He M, Zhang J, Liu J, Su J, Dai J (2023) Effects of the coexistence of antibiotics and heavy metals on the fate of antibiotic resistance genes in chicken manure and surrounding soils. Ecotox Environ Safe 263:115367

    CAS  Google Scholar 

  • Shi X, Li Y, Yang Y, Shen Z, Cai C, Wang Y, Walsh TR, Shen J, Wang S (2021) High prevalence and persistence of carbapenem and colistin resistance in livestock farm environments in China. J Hazard Mater 406:124298

    CAS  PubMed  Google Scholar 

  • Si R, Yao Y, Liu X, Lu Q, Liu M (2022) Role of risk perception and government regulation in reducing over-utilization of veterinary antibiotics: evidence from hog farmers of China. One Health 15:100448

    PubMed  PubMed Central  Google Scholar 

  • Smiline Girija AS, Priyadharsini JV, Paramasivam A (2019) Plasmid-encoded resistance to trimethoprim/sulfamethoxazole mediated by dfrA1, dfrA5, sul1 and sul2 among Acinetobacter baumannii isolated from urine samples of patients with severe urinary tract infection. J Glob Antimicrob Resist 17:145–146

    Google Scholar 

  • Sobierajski T, Mazińska B, Chajęcka-Wierzchowska W, Śmiałek M, Hryniewicz W (2022) Antimicrobial and antibiotic resistance from the perspective of Polish veterinary students: an inter-university study. Antibiotics 11(1):115

    PubMed  PubMed Central  Google Scholar 

  • Sun W, Gu J, Wang X, Qian X, Tuo X (2018) Impacts of biochar on the environmental risk of antibiotic resistance genes and mobile genetic elements during anaerobic digestion of cattle farm wastewater. Bioresource Technol 256:342–349

    CAS  Google Scholar 

  • Vikesland P, Garner E, Gupta S, Kang S, Maile-Moskowitz A, Zhu N (2019) Differential drivers of antimicrobial resistance across the world. Accounts Chem Res 52(4):916–924

    CAS  Google Scholar 

  • Wang G, Kong Y, Yang Y, Ma R, Li L, Li G, Yuan J (2022) Composting temperature directly affects the removal of antibiotic resistance genes and mobile genetic elements in livestock manure. Environ Pollut 303:119174

    CAS  PubMed  Google Scholar 

  • Wang L, Wang J, Wang J, Zhu L, Yang L, Yang R (2019) Distribution characteristics of antibiotic resistant bacteria and genes in fresh and composted manures of livestock farms. Sci Total Environ 695:133781

    ADS  CAS  PubMed  Google Scholar 

  • Wang W, Baloch Z, Peng Z, Hu Y, Xu J, Fanning S, Li F (2017) Genomic characterization of a large plasmid containing a bla NDM-1 gene carried on Salmonella enterica serovar Indiana C629 isolate from China. BMC Infect Dis 17(1):1–8

    Google Scholar 

  • Wang Y, Li W, Deng Q, Huang Y, Zhou X, Guan Z, Yang Z, Xiang L, Chen Y (2023a) Identification of qnrVF in a multidrug-resistant Vibrio furnissii clinical strain. Microbiol Spectr 11(1):e01934–e01922

    PubMed  PubMed Central  Google Scholar 

  • Wang Y, Li Y, Li H, Zhou J, Wang T (2023b) Seasonal dissemination of antibiotic resistome from livestock farms to surrounding soil and air: bacterial hosts and risks for human exposure. J Environ Manage 325:116638

    CAS  PubMed  Google Scholar 

  • Wen X, Mi J, Wang Y, Ma B, Zou Y, Liao X, Liang JB, Wu Y (2019) Occurrence and contamination profiles of antibiotic resistance genes from swine manure to receiving environments in Guangdong Province southern China. Ecotox Environ Safe 173:96–102

    CAS  Google Scholar 

  • Wu T, Zhang Y, Wang B, Chen C, Cheng Z, Li Y, Li J (2022) Antibiotic resistance genes in Chishui River, a tributary of the Yangtze River, China: occurrence, seasonal variation and its relationships with antibiotics, heavy metals and microbial communities. Sci Total Environ 846:157472

    ADS  CAS  PubMed  Google Scholar 

  • Xu LS, Wang WZ, Deng JB, Xu WH (2023b) The residue of tetracycline antibiotics in soil and Brassica juncea var. gemmifera, and the diversity of soil bacterial community under different livestock manure treatments. Environ Geochem Health 45(1):7–17

    CAS  PubMed  Google Scholar 

  • Xu Y, Ma T, Yuan Z, Tian J, Zhao N (2023a) Spatial patterns in pollution discharges from livestock and poultry farm and the linkage between manure nutrients load and the carrying capacity of croplands in China. Sci Total Environ 901:166006

    ADS  CAS  PubMed  Google Scholar 

  • Yang F, Han B, Gu Y, Zhang K (2020b) Swine liquid manure: a hotspot of mobile genetic elements and antibiotic resistance genes. Sci Rep 10(1):15037

    CAS  PubMed  PubMed Central  Google Scholar 

  • Yang F, Gao Y, Zhao H, Li J, Cheng X, Meng L, Zhu J (2021b) Revealing the distribution characteristics of antibiotic resistance genes and bacterial communities in animal-aerosol-human in a chicken farm: from One-Health perspective. Ecotox Environ Safe 224:112687

