Abstract
Background
Nonalcoholic fatty liver disease (NAFLD) is a major risk factor for hepatocellular carcinoma, and alterations in miRNA expression are related to the development of NAFLD. However, the role of miRNAs in regulating the development of NAFLD is still poorly understood.
Methods
We used qRT-PCR to detect the level of miR-103-3p in both cell and mouse models of NAFLD. Biochemical assays, DCF-DA assays, Oil red O staining and HE staining were used to detect the role of miR-103-3p in NAFLD development. Target genes of miR-103-3p were predicted using the TargetScan database and verified by qRT-PCR, western blot and dual-luciferase assays.
Results
The expression of miR-103-3p increased in both NAFLD model cells and liver tissues from the NAFLD mouse model. Inhibition of miR-103-3p significantly alleviated the accumulation of lipid droplets in free fatty acid-treated L02 cells and liver tissues from mice with NAFLD. Inhibition of miR-103-3p reduced the contents of H2O2, TG, ALT, and AST and ROS production while increasing the ATP content. Moreover, the miR-103-3p antagomir alleviated liver tissue lesions in mice with NAFLD. Further studies identified ACOX1, a key enzyme for the oxidation and decomposition of fatty acids, as a direct target of miR-103-3p.
Conclusions
These findings identified a negative regulatory mechanism between ACOX1 and miR-103-3p that promotes the pathogenesis of NAFLD and suggested that inhibition of miR-103-3p may be a potential treatment strategy for NAFLD.
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Introduction
Nonalcoholic fatty liver disease (NAFLD) develops into progressive nonalcoholic steatohepatitis (NASH), liver fibrosis, and cirrhosis and eventually causes liver cancer, which results in an increasing global public health burden that affects both adults and children [1, 2]. Studies on the pathogenesis of NAFLD in recent decades have revealed that NAFLD is initiated by aberrant lipid metabolism in the liver [3]. Aberrant lipid metabolism of the liver is caused by mitochondrial dysfunction, endoplasmic reticulum stress (ERS), oxidative stress, and activation of inflammation [4]. In addition to the classic factors, epigenetic mechanisms such as noncoding RNA are involved in the progression of NAFLD [5, 6]. Therefore, studying the mechanism of noncoding RNA in NAFLD may provide a promising strategy for NAFLD.
Noncoding RNA refers to RNAs such as rRNA, tRNA, snRNA, snoRNA, lncRNA, circRNA and miRNA that do not encode protein [7]. To date, 28,645 miRNAs that regulate one-third of human genes have been found in animals, plants and viruses [8]. MicroRNA is a type of 21–23 nt single-stranded small RNA that targets the 3′UTR of mRNAs and silences or degrades mRNA, which regulates the progression of NAFLD [9, 10]. Patients with NAFLD displayed dramatic upregulation of miR-132 expression, and suppression of miR-132 expression decreased lipid accumulation to improve NAFLD in vivo [11]. Intriguingly, miR-26a was decreased in NAFLD patients’ livers, and overexpression of miR-26a inhibited high-fat diet (HFD)-induced oxidative stress, lipid accumulation, activation of inflammation and hepatic damage [12]. Anti-miR-214-3p increased ULK1-induced autophagic activity to mitigate hepatic steatosis [13].
MiR-103-3p is an important member of the miRNA family and is related to the regulation of pathological processes such as osteoporosis, diabetes, and obesity [14, 15]. Recent research has shown that miR-103-3p is a noninvasive prospective biomarker for NAFLD diagnosis [16]. The increase in miR-103-3p is related to liver steatosis, a type of NAFLD [17]. However, the regulatory mechanism of miR-103-3p in NAFLD has not yet been studied.
In this research, we used HFD-fed mice and FFA-treated L02 cells to research the possible regulatory effect of miR-103-3p on NAFLD. MiR-103-3p expression in hepatic and hepatocellular tissues increased. Moreover, suppression of miR-103-3p alleviated NAFLD damage both in vivo and in vitro by regulating hepatic lipid metabolism. Finally, we found that acyl-CoA oxidase 1 (ACOX1) was the target gene of miR-103-3p.
Materials and methods
Cell culture and cellular steatosis model construction
Human normal liver L02 cells were purchased from ATCC and cultured in RPMI 1640 medium (Gibco™, A4192301) with 10% FBS (Gibco™, 12483020) and 1% penicillin/streptomycin in 5% CO2 in a 37 °C humidified atmosphere. We used 1 mM FFA [FFA; oleate acid and palmitate acid (2:1)] to induce L02 cells to establish a NAFLD cell model. L02 cells were cultured in RPMI 1640 medium with FBS until the cells reached 60–80% confluence and then treated with 1 mM FFA for 48 hours (48 h).
