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Nitrogen-metabolising microorganism analysis in rapid sand filters from drinking water treatment plant

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Abstract

Sand filters (SFs) are common treatment processes for nitrogen pollutant removal in drinking water treatment plants (DWTPs). However, the mechanisms on the nitrogen-cycling role of SFs are still unclear. In this study, 16S rRNA gene amplicon sequencing was used to characterise the diversity and composition of the bacterial community in SFs from DWTPs. Additionally, metagenomics approach was used to determine the functional microorganisms involved in nitrogen cycle in SFs. Our results showed that Pseudomonadota, Acidobacteria, Nitrospirae and Chloroflexi dominated in SFs. Subsequently, 85 high-quality metagenome-assembled genomes (MAGs) were retrieved from metagenome datasets of selected SFs involving nitrification, assimilatory nitrogen reduction, denitrification and anaerobic ammonia oxidation (anammox) processes. Read mapping to reference genomes of Nitrospira and the phylogenetic tree of the ammonia monooxygenase subunit A gene, amoA, suggested that Nitrospira is abundantly found in SFs. Furthermore, according to their genetic content, a nitrogen metabolic model in SFs was proposed using representative MAGs and pure culture isolate. Quantitative real-time polymerase chain reaction (qPCR) showed that ammonia-oxidising bacteria (AOB) and archaea (AOA), and complete ammonia oxidisers (comammox) were ubiquitous in the SFs, with the abundance of comammox being higher than that of AOA and AOB. Moreover, we identified a bacterial strain with a high NO3-N removal rate as Pseudomonas sp. DW-5, which could be applied in the bioremediation of micro-polluted drinking water sources. Our study provides insights into functional nitrogen-metabolising microbes in SFs of DWTPs.

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Funding

This work was supported by the National Natural Science Foundation of China for Youth (31901663), China Postdoctoral Science Foundation (2019M662829), the GDAS’ Project of Science and Technology Development (2020GDASYL-20200103021) and Guangzhou Science and Technology Program (202201010461).

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Qingping Wu and Qihui Gu conceived and designed the experiments; Qihui Gu and Ming Sun performed the experiments; Qihui Gu, Ju Ma, Youxiong Zhang and Weixian Hu analysed the data; Qingping Wu, Jumei Zhang, Yu Ding, Juan Wang, Weipeng Guo and Huiqing Wu contributed reagents/materials/analysis tools; Qihui Gu wrote the paper; Moutong Chen, Liang Xue and Qihui Gu reviewed the manuscript.

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Correspondence to Qingping Wu.

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Gu, Q., Ma, J., Zhang, J. et al. Nitrogen-metabolising microorganism analysis in rapid sand filters from drinking water treatment plant. Environ Sci Pollut Res 30, 29458–29475 (2023). https://doi.org/10.1007/s11356-022-23963-0

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