Abstract
Circular RNAs (circRNAs) play a major role in cancer development and chemotherapy resistance. This study aimed to characterize circRNA profiles associated with Cisplatin (diamminedichloroplatinum, DDP) resistance of non-small-cell lung carcinoma (NSCLC) cells. The half-maximal inhibitory concentration (IC50) of A549 and A549/DDP cells was determined using CCK-8 assay. Further, circRNA profiles and differentially expressed genes in A549 and A549/DDP cells were characterized by deep sequencing and cell proliferation was measured using MTS assay. Cell cycle progression was analyzed using flow cytometry. Apoptosis experiment was performed by TUNEL assay and flow cytometry. Cell migration and invasion were assessed using the Transwell system. Finally, signalling protein levels related to cell cycle progression and migration were measured by western blot. CCK-8 assay showed that A549/DDP cells obtained strong DDP resistance. Further deep sequencing results showed that 689 circRNAs and 87 circRNAs were significantly upregulated and downregulated in A549/DDP cells compared to A549 cells, respectively. Moreover, the circRNA hsa_circ_0096157 with the highest expression level in A549/DPP cells was further analyzed for its potential mechanism of DDP resistance in A549/DDP. With or without DDP treatment, hsa_circ_0096157 knockdown inhibited proliferation, migration, invasion and cell cycle progression but promoted apoptosis of A549/DDP cells. In addition, the western blot results also showed that hsa_circ_0096157 knockdown in A549/DDP cells increased P21 and E-cadherin but decreased CDK4, Cyclin D1, Bcl-2, N-cadherin, and Vimentin protein expression levels, indicating that cell cycle progression might be inhibited by increased P21 protein level to inhibit the expression of CDK4-cyclin D1 complex and decreased Bcl-2 protein level; and migration and invasion were suppressed by the increased E-cadherin and decreased N-cadherin and Vimentin expression levels. In contrast, hsa_circ_0096157 overexpression in A549 cells caused the opposite cellular and molecular alterations. DDP resistance in NSCLC cells was associated with significant circRNA profile alterations. Moreover, increased hsa_circ_0096157 expression contributed to DDP resistance in NSCLC cells by promoting cell proliferation, migration, invasion and cell cycle progression and inhibiting apoptosis.
Similar content being viewed by others
References
Chen W, Zheng R, Baade PD, Zhang S, Zeng H, Bray F, Jemal A, Yu XQ, He J (2016) Cancer statistics in China, 2015. CA Cancer J Clin 66(2):115–132. https://doi.org/10.3322/caac.21338
Siegel RL, Miller KD, Jemal A (2016) Cancer statistics, 2016. CA Cancer J Clin 66(1):7–30. https://doi.org/10.3322/caac.21332
Brandao GD, Brega EF, Spatz A (2012) The role of molecular pathology in non-small-cell lung carcinoma-now and in the future. Curr Oncol (Toronto, Ont) 19(Suppl 1):S24–32. https://doi.org/10.3747/co.19.1058
Gabrielson E (2006) Worldwide trends in lung cancer pathology. Respirology (Carlton, Vic) 11(5):533–538. https://doi.org/10.1111/j.1440-1843.2006.00909.x
Malinovsky G, Yarmoshenko I, Zhukovsky M (2018) Radon, smoking and HPV as lung cancer risk factors in ecological studies. Int J Radiat Biol 94(1):62–69. https://doi.org/10.1080/09553002.2018.1399225
Fujimoto J, Wistuba II (2014) Current concepts on the molecular pathology of non-small cell lung carcinoma. Semin Diagn Pathol 31(4):306–313. https://doi.org/10.1053/j.semdp.2014.06.008
