Abstract
Parkinson’s disease (PD), as one of the complex neurodegenerative disorders, affects millions of aged people. Although the precise pathogenesis remains mostly unknown, a significant number of studies have demonstrated that mitochondrial dysfunction acts as a major role in the pathogeny of PD. Both nuclear and mitochondrial DNA mutations can damage mitochondrial integrity. Especially, mutations in several genes that PD-linked have a closed association with mitochondrial dysfunction (e.g., Parkin, PINK1, DJ-1, alpha-synuclein, and LRRK2). Parkin, whose mutation causes autosomal-recessive juvenile parkinsonism, plays an essential role in mitochondrial quality control of mitochondrial biogenesis, mitochondrial dynamics, and mitophagy. Therefore, we summarized the advanced studies of Parkin’s role in mitochondrial quality control and hoped it could be studied further as a therapeutic target for PD.
Similar content being viewed by others
Abbreviations
- AMPK:
-
AMP-activated kinase
- ATP:
-
Adenosine triphosphate
- CCCP:
-
Carbonyl cyanide m-chlorophenylhydrazone
- DA:
-
Dopaminergic
- DUBs:
-
Deubiquitinating enzymes
- Drp1:
-
Dynamin-related protein 1
- ER:
-
Endoplasmic reticulum
- Fis1:
-
Fission 1
- MDV:
-
Mitochondrial-derived vesicle
- Mfn1:
-
Mitofusin1
- Mfn2:
-
Mitofusin2
- MID49 and MID51:
-
Mitochondrial dynamics of 49 and 51 kDa protein
- mtDNA:
-
Mitochondrial DNA
- OPA1:
-
Optic atrophy 1
- P-Ser65-Ub:
-
Phosphorylated S65 of Ub
- PD:
-
Parkinson’s disease
- ROS:
-
Reactive oxygen species
- SN:
-
Substantia nigra
- Ub:
-
Ubiquitin
- Ubl:
-
Ub-like
References
Aboud AA, Tidball AM, Kumar KK, Neely MD, Han B, Ess KC, Hong CC, Erikson KM, Hedera P, Bowman AB (2015) PARK2 patient neuroprogenitors show increased mitochondrial sensitivity to copper. Neurobiol Dis 73:204–212. https://doi.org/10.1016/j.nbd.2014.10.002
Akbar M, Essa MM, Daradkeh G, Abdelmegeed MA, Choi Y, Mahmood L, Song BJ (2016) Mitochondrial dysfunction and cell death in neurodegenerative diseases through nitroxidative stress. Brain Res 1637:34–55. https://doi.org/10.1016/j.brainres.2016.02.016
Ashrafi G, Schwarz TL (2013) The pathways of mitophagy for quality control and clearance of mitochondria. Cell Death Differ 20(1):31–42. https://doi.org/10.1038/cdd.2012.81
Austin S, St-Pierre J (2012) PGC1α and mitochondrial metabolism–emerging concepts and relevance in ageing and neurodegenerative disorders. J Cell Sci 125(Pt 21):4963–4971. https://doi.org/10.1242/jcs.113662
Bartek J, Hodny Z (2014) PARK2 orchestrates cyclins to avoid cancer. Nat Genet 46(6):527–528. https://doi.org/10.1038/ng.2992
Berthet A, Margolis EB, Zhang J, Hsieh I, Zhang J, Hnasko TS, Ahmad J, Edwards RH, Sesaki H, Huang EJ, Nakamura K (2014) Loss of mitochondrial fission depletes axonal mitochondria in midbrain dopamine neurons. J Neurosci 34(43):14304–14317. https://doi.org/10.1523/jneurosci.0930-14.2014
Bingol B, Tea JS, Phu L, Reichelt M, Bakalarski CE, Song Q, Foreman O, Kirkpatrick DS, Sheng M (2014) The mitochondrial deubiquitinase USP30 opposes parkin-mediated mitophagy. Nature 510(7505):370–375. https://doi.org/10.1038/nature13418
Birsa N, Norkett R, Wauer T, Mevissen TE, Wu HC, Foltynie T, Bhatia K, Hirst WD, Komander D, Plun-Favreau H, Kittler JT (2014) Lysine 27 ubiquitination of the mitochondrial transport protein Miro is dependent on serine 65 of the Parkin ubiquitin ligase. J Biol Chem 289(21):14569–14582. https://doi.org/10.1074/jbc.M114.563031
Bose A, Beal MF (2016) Mitochondrial dysfunction in Parkinson's disease. J Neurochem 139(1):216–231. https://doi.org/10.1111/jnc.13731
Bouman L, Schlierf A, Lutz AK, Shan J, Deinlein A, Kast J, Galehdar Z, Palmisano V, Patenge N, Berg D, Gasser T, Augustin R, Trümbach D, Irrcher I, Park DS, Wurst W, Kilberg MS, Tatzelt J, Winklhofer KF (2011) Parkin is transcriptionally regulated by ATF4: evidence for an interconnection between mitochondrial stress and ER stress. Cell Death Differ 18(5):769–782. https://doi.org/10.1038/cdd.2010.142
Buhlman L, Damiano M, Bertolin G, Ferrando-Miguel R, Lombès A, Brice A , Corti O (2014) Functional interplay between Parkin and Drp1 in mitochondrial fission and clearance. Biochim Biophys Acta 1843(9):2012–2026. https://doi.org/10.1016/j.bbamcr.2014.05.012
Canto C, Gerhart-Hines Z, Feige JN, Lagouge M, Noriega L, Milne JC, Elliott PJ, Puigserver P, Auwerx J (2009) AMPK regulates energy expenditure by modulating NAD+ metabolism and SIRT1 activity. Nature 458(7241):1056–1060. https://doi.org/10.1038/nature07813
Cartelli D, Amadeo A, Calogero AM, Casagrande FVM, De Gregorio C, Gioria M, Kuzumaki N, Costa I, Sassone J, Ciammola A, Hattori N, Okano H, Goldwurm S, Roybon L, Pezzoli G, Cappelletti G (2018) Parkin absence accelerates microtubule aging in dopaminergic neurons. Neurobiol Aging 61:66–74. https://doi.org/10.1016/j.neurobiolaging.2017.09.010
Celardo I, Costa AC, Lehmann S, Jones C, Wood N, Mencacci NE, Mallucci GR, Loh SH, Martins LM (2016) Mitofusin-mediated ER stress triggers neurodegeneration in pink1/parkin models of Parkinson's disease. Cell Death Dis 7(6):e2271. https://doi.org/10.1038/cddis.2016.173
Chan NC, Salazar AM, Pham AH, Sweredoski MJ, Kolawa NJ, Graham RL, Hess S, Chan DC (2011) Broad activation of the ubiquitin-proteasome system by Parkin is critical for mitophagy. Hum Mol Genet 20(9):1726–1737. https://doi.org/10.1093/hmg/ddr048
Chang C, Wu G, Gao P, Yang L, Liu W, Zuo J (2014) Upregulated Parkin expression protects mitochondrial homeostasis in DJ-1 konckdown cells and cells overexpressing the DJ-1 L166P mutation. Mol Cell Biochem 387(1–2):187–195. https://doi.org/10.1007/s11010-013-1884-3
Chen H, Chan DC (2009) Mitochondrial dynamics-fusion, fission, movement, and mitophagy-in neurodegenerative diseases. Hum Mol Genet 18(R2):R169–176. https://doi.org/10.1093/hmg/ddp326
Chen L, Xie Z, Turkson S, Zhuang X (2015) A53T human α-synuclein overexpression in transgenic mice induces pervasive mitochondria macroautophagy defects preceding dopamine neuron degeneration. J Neurosci 35(3):890–905. https://doi.org/10.1523/jneurosci.0089-14.2015