    CAS  Google Scholar 

  • Yang F, Zhang K, Zhi S, Li J, Tian X, Gu Y, Zhou J (2019) High prevalence and dissemination of β-lactamase genes in swine farms in northern China. Sci Total Environ 651:2507–2513

    ADS  CAS  PubMed  Google Scholar 

  • Yang F, Zhang Z, Li Z, Han B, Zhang K, Yang P, Ding Y (2022) Prevalence of high-risk β-lactam resistance genes in family livestock farms in Danjiangkou Reservoir Basin, Central China. Int J Env Res Pub He 19(10):6036

    CAS  Google Scholar 

  • Yang Y, Chen Y, Cai Y, Xing S, Mi J, Liao X (2020a) The relationship between culturable doxycycline-resistant bacterial communities and antibiotic resistance gene hosts in pig farm wastewater treatment plants. Ecotox Environ Safe 206:111164

    CAS  Google Scholar 

  • Yang Y, Xing S, Chen Y, Wu R, Wu Y, Wang Y, Mi J, Liao X (2021a) Profiles of bacteria/phage-comediated ARGs in pig farm wastewater treatment plants in China: association with mobile genetic elements, bacterial communities and environmental factors. J Hazard Mater 404:124149

    CAS  PubMed  Google Scholar 

  • Yue Z, Zhang J, Zhou Z, Ding C, Wan L, Liu J, Wang X (2021) Pollution characteristics of livestock faeces and the key driver of the spread of antibiotic resistance genes. J Hazard Mater 409:124957

    CAS  PubMed  Google Scholar 

  • Zhang Q, Xu J, Wang X, Zhu W, Pang X, Zhao J (2021a) Changes and distributions of antibiotic resistance genes in liquid and solid fractions in mesophilic and thermophilic anaerobic digestion of dairy manure. Bioresource Technol 320:124372

    CAS  Google Scholar 

  • Zhang Y, Cheng D, Zhang Y, Xie J, Xiong H, Wan Y, Zhang Y, Chen X, Shi X (2021b) Soil type shapes the antibiotic resistome profiles of long-term manured soil. Sci Total Environ 786:147361

    ADS  CAS  PubMed  Google Scholar 

  • Zhang RM, Liao MN, Wu JE, Lu XQ, Tan HZ, Sun J, Liao XP, Liu YH (2022a) Metagenomic insights into the influence of mobile genetic elements on ARGs along typical wastewater treatment system on pig farms in China. Sci Total Environ 839:156313

    ADS  CAS  PubMed  Google Scholar 

  • Zhang K, Li K, Liu Z, Li Q, Li W, Chen Q, Yang F (2022b) The sources and potential hosts identification of antibiotic resistance genes in the Yellow River, revealed by metagenomic analysis. Int J Environ 19(16):10420

    CAS  Google Scholar 

  • Zhang K, Ruan R, Zhang Z, Zhi S (2022c) An exhaustive investigation on antibiotics contamination from livestock farms within sensitive reservoir water area: Spatial density, source apportionment and risk assessment. Sci Total Environ 847:157688

    ADS  CAS  PubMed  Google Scholar 

  • Zhang X, Ma C, Zhang W, Li W, Yu J, Xue D, Deng G (2020) Shifts in microbial community, pathogenicity-related genes and antibiotic resistance genes during dairy manure piled up. Microb Biotechnol 13(4):1039–1053

    PubMed  PubMed Central  Google Scholar 

  • Zhang Z, Yuan W (2023) Occurrence and distribution of antibiotics and antibiotic resistance genes in the different croplands along the Yellow River shoreline. Environ Res Commun 5:65011

  • Zhi S, Shen S, Zhou J, Ding G, Zhang K (2020) Systematic analysis of occurrence, density and ecological risks of 45 veterinary antibiotics: focused on family livestock farms in Erhai Lake basin, Yunnan, China. Environ Pollut 267:115539

    CAS  PubMed  PubMed Central  Google Scholar 

  • Zong S, Xu D, Zheng X, Zaeim D, Wang P, Han J, Qu D (2022) The diversity in antimicrobial resistance of MDR Enterobacteriaceae among Chinese broiler and laying farms and two mcr-1 positive plasmids revealed their resistance-transmission risk. Front Microbiol 13:912652

    PubMed  PubMed Central  Google Scholar 

  • Zhou X, Wang J, Lu C, Liao Q, Gudda FO, Ling W (2020) Antibiotics in animal manure and manure-based fertilizers: occurrence and ecological risk assessment. Chemosphere 255:127006

    CAS  PubMed  Google Scholar 

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Funding

This study was financially supported by the National Natural Science Foundation of China (42277033; 42077355), China Agriculture Research System (CARS-36), and the Talent Project of Agro-Environmental Protection Institute.

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Shimei Zheng: sampling, methodology, writing — original draft. Bingjun Han: visualization, methodology, writing — original draft. Yandong Wang: review and editing, sampling, methodology, software. Yongzhen Ding: conceptualization, review and editing, project administration. Ran Zhao: sampling and review, sample pretreatment. Fengxia Yang: methodology, review and editing, project administration, funding acquisition, supervision.

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Correspondence to Fengxia Yang.

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Zheng, ., Han, B., Wang, Y. et al. Occurrence and dissemination of antibiotic resistance genes in the Yellow River basin: focused on family farms. Environ Sci Pollut Res 31, 16328–16341 (2024). https://doi.org/10.1007/s11356-024-32290-5

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