MiRNA and small interfering RNA transfection
L02 cells were treated with FFA for 24 h, and then, Antagomir-103-3p (300 µM) transfection was performed, followed by incubation with FFA for 24 h. Antagomir-103-3p (5′-UCAUAGCCC UGUACAAUGCUGCU-3′, GenePharma) and Agomir-103-3p (5′-AGCCGCCUUGUACAGGGCUAUGA-3′ GenePharma) were transfected via Lipofectamine 2000 (Invitrogen, 11668027) according to the manufacturer’s protocol. Nonsense single-stranded RNA (5′-CAGUACUUUUGUGUAGUACAA-3′, GenePharma) was transfected into L02 cells as the negative control (NC) group.
Animals and treatment
Six-week-old male C57BL/6 mice (Changsheng Biotechnology) were fed for 1 week and then randomly divided into four groups: (1) the control group; (2) the HFD group; (3) the HFD + 15 mg/kg Antagomir-NC; and (4) the HFD + 15 mg/kg Antagomir-103-3p. All animal studies were approved by the Animal Care and Use Committee of Zhejiang University in accordance with the Chinese guidelines for the care and use of laboratory animals.
Western blot assay
A lysis buffer (Thermo Scientific™, PV5598) containing PMSF (Thermo Scientific™, 36978) was used to lyse L02 cells. Then, the BCA method (Thermo Scientific™, 5000006) was used to determine the protein concentration. After 40 µg of protein sample was mixed with 5× sample buffer, the proteins were separated by SDS-PAGE and transferred to PVDF membranes (Bio-Rad, 162-0177). After the membranes were blocked with 4% milk for 2 h, the following antibodies were added and incubated overnight at 4 °C: FASN antibody (1:500, Proteintech, 10624-2-AP), ACSL1 antibody (1:1000, Affinity, DF9605), ACOX1 antibody (1:1000, Affinity, DF12046), and GAPDH antibody (1:2500, Abcam, AB9485). After the membrane was washed 3 times with PBS, HRP secondary antibody was added and incubated for 2 h at room temperature. ECL (Bio-Rad, 170-5060) was added to the membrane, which was placed in the GelDoc imaging system (Bio-Rad). ImageJ software was used to perform optical density analysis.
Dual-luciferase reporter assay
According to the predicted miR-103-3p binding sites of ACOX1, wild-type ACOX1 (ACOX1-WT) and mutant-type ACOX1 (ACOX1-MT) were synthesized (GenePharma) and inserted into the luciferase reporter pGL3-control vector. Luciferase reporter plasmids ACOX1-WT or ACOX1-MT were transfected into 293T cells with Agomir-103-3p or Agomir-NC for 48 h. Then, the luciferase activity was measured by a Glomax 20/20 luminometer.
qRT-PCR assays
Total RNA was extracted by TRIzol reagent (Invitrogen™, A33251), and a TaqMan™ MicroRNA Reverse Transcription Kit (Applied Biosystems™, 4366596) or First Strand cDNA Synthesis Kit (Thermo Scientific™, K1632) was used to reverse transcribe complementary DNA (cDNA) for miRNAs or mRNA, respectively. qRT–PCR experiments of miR-103-3p, FASN, ACOX1, and ACSL1 were performed using the StepOnePlus Real-Time PCR system with Maxima SYBR Green qPCR Master Mixes. The relative expression of genes was calculated by the 2−△△Ct method. The qRT-PCR primer sequences were shown in Table 1.
Oil red O staining
Then, 10% paraformaldehyde was applied to fix the slides, and Oil red O staining solution (Sigma, SLBP5248V) was added to the slides for 15 min. After washing with 60% isopropanol, the slides were counterstained with haematoxylin and imaged by light microscopy.
Biochemical analysis and measurement of ROS
The triglyceride (TG), alanine aminotransferase (ALT), aspartate transaminase (AST), adenosine triphosphate (ATP) and hydrogen peroxide (H2O2) levels in vitro and in vivo were measured using a triglyceride reagent (Nanjing Jiancheng Bioengineering Institute (NJBI), A110-1), ALT Activity Assay (NJBI, C009-2), AST Activity Assay Kit (NJBI, C101-2), ATP test kit (NJBI, A095) and Hydrogen Peroxide Assay (NJBI, A064-1) according to the manufacturer’s instructions. Staining with DCF-DA was performed using a Total ROS Assay Kit (Invitrogen™, 88-5930-74), and ROS production in the cells and mouse liver tissues was analysed by a BD FACSCanto II cytometer (BD Biosciences).
Haematoxylin and eosin (HE) staining
Liver tissues were fixed with 4% paraformaldehyde, and 5-µm-thick tissue sections were stained with HE. After air-drying, the slides were mounted with neutral gum, and the morphological changes in the liver tissues were detected under a light microscope.