Chen Y, Dorn GW (2013) PINK1-phosphorylated mitofusin 2 is a Parkin receptor for culling damaged mitochondria. Science 340(6131):471–475. https://doi.org/10.1126/science.1231031
Chiang C, Pauli EK, Biryukov J, Feister KF, Meng M, White EA, Munger K, Howley PM, Meyers C, Gack MU (2018) The human papillomavirus E6 oncoprotein targets USP15 and TRIM25 to suppress RIG-I-mediated innate immune signaling. J Virol 92(6):e01737–e1747. https://doi.org/10.1128/jvi.01737-17
Chinta SJ, Mallajosyula JK, Rane A, Andersen JK (2010) Mitochondrial α-synuclein accumulation impairs complex I function in dopaminergic neurons and results in increased mitophagy in vivo. Neurosci Lett 486(3):235–239. https://doi.org/10.1016/j.neulet.2010.09.061
Cho DH, Nakamura T, Fang J, Cieplak P, Godzik A, Gu Z, Lipton SA (2009) S-nitrosylation of Drp1 mediates beta-amyloid-related mitochondrial fission and neuronal injury. Science 324(5923):102–105. https://doi.org/10.1126/science.1171091
Choubey V, Safiulina D, Vaarmann A, Cagalinec M, Wareski P, Kuum M, Zharkovsky A, Kaasik A (2011) Mutant A53T alpha-synuclein induces neuronal death by increasing mitochondrial autophagy. J Biol Chem 286(12):10814–10824. https://doi.org/10.1074/jbc.M110.132514
Chu CT (2010) A pivotal role for PINK1 and autophagy in mitochondrial quality control: implications for Parkinson disease. Hum Mol Genet 19(R1):R28–37. https://doi.org/10.1093/hmg/ddq143
Clark IE, Dodson MW, Jiang C, Cao JH, Huh JR, Seol JH, Yoo SJ, Hay BA, Guo M (2006) Drosophila pink1 is required for mitochondrial function and interacts genetically with parkin. Nature 441(7097):1162–1166. https://doi.org/10.1038/nature04779
Cornelissen T, Haddad D, Wauters F, Van Humbeeck C, Mandemakers W, Koentjoro B, Sue C, Gevaert K, De Strooper B, Verstreken P, Vandenberghe W (2014) The deubiquitinase USP15 antagonizes Parkin-mediated mitochondrial ubiquitination and mitophagy. Hum Mol Genet 23(19):5227–5242. https://doi.org/10.1093/hmg/ddu244
Costes S, Gurlo T, Rivera JF, Butler PC (2014) UCHL1 deficiency exacerbates human islet amyloid polypeptide toxicity in β-cells: evidence of interplay between the ubiquitin/proteasome system and autophagy. Autophagy 10(6):1004–1014. https://doi.org/10.4161/auto.28478
Cunningham CN, Baughman JM, Phu L, Tea JS, Yu C, Coons M, Kirkpatrick DS, Bingol B, Corn JE (2015) USP30 and parkin homeostatically regulate atypical ubiquitin chains on mitochondria. Nat Cell Biol 17(2):160–169. https://doi.org/10.1038/ncb3097
Damiano M, Gautier CA, Bulteau AL, Ferrando-Miguel R, Gouarne C, Paoli MG, Pruss R, Auchere F, L'Hermitte-Stead C, Bouillaud F, Brice A, Corti O, Lombes A (2014) Tissue- and cell-specific mitochondrial defect in Parkin-deficient mice. PLoS ONE. https://doi.org/10.1371/journal.pone.0099898
Dawson TM, Dawson VL (2014) Parkin plays a role in sporadic Parkinson's disease. Neurodegener Dis 13(2–3):69–71. https://doi.org/10.1159/000354307
de Lau LM, Breteler MM (2006) Epidemiology of Parkinson’s disease. Lancet Neurol 5(6):525–535. https://doi.org/10.1016/s1474-4422(06)70471-9
Deng H, Dodson MW, Huang H, Guo M (2008) The Parkinson's disease genes pink1 and parkin promote mitochondrial fission and/or inhibit fusion in Drosophila. Proc Natl Acad Sci USA 105(38):14503–14508. https://doi.org/10.1073/pnas.0803998105
Deng Z, Purtell K, Lachance V, Wold MS, Chen S, Yue Z (2017) Autophagy receptors and neurodegenerative diseases. Trends Cell Biol 27(7):491–504. https://doi.org/10.1016/j.tcb.2017.01.001
Durcan TM, Fon EA (2015) USP8 and PARK2/parkin-mediated mitophagy. Autophagy 11(2):428–429. https://doi.org/10.1080/15548627.2015.1009794
Durcan TM, Tang MY, Perusse JR, Dashti EA, Aguileta MA, McLelland GL, Gros P, Shaler TA, Faubert D, Coulombe B, Fon EA (2014) USP8 regulates mitophagy by removing K6-linked ubiquitin conjugates from parkin. EMBO J 33(21):2473–2491. https://doi.org/10.15252/embj.201489729
Egan DF, Shackelford DB, Mihaylova MM, Gelino S, Kohnz RA, Mair W, Vasquez DS, Joshi A, Gwinn DM, Taylor R, Asara JM, Fitzpatrick J, Dillin A, Viollet B, Kundu M, Hansen M, Shaw RJ (2011) Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy. Science 331(6016):456–461. https://doi.org/10.1126/science.1196371
Elfawy HA, Das B (2019) Crosstalk between mitochondrial dysfunction, oxidative stress, and age related neurodegenerative disease: etiologies and therapeutic strategies. Life Sci 218:165–184. https://doi.org/10.1016/j.lfs.2018.12.029
Feng ST, Wang ZZ, Yuan YH, Sun HM, Chen NH, Zhang Y (2020a) Update on the association of alpha-synuclein and tau with mitochondrial dysfunction: implications for Parkinson's disease. Eur J Neurosci. https://doi.org/10.1111/ejn.14699
Feng ST, Wang ZZ, Yuan YH, Wang XL, Sun HM, Chen NH, Zhang Y (2020b) Dynamin-related protein 1: A protein critical for mitochondrial fission, mitophagy, and neuronal death in Parkinson's disease. Pharmacol Res. https://doi.org/10.1016/j.phrs.2019.104553
Filadi R, Greotti E, Turacchio G, Luini A, Pozzan T, Pizzo P (2015) Mitofusin 2 ablation increases endoplasmic reticulum-mitochondria coupling. Proc Natl Acad Sci USA 112(17):E2174–2181. https://doi.org/10.1073/pnas.1504880112
Flønes IH, Fernandez-Vizarra E, Lykouri M, Brakedal B, Skeie GO, Miletic H, Lilleng PK, Alves G, Tysnes OB, Haugarvoll K, Dölle C, Zeviani M, Tzoulis C (2018) Neuronal complex I deficiency occurs throughout the Parkinson's disease brain, but is not associated with neurodegeneration or mitochondrial DNA damage. Acta Neuropathol 135(3):409–425. https://doi.org/10.1007/s00401-017-1794-7
Fukushima T, Yoshihara H, Furuta H, Hakuno F, Iemura SI, Natsume T, Nakatsu Y, Kamata H, Asano T, Komada M, Takahashi SI (2017) USP15 attenuates IGF-I signaling by antagonizing Nedd4-induced IRS-2 ubiquitination. Biochem Biophys Res Commun 484(3):522–528. https://doi.org/10.1016/j.bbrc.2017.01.101
Garcia-Esparcia P, Koneti A, Rodriguez-Oroz MC, Gago B, Del Rio JA, Ferrer I (2018) Mitochondrial activity in the frontal cortex area 8 and angular gyrus in Parkinson's disease and Parkinson's disease with dementia. Brain Pathol 28(1):43–57. https://doi.org/10.1111/bpa.12474