Fadejeva I, Olschewski H, Hrzenjak A (2017) MicroRNAs as regulators of cisplatin-resistance in non-small cell lung carcinomas. Oncotarget 8(70):115754–115773. https://doi.org/10.18632/oncotarget.22975
MacDonagh L, Gray SG, Breen E, Cuffe S, Finn SP, O'Byrne KJ, Barr MP (2018) BBI608 inhibits cancer stemness and reverses cisplatin resistance in NSCLC. Cancer Lett 428:117–126. https://doi.org/10.1016/j.canlet.2018.04.008
Chen P, Li J, Chen YC, Qian H, Chen YJ, Su JY, Wu M, Lan T (2016) The functional status of DNA repair pathways determines the sensitization effect to cisplatin in non-small cell lung cancer cells. Cell Oncol (Dordrecht) 39(6):511–522. https://doi.org/10.1007/s13402-016-0291-7
Sarin N, Engel F, Kalayda GV, Mannewitz M, Cinatl J Jr, Rothweiler F, Michaelis M, Saafan H, Ritter CA, Jaehde U, Frötschl R (2017) Cisplatin resistance in non-small cell lung cancer cells is associated with an abrogation of cisplatin-induced G2/M cell cycle arrest. PLoS ONE 12(7):e0181081. https://doi.org/10.1371/journal.pone.0181081
Jiang Z, Yin J, Fu W, Mo Y, Pan Y, Dai L, Huang H, Li S, Zhao J (2014) MiRNA 17 family regulates cisplatin-resistant and metastasis by targeting TGFbetaR2 in NSCLC. PLoS ONE 9(4):e94639. https://doi.org/10.1371/journal.pone.0094639
Sun DM, Tang BF, Li ZX, Guo HB, Cheng JL, Song PP, Zhao X (2018) MiR-29c reduces the cisplatin resistance of non-small cell lung cancer cells by negatively regulating the PI3K/Akt pathway. Sci Rep 8(1):8007. https://doi.org/10.1038/s41598-018-26381-w
Jeck WR, Sharpless NE (2014) Detecting and characterizing circular RNAs. Nat Biotechnol 32(5):453–461. https://doi.org/10.1038/nbt.2890
Memczak S, Jens M, Elefsinioti A, Torti F, Krueger J, Rybak A, Maier L, Mackowiak SD, Gregersen LH, Munschauer M, Loewer A, Ziebold U, Landthaler M, Kocks C, le Noble F, Rajewsky N (2013) Circular RNAs are a large class of animal RNAs with regulatory potency. Nature 495(7441):333–338. https://doi.org/10.1038/nature11928
Hansen TB, Kjems J, Damgaard CK (2013) Circular RNA and miR-7 in cancer. Can Res 73(18):5609–5612. https://doi.org/10.1158/0008-5472.can-13-1568
Li Y, Zheng Q, Bao C, Li S, Guo W, Zhao J, Chen D, Gu J, He X, Huang S (2015) Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis. Cell Res 25(8):981–984. https://doi.org/10.1038/cr.2015.82
Jiang MM, Mai ZT, Wan SZ, Chi YM, Zhang X, Sun BH, Di QG (2018) Microarray profiles reveal that circular RNA hsa_circ_0007385 functions as an oncogene in non-small cell lung cancer tumorigenesis. J Cancer Res Clin Oncol 144(4):667–674. https://doi.org/10.1007/s00432-017-2576-2
Gao D, Zhang X, Liu B, Meng D, Fang K, Guo Z, Li L (2017) Screening circular RNA related to chemotherapeutic resistance in breast cancer. Epigenomics 9(9):1175–1188. https://doi.org/10.2217/epi-2017-0055
Huang X, Li Z, Zhang Q, Wang W, Li B, Wang L, Xu Z, Zeng A, Zhang X, Zhang X, He Z, Li Q, Sun G, Wang S, Li Q, Wang L, Zhang L, Xu H, Xu Z (2019) Circular RNA AKT3 upregulates PIK3R1 to enhance cisplatin resistance in gastric cancer via miR-198 suppression. Mol Cancer 18(1):71. https://doi.org/10.1186/s12943-019-0969-3
Kun-Peng Z, Xiao-Long M, Chun-Lin Z (2018) Overexpressed circPVT1, a potential new circular RNA biomarker, contributes to doxorubicin and cisplatin resistance of osteosarcoma cells by regulating ABCB1. Int J Biol Sci 14(3):321–330. https://doi.org/10.7150/ijbs.24360
Cui Y, Li G, Zhang X, Dai F, Zhang R (2018) Increased MALAT1 expression contributes to cisplatin resistance in non-small cell lung cancer. Oncol Lett 16(4):4821–4828. https://doi.org/10.3892/ol.2018.9293