Statistical analysis
Data were analysed by SPSS 18.0 and are presented as the mean ± standard deviation (SD). The means between groups were evaluated using Student’s t test or one-way ANOVA. P values < 0.05 were considered significant.
Results
MiR-103-3p expression increased in NAFLD, and suppression of miR-103-3p improved the NAFLD cell phenotype
qRT-PCR assays showed that miR-103-3p expression was increased in the FFA-treated cells and liver tissues from mice with NAFLD (Fig. 1A). These results showed that miR-103-3p may regulate the development of NAFLD. To determine the role of miR-103-3p in the pathological process of NAFLD, we successfully constructed an Antagomir-103-3p that downregulated miR-103-3p expression in the FFA-treated L02 cells (Fig. 1B). Oil Red O staining assays showed that Antagomir-103-3p significantly alleviated the accumulation of lipid droplets in NAFLD group cells (Fig. 1C).
Suppression of miR-103-3p alleviated the damage to NAFLD group cells
Abnormal lipid metabolism results in hepatic steatosis in NAFLD [18]. The biochemical test results showed that compared with the Antagomir-NC-treated cells, the Antagomir-103-3p-treated NAFLD group cells had significantly decreased TG, ALT, and AST contents (Fig. 2A). Moreover, the suppression of miR-103-3p decreased the H2O2 content and ROS production (Fig. 2B). The ATP content was significantly increased in the Antagomir-103-3p-treated NAFLD group cells (Fig. 2C). In addition, qRT-PCR and western blot results showed that NAFLD model cells treated with Antagomir-103-3p displayed inhibition of fatty acid synthase (FASN) and long-chain acyl coenzyme A synthase 1 (ACSL1) mRNA levels and FASN and ACSL1 protein expression while promoting ACOX1 mRNA and protein expression (Fig. 2D). The above findings revealed that suppression of miR-103-3p significantly alleviates inflammation, abnormal lipid metabolism, oxidative stress and damage to cells in the NAFLD group.
Suppression of miR-103-3p alleviated the damage to mice with NAFLD
To research the correlation between miR-103-3p and NAFLD in vivo, we constructed a mouse model of NAFLD with an HFD for 8 weeks, and Antagomir-103-3p was used for tail vein injection to interfere with miR-103-3p expression. The qRT-PCR results showed that Antagomir-103-3p effectively downregulated miR-103-3p expression in liver tissue from the mice with NAFLD (Fig. 3A). Oil Red O staining revealed that the number of red-stained lipid droplets increased in the liver tissue of the mice with NAFLD. The number of red-stained lipid droplets in the liver tissue of the mice with NAFLD in the Antagomir-103-3p group was reduced. HE staining revealed that the liver tissues of the mice with NAFLD had increased steatosis hepatocytes, ballooning degenerated hepatocytes and visible focal necrosis, and Antagomir-103-3p alleviated liver tissue lesions in the mice with NAFLD (Fig. 3B). In summary, Antagomir-103-3p improves the pathological changes in fatty liver tissue, indicating that miR-103-3p is related to NAFLD development.
The biochemical test results showed that the serum TG, ALT, and AST contents of the Antagomir-103-3p-treated mice with NAFLD were significantly reduced. Moreover, Antagomir-103-3p inhibited ROS production and H2O2 in the liver tissues and serum of the mice with NAFLD. The ATP content was significantly increased in the liver tissues of the Antagomir-103-3p-treated mice with NAFLD (Fig. 3C). In addition, Antagomir-103-3p inhibited FASN and ACSL1 mRNA levels and FASN and ACSL1 expression in liver tissues from the mice with NAFLD while promoting ACOX1 mRNA levels and ACOX1 expression (Fig. 3D). The above results revealed that suppression of miR-103-3p significantly alleviates inflammation, abnormal lipid metabolism, oxidative stress and damage in the mice with NAFLD.
ACOX1 is the target gene of miR-103-3p
The TargetScan website was used to predict the potential target genes of miR-103-3p and find the binding sites between miR-103-3p and ACOX1 (Fig. 4A). Dual luciferase reporter assays showed that miR-103-3p targeted ACOX1 (Fig. 4B). Moreover, qRT-PCR showed that Agomir-103-3p downregulated ACOX1 mRNA expression, while Antagomir-103-3p upregulated ACOX1 mRNA expression (Fig. 4C). Western blots also showed that ACOX1 expression decreased in the Agomir-103-3p-treated cells, while ACOX1 expression increased in the Antagomir-103-3p-treated cells (Fig. 4D). The above results showed that miR-103-3p targeted ACOX1.