Gautier CA, Erpapazoglou Z, Mouton-Liger F, Muriel MP, Cormier F, Bigou S, Duffaure S, Girard M, Foret B, Iannielli A, Broccoli V, Dalle C, Bohl D, Michel PP, Corvol JC, Brice A, Corti O (2016) The endoplasmic reticulum-mitochondria interface is perturbed in PARK2 knockout mice and patients with PARK2 mutations. Hum Mol Genet 25(14):2972–2984. https://doi.org/10.1093/hmg/ddw148
Gegg ME, Cooper JM, Chau KY, Rojo M, Schapira AH, Taanman JW (2010) Mitofusin 1 and mitofusin 2 are ubiquitinated in a PINK1/parkin-dependent manner upon induction of mitophagy. Hum Mol Genet 19(24):4861–4870. https://doi.org/10.1093/hmg/ddq419
Gehrke S, Wu Z, Klinkenberg M, Sun Y, Auburger G, Guo S, Lu B (2015) PINK1 and Parkin control localized translation of respiratory chain component mRNAs on mitochondria outer membrane. Cell Metab 21(1):95–108. https://doi.org/10.1016/j.cmet.2014.12.007
Giaime E, Yamaguchi H, Gautier CA, Kitada T, Shen J (2012) Loss of DJ-1 does not affect mitochondrial respiration but increases ROS production and mitochondrial permeability transition pore opening. PLoS ONE. https://doi.org/10.1371/journal.pone.0040501
Golpich M, Amini E, Mohamed Z, Azman Ali R, Mohamed Ibrahim N, Ahmadiani A (2017) Mitochondrial dysfunction and biogenesis in neurodegenerative diseases: pathogenesis and treatment. CNS Neurosci Ther 23(1):5–22. https://doi.org/10.1111/cns.12655
González-Casacuberta I, Juárez-Flores DL, Ezquerra M, Fucho R, Catalán-García M, Guitart-Mampel M, Tobías E, García-Ruiz C, Fernández-Checa JC, Tolosa E, Martí MJ, Grau JM, Fernández-Santiago R, Cardellach F, Morén C, Garrabou G (2019) Mitochondrial and autophagic alterations in skin fibroblasts from Parkinson disease patients with Parkin mutations. Aging (Albany NY) 11(11):3750–3767. https://doi.org/10.18632/aging.102014
Gouspillou G, Godin R, Piquereau J, Picard M, Mofarrahi M, Mathew J, Purves-Smith FM, Sgarioto N, Hepple RT, Burelle Y, Hussain SNA (2018) Protective role of Parkin in skeletal muscle contractile and mitochondrial function. J Physiol 596(13):2565–2579. https://doi.org/10.1113/jp275604
Greene AW, Grenier K, Aguileta MA, Muise S, Farazifard R, Haque ME, McBride HM, Park DS, Fon EA (2012) Mitochondrial processing peptidase regulates PINK1 processing, import and Parkin recruitment. EMBO Rep 13(4):378–385. https://doi.org/10.1038/embor.2012.14
Greene JC, Whitworth AJ, Kuo I, Andrews LA, Feany MB, Pallanck LJ (2003) Mitochondrial pathology and apoptotic muscle degeneration in Drosophila parkin mutants. Proc Natl Acad Sci U S A 100(7):4078–4083. https://doi.org/10.1073/pnas.0737556100
Grünewald A, Voges L, Rakovic A, Kasten M, Vandebona H, Hemmelmann C, Lohmann K, Orolicki S, Ramirez A, Schapira AH, Pramstaller PP, Sue CM, Klein C (2010) Mutant Parkin impairs mitochondrial function and morphology in human fibroblasts. PLoS ONE 5(9):e12962. https://doi.org/10.1371/journal.pone.0012962
Gui YX, Xu ZP, Lv W, Zhao JJ, Hu XY (2015) Evidence for polymerase gamma, POLG1 variation in reduced mitochondrial DNA copy number in Parkinson's disease. Parkinsonism Relat Disord 21(3):282–286. https://doi.org/10.1016/j.parkreldis.2014.12.030
Guida M, Zanon A, Montibeller L, Lavdas AA, Ladurner J, Pischedda F, Rakovic A, Domingues FS, Piccoli G, Klein C, Pramstaller PP, Hicks AA, Pichler I (2019) Parkin interacts with apoptosis-inducing factor and interferes with its translocation to the nucleus in neuronal cells. Int J Mol Sci 20(3):E748. https://doi.org/10.3390/ijms20030748
Han K, Hassanzadeh S, Singh K, Menazza S, Nguyen TT, Stevens MV, Nguyen A, San H, Anderson SA, Lin Y, Zou J, Murphy E, Sack MN (2017) Parkin regulation of CHOP modulates susceptibility to cardiac endoplasmic reticulum stress. Sci Rep 7(1):2093. https://doi.org/10.1038/s41598-017-02339-2
Hang L, Thundyil J, Lim KL (2015) Mitochondrial dysfunction and Parkinson disease: a Parkin-AMPK alliance in neuroprotection. Ann N Y Acad Sci 1350:37–47. https://doi.org/10.1111/nyas.12820
Hardy J, Cai H, Cookson MR, Gwinn-Hardy K, Singleton A (2006) Genetics of Parkinson’s disease and parkinsonism. Ann Neurol 60(4):389–398. https://doi.org/10.1002/ana.21022
Heo JM, Ordureau A, Paulo JA, Rinehart J, Harper JW (2015) The PINK1-PARKIN mitochondrial ubiquitylation pathway drives a program of OPTN/NDP52 recruitment and TBK1 activation to promote mitophagy. Mol Cell 60(1):7–20. https://doi.org/10.1016/j.molcel.2015.08.016
Hill BG, Bhatnagar A (2012) Protein S-glutathiolation: redox-sensitive regulation of protein function. J Mol Cell Cardiol 52(3):559–567. https://doi.org/10.1016/j.yjmcc.2011.07.009
Holper L, Ben-Shachar D, Mann JJ (2019) Multivariate meta-analyses of mitochondrial complex I and IV in major depressive disorder, bipolar disorder, schizophrenia, Alzheimer disease, and Parkinson disease. Neuropsychopharmacology 44(5):837–849. https://doi.org/10.1038/s41386-018-0090-0
Iqbal S, Hood DA (2014) Oxidative stress-induced mitochondrial fragmentation and movement in skeletal muscle myoblasts. Am J Physiol Cell Physiol 306(12):C1176–1183. https://doi.org/10.1152/ajpcell.00017.2014
Iyengar PV, Jaynes P, Rodon L, Lama D, Law KP, Lim YP, Verma C, Seoane J, Eichhorn PJ (2015) USP15 regulates SMURF2 kinetics through C-lobe mediated deubiquitination. Sci Rep 5:14733. https://doi.org/10.1038/srep14733
Jiang H, Ren Y, Zhao J, Feng J (2004) Parkin protects human dopaminergic neuroblastoma cells against dopamine-induced apoptosis. Hum Mol Genet 13(16):1745–1754. https://doi.org/10.1093/hmg/ddh180
Jin SM, Youle RJ (2013) The accumulation of misfolded proteins in the mitochondrial matrix is sensed by PINK1 to induce PARK2/Parkin-mediated mitophagy of polarized mitochondria. Autophagy 9(11):1750–1757. https://doi.org/10.4161/auto.26122
Joselin AP, Hewitt SJ, Callaghan SM, Kim RH, Chung YH, Mak TW, Shen J, Slack RS, Park DS (2012) ROS-dependent regulation of Parkin and DJ-1 localization during oxidative stress in neurons. Hum Mol Genet 21(22):4888–4903. https://doi.org/10.1093/hmg/dds325