Fang Z, Chen W, Yuan Z, Liu X, Jiang H (2018) LncRNA-MALAT1 contributes to the cisplatin-resistance of lung cancer by upregulating MRP1 and MDR1 via STAT3 activation. Biomed Pharmacother 101:536–542. https://doi.org/10.1016/j.biopha.2018.02.130
Liu C, Zhang C, Yang J, Geng X, Du H, Ji X, Zhao H (2017) Screening circular RNA expression patterns following focal cerebral ischemia in mice. Oncotarget 8(49):86535–86547. https://doi.org/10.18632/oncotarget.21238
Langmead B, Salzberg SL (2012) Fast gapped-read alignment with Bowtie 2. Nat Methods 9(4):357–359. https://doi.org/10.1038/nmeth.1923
Yan N, Xu H, Zhang J, Xu L, Zhang Y, Zhang L, Xu Y, Zhang F (2017) Circular RNA profile indicates circular RNA VRK1 is negatively related with breast cancer stem cells. Oncotarget 8(56):95704–95718. https://doi.org/10.18632/oncotarget.21183
Brennan EP, Morine MJ, Walsh DW, Roxburgh SA, Lindenmeyer MT, Brazil DP, Gaora P, Roche HM, Sadlier DM, Cohen CD, Godson C (1822) Martin F (2012) Next-generation sequencing identifies TGF-β1-associated gene expression profiles in renal epithelial cells reiterated in human diabetic nephropathy. Biochem Biophys Acta 4:589–599. https://doi.org/10.1016/j.bbadis.2012.01.008
Gao Y, Wang J, Zhao F (2015) CIRI: an efficient and unbiased algorithm for de novo circular RNA identification. Genome Biol 16(1):4. https://doi.org/10.1186/s13059-014-0571-3
Dong Z, Zhong Z, Yang L, Wang S, Gong Z (2014) MicroRNA-31 inhibits cisplatin-induced apoptosis in non-small cell lung cancer cells by regulating the drug transporter ABCB9. Cancer Lett 343(2):249–257. https://doi.org/10.1016/j.canlet.2013.09.034
Ma Y, Li X, Cheng S, Wei W, Li Y (2015) MicroRNA-106a confers cisplatin resistance in non-small cell lung cancer A549 cells by targeting adenosine triphosphatase-binding cassette A1. Mol Med Rep 11(1):625–632. https://doi.org/10.3892/mmr.2014.2688
Han D, Li J, Wang H, Su X, Hou J, Gu Y, Qian C, Lin Y, Liu X, Huang M, Li N, Zhou W, Yu Y, Cao X (2017) Circular RNA circMTO1 acts as the sponge of microRNA-9 to suppress hepatocellular carcinoma progression. Hepatology (Baltimore, MD) 66(4):1151–1164. https://doi.org/10.1002/hep.29270
Zhang XQ, Yang JH (2018) Discovering circRNA-microRNA Interactions from CLIP-Seq Data. Methods Mol Biol (Clifton, NJ) 1724:193–207. https://doi.org/10.1007/978-1-4939-7562-4_16
Saleembhasha A, Mishra S (2018) Novel molecules lncRNAs, tRFs and circRNAs deciphered from next-generation sequencing/RNA sequencing: computational databases and tools. Briefings Funct Genomics 17(1):15–25. https://doi.org/10.1093/bfgp/elx013
Ye LY, Hu S, Xu HE, Xu RR, Kong H, Zeng XN, Xie WP, Wang H (2017) The effect of tetrandrine combined with cisplatin on proliferation and apoptosis of A549/DDP cells and A549 cells. Cancer Cell Int 17:40. https://doi.org/10.1186/s12935-017-0410-1
Zhu X, Li D, Yu F, Jia C, Xie J, Ma Y, Fan S, Cai H, Luo Q, Lv Z, Fan L (2016) miR-194 inhibits the proliferation, invasion, migration, and enhances the chemosensitivity of non-small cell lung cancer cells by targeting forkhead box A1 protein. Oncotarget 7(11):13139–13152. https://doi.org/10.18632/oncotarget.7545
Cetintas VB, Kucukaslan AS, Kosova B, Tetik A, Selvi N, Cok G, Gunduz C, Eroglu Z (2012) Cisplatin resistance induced by decreased apoptotic activity in non-small-cell lung cancer cell lines. Cell Biol Int 36(3):261–265. https://doi.org/10.1042/cbi20110329