Discussion
NAFLD is characterized by abnormal lipid accumulation in hepatocytes in the absence of alcohol intake [19]. In particular, NAFLD can progress to advanced NASH, fibrosis and cirrhosis and even hepatic carcinoma, which is a threat to human health [20]. However, there is no effective drug for NAFLD therapy. MiRNAs as a noninvasive marker may show promise in the diagnosis of NAFLD by replacing liver biopsy and provide a new strategy for NAFLD [21, 22]. The expression of miR-103-3p is related to steatosis activity, fibrosis score, stages, and prognostic markers of NAFLD [16]. We found that miR-103-3p was increased in the FFA-treated hepatocytes and liver tissues of the mice with NAFLD and may be a prospective biomarker for NAFLD diagnosis.
Abnormal lipid accumulation in hepatocytes results in TG deposition, upregulation of the levels of H2O2, ALT and AST and decreases in ATP [23,24,25]. Excessive TG accumulation is a feature of NAFLD, leading to hepatic lipid droplets [26]. We found that suppression of miR-103-3p alleviates lipid droplet accumulation in NAFLD group cells and liver tissues of the mice with NAFLD, accompanied by an increase in TG content. ALT and AST were increased in the NAFLD group compared to the control group [27]. We found that suppression of miR-103-3p downregulated ALT and AST levels in NAFLD cell supernatant and mouse serum. Mitochondrial oxidative function has a key role in the development of NAFLD, and fatty acid oxidation, ATP synthesis and ROS production influence lipogenesis and gluconeogenesis [28]. Consistent with our finding, ATP was significantly increased by suppression of miR-103-3p. Moreover, suppression of miR-103-3p decreased ROS production in NAFLD group cells and liver tissues from the mice with NAFLD. However, the specific mechanism by which miR-103-3p regulates NAFLD damage requires further study.
MiRNAs target the 3′UTR of mRNAs and silence or degrade mRNA, which regulates the progression of NAFLD [29]. MiR-17 targets Pknox1 to reduce hepatocyte steatosis by inhibiting intracellular TG and lipid accumulation [30]. MiR-130b-5p targets IGFBP2 to upregulate SCD1, ACC1 and FAS expression, and suppression of miR-130b-5p prevented lipid accumulation in hepatocytes [31]. Overexpression of miR-183-5p inhibited Btg1 to upregulate lipogenic gene expression [32]. We found that miR-103-3p regulates the mRNA levels and protein expression of the key enzymes for fatty acid synthesis (FASN and ACSL1) and the oxidation and decomposition of fatty acids (ACOX1) to alleviate liver tissue lesions in NAFLD. Moreover, miR-103-3p targets ACOX1 to modulate the development of NAFLD. ACOX1 regulates lipid homeostasis, oxidative stress, and hepatic inflammation, and the suppression of ACOX1 regulated the accumulation of TG in NAFLD [33, 34]. The miR-31-5p-ACOX1 axis was shown to alter lipid metabolomes in oral squamous cell carcinoma [35]. MiR-103a-3p targets HMGB1 to alleviate LPS-induced inflammation [36]. Moreover, ACOX1 was verified to be the specific target of miR-103-3p by qRT-PCR, western blot and dual-luciferase assays. Our research showed that miR-103-3p may inhibit ALT and AST to improve inflammation, decrease ROS and H2O2 levels to improve oxidative stress, and increase ATP levels to alleviate NAFLD damage by targeting ACOX1.
Conclusions
In summary, we demonstrated the possible regulation of miR-103-3p in NAFLD. MiR-103-3p expression was increased in the FFA-treated cells and liver tissues from the mice with NAFLD. Suppression of miR-103-3p alleviates abnormal lipid metabolism, oxidative stress and NAFLD damage by targeting ACOX1. Our research may provide a prospective biomarker for NAFLD diagnosis and a new strategy for NAFLD.
Data availability
The data of the study are available from the corresponding author upon reasonable request.
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Acknowledgements
We sincerely thank the investigators and authors who have contributed to this field. This work was supported by Zhejiang Provincial Natural Science Foundation of China under Grant No. LQ18H070006 and Zhejiang Provincial Medical and Health Technology Project (Grant 2019RC069).
Funding
This work was supported by Zhejiang Provincial Natural Science Foundation of China under Grant No. LQ18H070006 and Zhejiang Provincial Medical and Health Technology Project (grant 2019RC069).
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JD, analysis and collection of the data, drafting the manuscript, suggestion of pathological meaning; CX and SL, collection of data and analysis of the staining results; PC and LY, analysis of the data, revising the manuscript; JZ and JJ, conception and design, analysis and explanation of the data, revising the manuscript. All the authors have read and approved the final manuscript.
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Ding, J., Xia, C., Cen, P. et al. MiR-103-3p promotes hepatic steatosis to aggravate nonalcoholic fatty liver disease by targeting of ACOX1. Mol Biol Rep 49, 7297–7305 (2022). https://doi.org/10.1007/s11033-022-07515-w
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DOI: https://doi.org/10.1007/s11033-022-07515-w