Kaminskyy V, Zhivotovsky B (2012) Proteases in autophagy. Biochim Biophys Acta 1824(1):44–50. https://doi.org/10.1016/j.bbapap.2011.05.013
Katoh M, Wu B, Nguyen HB, Thai TQ, Yamasaki R, Lu H, Rietsch AM, Zorlu MM, Shinozaki Y, Saitoh Y, Saitoh S, Sakoh T, Ikenaka K, Koizumi S, Ransohoff RM, Ohno N (2017) Polymorphic regulation of mitochondrial fission and fusion modifies phenotypes of microglia in neuroinflammation. Sci Rep 7(1):4942. https://doi.org/10.1038/s41598-017-05232-0
Kazlauskaite A, Kondapalli C, Gourlay R, Campbell David G, Ritorto Maria S, Hofmann K, Alessi Dario R, Knebel A, Trost M, Muqit Miratul MK (2014) Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at Ser65. Biochem J 460(1):127–141. https://doi.org/10.1042/bj20140334
Keestra-Gounder AM, Byndloss MX, Seyffert N, Young BM, Chávez-Arroyo A, Tsai AY, Cevallos SA, Winter MG, Pham OH, Tiffany CR, de Jong MF, Kerrinnes T, Ravindran R, Luciw PA, McSorley SJ, Bäumler AJ, Tsolis RM (2016) NOD1 and NOD2 signalling links ER stress with inflammation. Nature 532(7599):394–397. https://doi.org/10.1038/nature17631
Kim YJ, Kim K, Lee YY, Choo OS, Jang JH, Choung YH (2019) Downregulated UCHL1 accelerates gentamicin-induced auditory cell death via autophagy. Mol Neurobiol 56(11):7433–7447. https://doi.org/10.1007/s12035-019-1598-y
Koyano F, Okatsu K, Kosako H, Tamura Y, Go E, Kimura M, Kimura Y, Tsuchiya H, Yoshihara H, Hirokawa T, Endo T, Fon EA, Trempe J-F, Saeki Y, Tanaka K, Matsuda N (2014) Ubiquitin is phosphorylated by PINK1 to activate parkin. Nature 510(7503):162–166. https://doi.org/10.1038/nature13392
Kumar A, Aguirre JD, Condos TE, Martinez-Torres RJ, Chaugule VK, Toth R, Sundaramoorthy R, Mercier P, Knebel A, Spratt DE, Barber KR, Shaw GS, Walden H (2015) Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis. EMBO J 34(20):2506–2521. https://doi.org/10.15252/embj.201592337
Kuroda Y, Mitsui T, Kunishige M, Shono M, Akaike M, Azuma H, Matsumoto T (2006) Parkin enhances mitochondrial biogenesis in proliferating cells. Hum Mol Genet 15(6):883–895. https://doi.org/10.1093/hmg/ddl006
Kwon KY, Viollet B, Yoo OJ (2011) CCCP induces autophagy in an AMPK-independent manner. Biochem Biophys Res Commun 416(3–4):343–348. https://doi.org/10.1016/j.bbrc.2011.11.038
Langston JW, Ballard P, Tetrud JW, Irwin I (1983) Chronic Parkinsonism in humans due to a product of meperidine-analog synthesis. Science 219(4587):979–980. https://doi.org/10.1126/science.6823561
Lazarou M, Jin SM, Kane LA, Youle RJ (2012) Role of PINK1 binding to the TOM complex and alternate intracellular membranes in recruitment and activation of the E3 ligase Parkin. Dev Cell 22(2):320–333. https://doi.org/10.1016/j.devcel.2011.12.014
Lazarou M, Sliter DA, Kane LA, Sarraf SA, Wang C, Burman JL, Sideris DP, Fogel AI, Youle RJ (2015) The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy. Nature 524(7565):309–314. https://doi.org/10.1038/nature14893
Leal NS, Schreiner B, Pinho CM, Filadi R, Wiehager B, Karlström H, Pizzo P, Ankarcrona M (2016) Mitofusin-2 knockdown increases ER-mitochondria contact and decreases amyloid β-peptide production. J Cell Mol Med 20(9):1686–1695. https://doi.org/10.1111/jcmm.12863
Lee H, Yoon Y (2016) Mitochondrial fission and fusion. Biochem Soc Trans 44(6):1725–1735. https://doi.org/10.1042/bst20160129
Lee Y, Stevens DA, Kang SU, Jiang H, Lee YI, Ko HS, Scarffe LA, Umanah GE, Kang H, Ham S, Kam TI, Allen K, Brahmachari S, Kim JW, Neifert S, Yun SP, Fiesel FC, Springer W, Dawson VL, Shin JH, Dawson TM (2017) PINK1 primes parkin-mediated ubiquitination of PARIS in dopaminergic neuronal survival. Cell Rep 18(4):918–932. https://doi.org/10.1016/j.celrep.2016.12.090
Li PA, Hou X, Hao S (2017) Mitochondrial biogenesis in neurodegeneration. J Neurosci Res 95(10):2025–2029. https://doi.org/10.1002/jnr.24042
Liesa M, Shirihai OS (2013) Mitochondrial dynamics in the regulation of nutrient utilization and energy expenditure. Cell Metab 17(4):491–506. https://doi.org/10.1016/j.cmet.2013.03.002
Lin MT, Beal MF (2006) Mitochondrial dysfunction and oxidative stress in neurodegenerative diseases. Nature 443(7113):787–795. https://doi.org/10.1038/nature05292
Liu J, Liu W, Li R, Yang H (2019) Mitophagy in Parkinson's disease: from pathogenesis to treatment. Cells. https://doi.org/10.3390/cells8070712
Lutz AK, Exner N, Fett ME, Schlehe JS, Kloos K, Lammermann K, Brunner B, Kurz-Drexler A, Vogel F, Reichert AS, Bouman L, Vogt-Weisenhorn D, Wurst W, Tatzelt J, Haass C, Winklhofer KF (2009) Loss of parkin or PINK1 function increases Drp1-dependent mitochondrial fragmentation. J Biol Chem 284(34):22938–22951. https://doi.org/10.1074/jbc.M109.035774
Manfredsson FP, Burger C, Sullivan LF, Muzyczka N, Lewin AS, Mandel RJ (2007) rAAV-mediated nigral human parkin over-expression partially ameliorates motor deficits via enhanced dopamine neurotransmission in a rat model of Parkinson's disease. Exp Neurol 207(2):289–301. https://doi.org/10.1016/j.expneurol.2007.06.019
McLelland GL, Fon EA (2018) MFN2 retrotranslocation boosts mitophagy by uncoupling mitochondria from the ER. Autophagy 14(9):1658–1660. https://doi.org/10.1080/15548627.2018.1505154
McLelland GL, Goiran T, Yi W, Dorval G, Chen CX, Lauinger ND, Krahn AI, Valimehr S, Rakovic A, Rouiller I, Durcan TM, Trempe JF, Fon EA (2018) Mfn2 ubiquitination by PINK1/parkin gates the p97-dependent release of ER from mitochondria to drive mitophagy. Elife. https://doi.org/10.7554/eLife.32866
McLelland GL, Soubannier V, Chen CX, McBride HM, Fon EA (2014) Parkin and PINK1 function in a vesicular trafficking pathway regulating mitochondrial quality control. EMBO J 33:282–295. https://doi.org/10.1002/embj.201385902
Melo TQ, Copray S, Ferrari MFR (2018) Alpha-synuclein toxicity on protein quality control, mitochondria and endoplasmic reticulum. Neurochem Res 43(12):2212–2223. https://doi.org/10.1007/s11064-018-2673-x
Menges S, Minakaki G, Schaefer PM, Meixner H, Prots I, Schlötzer-Schrehardt U, Friedland K, Winner B, Outeiro TF, Winklhofer KF, von Arnim CA, Xiang W, Winkler J, Klucken J (2017) Alpha-synuclein prevents the formation of spherical mitochondria and apoptosis under oxidative stress. Sci Rep 7:42942. https://doi.org/10.1038/srep42942