Nascimento AV, Singh A, Bousbaa H, Ferreira D, Sarmento B, Amiji MM (2017) Overcoming cisplatin resistance in non-small cell lung cancer with Mad2 silencing siRNA delivered systemically using EGFR-targeted chitosan nanoparticles. Acta Biomater 47:71–80. https://doi.org/10.1016/j.actbio.2016.09.045
Zhang Y, Wang X, Han L, Zhou Y, Sun S (2015) Green tea polyphenol EGCG reverse cisplatin resistance of A549/DDP cell line through candidate genes demethylation. Biomed Pharmacother 69:285–290. https://doi.org/10.1016/j.biopha.2014.12.016
Tanaka T, Iino M (2014) Knockdown of Sec8 promotes cell-cycle arrest at G1/S phase by inducing p21 via control of FOXO proteins. FEBS J 281(4):1068–1084. https://doi.org/10.1111/febs.12669
Shirali S, Aghaei M, Shabani M, Fathi M, Sohrabi M, Moeinifard M (2013) Adenosine induces cell cycle arrest and apoptosis via cyclinD1/Cdk4 and Bcl-2/Bax pathways in human ovarian cancer cell line OVCAR-3. Tumour Biol 34(2):1085–1095. https://doi.org/10.1007/s13277-013-0650-1
Liao S, Yu C, Liu H, Zhang C, Li Y, Zhong X (2019) Long non-coding RNA H19 promotes the proliferation and invasion of lung cancer cells and regulates the expression of E-cadherin, N-cadherin, and vimentin. Oncotargets Ther 12:4099–4107. https://doi.org/10.2147/ott.s185156
Funding
This work was supported by the National Natural Science Foundation of China (Nos. 81760419 and 81760743) and Beijing Medical and Health Public Welfare Fund Medical Science Research Fund (No. B20151DS).
Author information
Authors and Affiliations
Contributions
This study concept and design, and the manuscript revision were performed by JL and JK. The experiments performance, data analysis and the manuscript draft were performed by HL and XX. The study design, study implementation and manuscript revision were performed by KW, QC, SC and DL. All authors read and approved the final manuscript.
Corresponding authors
Ethics declarations
Conflict of interest
All authors declare that they have no conflict of interest.
Research involving human participants and/or animals
This article does not contain any studies with human participants or animals performed by any of the authors.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Electronic supplementary material
Below is the link to the electronic supplementary material.
11010_2020_3860_MOESM1_ESM.tif
Supplemental Figure 1. The interaction network between differentially expressed circRNAs and the cell cycle and apoptosis processes. The network representing the interaction between differentially expressed circRNAs in A549/DDP cells and key components of the cell cycle progression and apoptosis processes were established using the Cytoscape software (TIF 7006 kb)
11010_2020_3860_MOESM2_ESM.xls
Supplemental Table 1. Detailed information of circRNAs identified in A549 and A549/DDP cells by next-generation RNA sequencing. (XLS 73 kb)
11010_2020_3860_MOESM3_ESM.xls
Supplemental Table 2. Differentially expressed genes between A549 and A549/DDP cells. Totally 859 genes were significantly up-regulated and 1038 genes were down-regulated in A549/DDP cells in comparison with the A549 cells. Differentially expressed genes were defined by an FDR <= 0.001 and log2Ratio >= 1. (XLS 195 kb)
Rights and permissions
About this article
Cite this article
Lu, H., Xie, X., Wang, K. et al. Circular RNA hsa_circ_0096157 contributes to cisplatin resistance by proliferation, cell cycle progression, and suppressing apoptosis of non-small-cell lung carcinoma cells. Mol Cell Biochem 475, 63–77 (2020). https://doi.org/10.1007/s11010-020-03860-1
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11010-020-03860-1