Miller S, Muqit MMK (2019) Therapeutic approaches to enhance PINK1/Parkin mediated mitophagy for the treatment of Parkinson's disease. Neurosci Lett 705:7–13. https://doi.org/10.1016/j.neulet.2019.04.029
Mitra K (2013) Mitochondrial fission-fusion as an emerging key regulator of cell proliferation and differentiation. BioEssays 35(11):955–964. https://doi.org/10.1002/bies.201300011
Miyake Y, Tanaka K, Fukushima W, Kiyohara C, Sasaki S, Tsuboi Y, Yamada T, Oeda T, Shimada H, Kawamura N, Sakae N, Fukuyama H, Hirota Y, Nagai M (2012) UCHL1 S18Y variant is a risk factor for Parkinson's disease in Japan. BMC Neurol 12:62. https://doi.org/10.1186/1471-2377-12-62
Morais VA, Haddad D, Craessaerts K, De Bock PJ, Swerts J, Vilain S, Aerts L, Overbergh L, Grunewald A, Seibler P, Klein C, Gevaert K, Verstreken P, De Strooper B (2014) PINK1 loss-of-function mutations affect mitochondrial complex I activity via NdufA10 ubiquinone uncoupling. Science 344(6180):203–207. https://doi.org/10.1126/science.1249161
Müftüoglu M, Elibol B, Dalmizrak O, Ercan A, Kulaksiz G, Ogüs H, Dalkara T, Ozer N (2004) Mitochondrial complex I and IV activities in leukocytes from patients with parkin mutations. Mov Disord 19(5):544–548. https://doi.org/10.1002/mds.10695
Müller-Rischart AK, Pilsl A, Beaudette P, Patra M, Hadian K, Funke M, Peis R, Deinlein A, Schweimer C, Kuhn PH, Lichtenthaler SF, Motori E, Hrelia S, Wurst W, Trümbach D, Langer T, Krappmann D, Dittmar G, Tatzelt J, Winklhofer KF (2013) The E3 ligase parkin maintains mitochondrial integrity by increasing linear ubiquitination of NEMO. Mol Cell 49(5):908–921. https://doi.org/10.1016/j.molcel.2013.01.036
Müller S, Dennemärker J, Reinheckel T (2012) specific functions of lysosomal proteases in endocytic and autophagic pathways. Biochim Biophys Acta 1824(1):34–43. https://doi.org/10.1016/j.bbapap.2011.07.003
Naon D, Zaninello M, Giacomello M, Varanita T, Grespi F, Lakshminaranayan S, Serafini A, Semenzato M, Herkenne S, Hernández-Alvarez MI, Zorzano A, De Stefani D, Dorn GW 2nd, Scorrano L (2016) Critical reappraisal confirms that Mitofusin 2 is an endoplasmic reticulum-mitochondria tether. Proc Natl Acad Sci USA 113(40):11249–11254. https://doi.org/10.1073/pnas.1606786113
Narendra D, Kane LA, Hauser DN, Fearnley IM, Youle RJ (2010) p62/SQSTM1 is required for Parkin-induced mitochondrial clustering but not mitophagy; VDAC1 is dispensable for both. Autophagy 6(8):1090–1106. https://doi.org/10.4161/auto.6.8.13426
Narendra D, Tanaka A, Suen DF, Youle RJ (2008) Parkin is recruited selectively to impaired mitochondria and promotes their autophagy. J Cell Biol 183(5):795–803. https://doi.org/10.1083/jcb.200809125
Nezich CL, Wang C, Fogel AI, Youle RJ (2015) MiT/TFE transcription factors are activated during mitophagy downstream of Parkin and Atg5. J Cell Biol 210(3):435–450. https://doi.org/10.1083/jcb.201501002
Okatsu K, Saisho K, Shimanuki M, Nakada K, Shitara H, Sou YS, Kimura M, Sato S, Hattori N, Komatsu M, Tanaka K, Matsuda N (2010) p62/SQSTM1 cooperates with Parkin for perinuclear clustering of depolarized mitochondria. Genes Cells 15(8):887–900. https://doi.org/10.1111/j.1365-2443.2010.01426.x
Ordureau A, Sarraf SA, Duda DM, Heo JM, Jedrychowski MP, Sviderskiy VO, Olszewski JL, Koerber JT, Xie T, Beausoleil SA, Wells JA, Gygi SP, Schulman BA, Harper JW (2014) Quantitative proteomics reveal a feedforward mechanism for mitochondrial PARKIN translocation and ubiquitin chain synthesis. Mol Cell 56(3):360–375. https://doi.org/10.1016/j.molcel.2014.09.007
Otera H, Miyata N, Kuge O, Mihara K (2016) Drp1-dependent mitochondrial fission via MiD49/51 is essential for apoptotic cristae remodeling. J Cell Biol 212(5):531–544. https://doi.org/10.1083/jcb.201508099
Pacelli C, De Rasmo D, Signorile A, Grattagliano I, di Tullio G, D'Orazio A, Nico B, Comi GP, Ronchi D, Ferranini E, Pirolo D, Seibel P, Schubert S, Gaballo A, Villani G,Cocco T (2011) Mitochondrial defect and PGC-1α dysfunction in parkin-associated familial Parkinson's disease. Biochim Biophys Acta 1812(8):1041–1053. https://doi.org/10.1016/j.bbadis.2010.12.022
Pacelli C, Rotundo G, Lecce L, Menga M, Bidollari E, Scrima R, Cela O, Piccoli C, Cocco T, Vescovi AL, Mazzoccoli G, Rosati J, Capitanio N (2019) Parkin mutation affects clock gene-dependent energy metabolism. Int J Mol Sci. https://doi.org/10.3390/ijms20112772
Padmanabhan S, Polinski NK, Menalled LB, Baptista MAS, Fiske BK (2019) The Michael J. Fox foundation for Parkinson's research strategy to advance therapeutic development of PINK1 and parkin. Biomolecules. https://doi.org/10.3390/biom9080296
Palacino JJ, Sagi D, Goldberg MS, Krauss S, Motz C, Wacker M, Klose J, Shen J (2004) Mitochondrial dysfunction and oxidative damage in parkin-deficient mice. J Biol Chem 279(18):18614–18622. https://doi.org/10.1074/jbc.M401135200
Palmer CS, Osellame LD, Laine D, Koutsopoulos OS, Frazier AE, Ryan MT (2011) MiD49 and MiD51, new components of the mitochondrial fission machinery. EMBO Rep 12(6):565–573. https://doi.org/10.1038/embor.2011.54
Park J, Lee G, Chung J (2009) The PINK1-Parkin pathway is involved in the regulation of mitochondrial remodeling process. Biochem Biophys Res Commun 378(3):518–523. https://doi.org/10.1016/j.bbrc.2008.11.086
Park J, Lee SB, Lee S, Kim Y, Song S, Kim S, Bae E, Kim J, Shong M, Kim JM, Chung J (2006) Mitochondrial dysfunction in Drosophila PINK1 mutants is complemented by parkin. Nature 441(7097):1157–1161. https://doi.org/10.1038/nature04788
Parrado-Fernandez C, Schneider B, Ankarcrona M, Conti MM, Cookson MR, Kivipelto M, Cedazo-Minguez A, Sandebring-Matton A (2018) Reduction of PINK1 or DJ-1 impair mitochondrial motility in neurites and alter ER-mitochondria contacts. J Cell Mol Med 22(11):5439–5449. https://doi.org/10.1111/jcmm.13815
Peker N, Donipadi V, Sharma M, McFarlane C, Kambadur R (2018) Loss of Parkin impairs mitochondrial function and leads to muscle atrophy. Am J Physiol Cell Physiol 315(2):C164–c185. https://doi.org/10.1152/ajpcell.00064.2017
Pesah Y, Pham T, Burgess H, Middlebrooks B, Verstreken P, Zhou Y, Harding M, Bellen H, Mardon G (2004) Drosophila parkin mutants have decreased mass and cell size and increased sensitivity to oxygen radical stress. Development 131(9):2183–2194. https://doi.org/10.1242/dev.01095
Pinto M, Nissanka N, Moraes CT (2018) Lack of parkin anticipates the phenotype and affects mitochondrial morphology and mtDNA levels in a mouse model of Parkinson's disease. J Neurosci 38(4):1042–1053. https://doi.org/10.1523/jneurosci.1384-17.2017
Ploumi C, Daskalaki I, Tavernarakis N (2017) Mitochondrial biogenesis and clearance: a balancing act. FEBS J 284(2):183–195. https://doi.org/10.1111/febs.13820
Polymeropoulos MH, Lavedan C, Leroy E, Ide SE, Dehejia A, Dutra A, Pike B, Root H, Rubenstein J, Boyer R, Stenroos ES, Chandrasekharappa S, Athanassiadou A, Papapetropoulos T, Johnson WG, Lazzarini AM, Duvoisin RC, Di Iorio G, Golbe LI, Nussbaum RL (1997) Mutation in the alpha-synuclein gene identified in families with Parkinson's disease. Science 276(5321):2045–2047. https://doi.org/10.1126/science.276.5321.2045
Poole AC, Thomas RE, Andrews LA, McBride HM, Whitworth AJ, Pallanck LJ (2008) The PINK1/Parkin pathway regulates mitochondrial morphology. Proc Natl Acad Sci USA 105(5):1638–1643. https://doi.org/10.1073/pnas.0709336105
Pyle A, Anugrha H, Kurzawa-Akanbi M, Yarnall A, Burn D, Hudson G (2016) Reduced mitochondrial DNA copy number is a biomarker of Parkinson's disease. Neurobiol Aging 38:216.e217–216.e210. https://doi.org/10.1016/j.neurobiolaging.2015.10.033
Rambold AS, Pearce EL (2018) Mitochondrial dynamics at the interface of immune cell metabolism and function. Trends Immunol 39(1):6–18. https://doi.org/10.1016/j.it.2017.08.006
Rasool S, Soya N, Truong L, Croteau N, Lukacs GL, Trempe JF (2018) PINK1 autophosphorylation is required for ubiquitin recognition. EMBO Rep 19(4):e44981. https://doi.org/10.15252/embr.201744981
Renault TT, Floros KV, Elkholi R, Corrigan KA, Kushnareva Y, Wieder SY, Lindtner C, Serasinghe MN, Asciolla JJ, Buettner C, Newmeyer DD, Chipuk JE (2015) Mitochondrial shape governs BAX-induced membrane permeabilization and apoptosis. Mol Cell 57(1):69–82. https://doi.org/10.1016/j.molcel.2014.10.028
Repnik U, Stoka V, Turk V, Turk B (2012) Lysosomes and lysosomal cathepsins in cell death. Biochim Biophys Acta 1824(1):22–33. https://doi.org/10.1016/j.bbapap.2011.08.016
Richter B, Sliter DA, Herhaus L, Stolz A, Wang C, Beli P, Zaffagnini G, Wild P, Martens S, Wagner SA, Youle RJ, Dikic I (2016) Phosphorylation of OPTN by TBK1 enhances its binding to Ub chains and promotes selective autophagy of damaged mitochondria. Proc Natl Acad Sci USA 113(15):4039–4044. https://doi.org/10.1073/pnas.1523926113
Riley BE, Lougheed JC, Callaway K, Velasquez M, Brecht E, Nguyen L, Shaler T, Walker D, Yang Y, Regnstrom K, Diep L, Zhang Z, Chiou S, Bova M, Artis DR, Yao N, Baker J, Yednock T, Johnston JA (2013) Structure and function of Parkin E3 ubiquitin ligase reveals aspects of RING and HECT ligases. Nat Commun 4:1982. https://doi.org/10.1038/ncomms2982
Roberts RF, Fon EA (2016) Presenting mitochondrial antigens: PINK1, parkin and MDVs steal the show. Cell Res 26(11):1180–1181. https://doi.org/10.1038/cr.2016.104
Rojansky R, Cha MY, Chan DC (2016) Elimination of paternal mitochondria in mouse embryos occurs through autophagic degradation dependent on PARKIN and MUL1. Elife. https://doi.org/10.7554/eLife.17896
Rothfuss O, Fischer H, Hasegawa T, Maisel M, Leitner P, Miesel F, Sharma M, Bornemann A, Berg D, Gasser T, Patenge N (2009) Parkin protects mitochondrial genome integrity and supports mitochondrial DNA repair. Hum Mol Genet 18(20):3832–3850. https://doi.org/10.1093/hmg/ddp327
Roy M, Itoh K, Iijima M, Sesaki H (2016) Parkin suppresses Drp1-independent mitochondrial division. Biochem Biophys Res Commun 475(3):283–288. https://doi.org/10.1016/j.bbrc.2016.05.038
Safiulina D, Kuum M, Choubey V, Gogichaishvili N, Liiv J, Hickey MA, Cagalinec M, Mandel M, Zeb A, Liiv M, Kaasik A (2019) Miro proteins prime mitochondria for Parkin translocation and mitophagy. EMBO J 38(2):e99384. https://doi.org/10.15252/embj.201899384
Sarraf SA, Sideris DP, Giagtzoglou N, Ni L, Kankel MW, Sen A, Bochicchio LE, Huang CH, Nussenzweig SC, Worley SH, Morton PD, Artavanis-Tsakonas S, Youle RJ, Pickrell AM (2019) PINK1/parkin influences cell cycle by sequestering TBK1 at damaged mitochondria. Inhib Mitosis Cell Rep 29(1):225–235.e225. https://doi.org/10.1016/j.celrep.2019.08.085
Sauve V, Lilov A, Seirafi M, Vranas M, Rasool S, Kozlov G, Sprules T, Wang J, Trempe JF, Gehring K (2015) A Ubl/ubiquitin switch in the activation of Parkin. EMBO J 34(20):2492–2505. https://doi.org/10.15252/embj.201592237
Schapira AHV, Chaudhuri KR, Jenner P (2017) Non-motor features of Parkinson disease. Nat Rev Neurosci 18(7):435–450. https://doi.org/10.1038/nrn.2017.62
Schneeberger M, Dietrich MO, Sebastián D, Imbernón M, Castaño C, Garcia A, Esteban Y, Gonzalez-Franquesa A, Rodríguez IC, Bortolozzi A, Garcia-Roves PM, Gomis R, Nogueiras R, Horvath TL, Zorzano A, Claret M (2013) Mitofusin 2 in POMC neurons connects ER stress with leptin resistance and energy imbalance. Cell 155(1):172–187. https://doi.org/10.1016/j.cell.2013.09.003
Seaman MN (2012) The retromer complex - endosomal protein recycling and beyond. J Cell Sci 125(Pt 20):4693–4702. https://doi.org/10.1242/jcs.103440
Seirafi M, Kozlov G, Gehring K (2015) Parkin structure and function. FEBS J 282(11):2076–2088. https://doi.org/10.1111/febs.13249
Sekine S, Youle RJ (2018) PINK1 import regulation; a fine system to convey mitochondrial stress to the cytosol. BMC Biol 16(1):2. https://doi.org/10.1186/s12915-017-0470-7
Seo BJ, Yoon SH, Do JT (2018) Mitochondrial dynamics in stem cells and differentiation. Int J Mol Sci 19(12):E3893. https://doi.org/10.3390/ijms19123893
Shaltouki A, Hsieh CH, Kim MJ, Wang X (2018) Alpha-synuclein delays mitophagy and targeting Miro rescues neuron loss in Parkinson's models. Acta Neuropathol 136(4):607–620. https://doi.org/10.1007/s00401-018-1873-4
Shaltouki A, Sivapatham R, Pei Y, Gerencser AA, Momčilović O, Rao MS, Zeng X (2015) Mitochondrial alterations by PARKIN in dopaminergic neurons using PARK2 patient-specific and PARK2 knockout isogenic iPSC lines. Stem Cell Rep 4(5):847–859. https://doi.org/10.1016/j.stemcr.2015.02.019
Shin JH, Ko HS, Kang H, Lee Y, Lee YI, Pletinkova O, Troconso JC, Dawson VL, Dawson TM (2011a) PARIS (ZNF746) repression of PGC-1alpha contributes to neurodegeneration in Parkinson's disease. Cell 144(5):689–702. https://doi.org/10.1016/j.cell.2011.02.010
Shin JH, Ko HS, Kang H, Lee Y, Lee YI, Pletinkova O, Troconso JC, Dawson VL, Dawson TM (2011b) PARIS (ZNF746) repression of PGC-1α contributes to neurodegeneration in Parkinson's disease. Cell 144(5):689–702. https://doi.org/10.1016/j.cell.2011.02.010
Shlevkov E, Kramer T, Schapansky J, LaVoie MJ, Schwarz TL (2016) Miro phosphorylation sites regulate Parkin recruitment and mitochondrial motility. Proc Natl Acad Sci USA 113(41):E6097–e6106. https://doi.org/10.1073/pnas.1612283113
Singh K, Han K, Tilve S, Wu K, Geller HM, Sack MN (2018) Parkin targets NOD2 to regulate astrocyte endoplasmic reticulum stress and inflammation. Glia 66(11):2427–2437. https://doi.org/10.1002/glia.23482
Sironi L, Restelli LM, Tolnay M, Neutzner A, Frank S (2020) Dysregulated interorganellar crosstalk of mitochondria in the pathogenesis of Parkinson's disease. Cells. https://doi.org/10.3390/cells9010233
Sliter DA, Martinez J, Hao L, Chen X, Sun N, Fischer TD, Burman JL, Li Y, Zhang Z, Narendra DP, Cai H, Borsche M, Klein C, Youle RJ (2018) Parkin and PINK1 mitigate STING-induced inflammation. Nature 561(7722):258–262. https://doi.org/10.1038/s41586-018-0448-9
Song L, McMackin M, Nguyen A, Cortopassi G (2017) Parkin deficiency accelerates consequences of mitochondrial DNA deletions and Parkinsonism. Neurobiol Dis 100:30–38. https://doi.org/10.1016/j.nbd.2016.12.024
Soubannier V, McLelland GL, Zunino R, Braschi E, Rippstein P, Fon EA, McBride HM (2012a) A vesicular transport pathway shuttles cargo from mitochondria to lysosomes. Curr Biol 22(2):135–141. https://doi.org/10.1016/j.cub.2011.11.057
Soubannier V, Rippstein P, Kaufman BA, Shoubridge EA, McBride HM (2012b) Reconstitution of mitochondria derived vesicle formation demonstrates selective enrichment of oxidized cargo. PLoS ONE 7(12):e52830. https://doi.org/10.1371/journal.pone.0052830
Spratt DE, Martinez-Torres RJ, Noh YJ, Mercier P, Manczyk N, Barber KR, Aguirre JD, Burchell L, Purkiss A, Walden H, Shaw GS (2013) A molecular explanation for the recessive nature of parkin-linked Parkinson's disease. Nat Commun 4:1983. https://doi.org/10.1038/ncomms2983
Stevens DA, Lee Y, Kang HC, Lee BD, Lee YI, Bower A, Jiang H, Kang SU, Andrabi SA, Dawson VL, Shin JH, Dawson TM (2015) Parkin loss leads to PARIS-dependent declines in mitochondrial mass and respiration. Proc Natl Acad Sci USA 112(37):11696–11701. https://doi.org/10.1073/pnas.1500624112
Subramaniam SR, Chesselet MF (2013) Mitochondrial dysfunction and oxidative stress in Parkinson's disease. Prog Neurobiol 106–107:17–32. https://doi.org/10.1016/j.pneurobio.2013.04.004
Sun Y, Vashisht AA, Tchieu J, Wohlschlegel JA, Dreier L (2012) Voltage-dependent anion channels (VDACs) recruit Parkin to defective mitochondria to promote mitochondrial autophagy. J Biol Chem 287(48):40652–40660. https://doi.org/10.1074/jbc.M112.419721
Tanik SA, Schultheiss CE, Volpicelli-Daley LA, Brunden KR, Lee VM (2013) Lewy body-like α-synuclein aggregates resist degradation and impair macroautophagy. J Biol Chem 288(21):15194–15210. https://doi.org/10.1074/jbc.M113.457408
Tipton KF, Singer TP (1993) Advances in our understanding of the mechanisms of the neurotoxicity of MPTP and related compounds. J Neurochem 61(4):1191–1206. https://doi.org/10.1111/j.1471-4159.1993.tb13610.x
Trempe JF, Chen CX, Grenier K, Camacho EM, Kozlov G, McPherson PS, Gehring K, Fon EA (2009) SH3 domains from a subset of BAR proteins define a Ubl-binding domain and implicate parkin in synaptic ubiquitination. Mol Cell 36(6):1034–1047. https://doi.org/10.1016/j.molcel.2009.11.021
Trempe JF, Sauve V, Grenier K, Seirafi M, Tang MY, Menade M, Al-Abdul-Wahid S, Krett J, Wong K, Kozlov G, Nagar B, Fon EA, Gehring K (2013) Structure of parkin reveals mechanisms for ubiquitin ligase activation. Science 340(6139):1451–1455. https://doi.org/10.1126/science.1237908
Trewin AJ, Berry BJ, Wojtovich AP (2018) Exercise and mitochondrial dynamics: keeping in shape with ROS and AMPK. Antioxidants (Basel). https://doi.org/10.3390/antiox7010007
Tsika E, Glauser L, Moser R, Fiser A, Daniel G, Sheerin UM, Lees A, Troncoso JC, Lewis PA, Bandopadhyay R, Schneider BL, Moore DJ (2014) Parkinson's disease-linked mutations in VPS35 induce dopaminergic neurodegeneration. Hum Mol Genet 23(17):4621–4638. https://doi.org/10.1093/hmg/ddu178
van der Merwe C, Loos B, Swart C, Kinnear C, Henning F, van der Merwe L, Pillay K, Muller N, Zaharie D, Engelbrecht L, Carr J, Bardien S (2014) Mitochondrial impairment observed in fibroblasts from South African Parkinson's disease patients with parkin mutations. Biochem Biophys Res Commun 447(2):334–340. https://doi.org/10.1016/j.bbrc.2014.03.151
Wang H, Song P, Du L, Tian W, Yue W, Liu M, Li D, Wang B, Zhu Y, Cao C, Zhou J, Chen Q (2011) Parkin ubiquitinates Drp1 for proteasome-dependent degradation: implication of dysregulated mitochondrial dynamics in Parkinson disease. J Biol Chem 286(13):11649–11658. https://doi.org/10.1074/jbc.M110.144238
Wang L, Cho YL, Tang Y, Wang J, Park JE, Wu Y, Wang C, Tong Y, Chawla R, Zhang J, Shi Y, Deng S, Lu G, Wu Y, Tan HW, Pawijit P, Lim GG, Chan HY, Zhang J, Fang L, Yu H, Liou YC, Karthik M, Bay BH, Lim KL, Sze SK, Yap CT, Shen HM (2018a) PTEN-L is a novel protein phosphatase for ubiquitin dephosphorylation to inhibit PINK1-Parkin-mediated mitophagy. Cell Res 28(8):787–802. https://doi.org/10.1038/s41422-018-0056-0
Wang L, Wang J, Tang Y, Shen HM (2018b) PTEN-L puts a brake on mitophagy. Autophagy 14(11):2023–2025. https://doi.org/10.1080/15548627.2018.1502565
Wang L, Wu Q, Fan Z, Xie R, Wang Z, Lu Y (2017) Platelet mitochondrial dysfunction and the correlation with human diseases. Biochem Soc Trans 45(6):1213–1223. https://doi.org/10.1042/bst20170291
Wang Y, Serricchio M, Jauregui M, Shanbhag R, Stoltz T, Di Paolo CT, Kim PK, McQuibban GA (2015) Deubiquitinating enzymes regulate PARK2-mediated mitophagy. Autophagy 11(4):595–606. https://doi.org/10.1080/15548627.2015.1034408
Wauer T, Komander D (2013) Structure of the human Parkin ligase domain in an autoinhibited state. EMBO J 32(15):2099–2112. https://doi.org/10.1038/emboj.2013.125
Wauer T, Swatek KN, Wagstaff JL, Gladkova C, Pruneda JN, Michel MA, Gersch M, Johnson CM, Freund SM, Komander D (2015) Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis. EMBO J 34(3):307–325. https://doi.org/10.15252/embj.201489847
Wild P, McEwan DG, Dikic I (2014) The LC3 interactome at a glance. J Cell Sci 127(Pt 1):3–9. https://doi.org/10.1242/jcs.140426
Williams ET, Glauser L, Tsika E, Jiang H, Islam S, Moore DJ (2018) Parkin mediates the ubiquitination of VPS35 and modulates retromer-dependent endosomal sorting. Hum Mol Genet 27(18):3189–3205. https://doi.org/10.1093/hmg/ddy224
Winslow AR, Chen CW, Corrochano S, Acevedo-Arozena A, Gordon DE, Peden AA, Lichtenberg M, Menzies FM, Ravikumar B, Imarisio S, Brown S, O'Kane CJ, Rubinsztein DC (2010) α-Synuclein impairs macroautophagy: implications for Parkinson's disease. J Cell Biol 190(6):1023–1037. https://doi.org/10.1083/jcb.201003122
Wong YC, Holzbaur EL (2014) Optineurin is an autophagy receptor for damaged mitochondria in parkin-mediated mitophagy that is disrupted by an ALS-linked mutation. Proc Natl Acad Sci USA 111(42):E4439–4448. https://doi.org/10.1073/pnas.1405752111
Wong YC, Krainc D (2017) α-synuclein toxicity in neurodegeneration: mechanism and therapeutic strategies. Nat Med 23(2):1–13. https://doi.org/10.1038/nm.4269
Wu Y, Chen M, Jiang J (2019) Mitochondrial dysfunction in neurodegenerative diseases and drug targets via apoptotic signaling. Mitochondrion 49:35–45. https://doi.org/10.1016/j.mito.2019.07.003
Xia W, Yin J, Zhang S, Guo C, Li Y, Zhang Y, Zhang A, Jia Z, Chen H (2018) Parkin modulates ERRα/eNOS signaling pathway in endothelial cells. Cell Physiol Biochem 49(5):2022–2034. https://doi.org/10.1159/000493713
Xiao B, Deng X, Lim GGY, Xie S, Zhou ZD, Lim KL, Tan EK (2017a) Superoxide drives progression of Parkin/PINK1-dependent mitophagy following translocation of Parkin to mitochondria. Cell Death Dis 8(10):e3097. https://doi.org/10.1038/cddis.2017.463
Xiao B, Goh JY, Xiao L, Xian H, Lim KL, Liou YC (2017b) Reactive oxygen species trigger Parkin/PINK1 pathway-dependent mitophagy by inducing mitochondrial recruitment of Parkin. J Biol Chem 292(40):16697–16708. https://doi.org/10.1074/jbc.M117.787739
Yamano K, Youle RJ (2013) PINK1 is degraded through the N-end rule pathway. Autophagy 9(11):1758–1769. https://doi.org/10.4161/auto.24633
Yan C, Huo H, Yang C, Zhang T, Chu Y, Liu Y (2018) Ubiquitin C-Terminal Hydrolase L1 regulates autophagy by inhibiting autophagosome formation through its deubiquitinating enzyme activity. Biochem Biophys Res Commun 497(2):726–733. https://doi.org/10.1016/j.bbrc.2018.02.140
Yang L, Long Q, Liu J, Tang H, Li Y, Bao F, Qin D, Pei D, Liu X (2015) Mitochondrial fusion provides an 'initial metabolic complementation' controlled by mtDNA. Cell Mol Life Sci 72(13):2585–2598. https://doi.org/10.1007/s00018-015-1863-9
Yang Y, Gehrke S, Imai Y, Huang Z, Ouyang Y, Wang JW, Yang L, Beal MF, Vogel H, Lu B (2006) Mitochondrial pathology and muscle and dopaminergic neuron degeneration caused by inactivation of Drosophila Pink1 is rescued by Parkin. Proc Natl Acad Sci USA 103(28):10793–10798. https://doi.org/10.1073/pnas.0602493103
Yu W, Sun Y, Guo S, Lu B (2011) The PINK1/Parkin pathway regulates mitochondrial dynamics and function in mammalian hippocampal and dopaminergic neurons. Hum Mol Genet 20(16):3227–3240. https://doi.org/10.1093/hmg/ddr235
Zhang Y, Wang ZZ, Sun HM (2012) Meta-analysis of the influence of Parkin p.Asp394Asn variant on the susceptibility of Parkinson's disease. Neurosci Lett 524(1):60–64. https://doi.org/10.1016/j.neulet.2012.07.007
Zhang Y, Wang ZZ, Sun HM (2013) A meta-analysis of the relationship of the Parkin p.Val380Leu polymorphism to Parkinson's disease. Am J Med Genet 162(3):235–244. https://doi.org/10.1002/ajmg.b.32138
Zhang Z, Liu L, Wu S, Xing D (2016) Drp1, Mff, Fis1, and MiD51 are coordinated to mediate mitochondrial fission during UV irradiation-induced apoptosis. FASEB J 30(1):466–476. https://doi.org/10.1096/fj.15-274258
Acknowledgements
We thank everyone who contributed to this manuscript.
Funding
This manuscript was supported by grants from the National Natural Science Foundation of China (No. 81473376), Scientific Research In-depth Development Fund of Beijing University of Chinese Medicine (No. 2019-ZXFZJJ-074), CAMS Innovation Fund for Medical Sciences (CIFMS) (No. 2016-I2M-1-004), and the Drug Innovation Major Project (Nos. 2018ZX09711001-003-005 and 2018ZX09711001-009-013).
Author information
Authors and Affiliations
Contributions
XLW and YZ designed the structure of the manuscript. XLW drafted the manuscript. YZ, ZZW, YHY, STF, and NHC made the critical revisions and improvements for the manuscript. XLW, ZZW, and YZ finalized the paper.
Corresponding author
Ethics declarations
Conflict of interest
The authors have no conflict of interest to declare.
Ethical Approval
This article does not contain any studies with human participants or animals performed by any of the authors.
Informed Consent
No informed consent is needed.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Wang, XL., Feng, ST., Wang, ZZ. et al. Parkin, an E3 Ubiquitin Ligase, Plays an Essential Role in Mitochondrial Quality Control in Parkinson’s Disease. Cell Mol Neurobiol 41, 1395–1411 (2021). https://doi.org/10.1007/s10571-020-00914-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10571-020-00914-2