Skip to main content
Log in

Differential expression of iron-sulfur cluster biosynthesis genes during peach flowering

  • Original Papers
  • Published:
Biologia Plantarum

Abstract

Iron is required for the Fe-S cluster assembly which occurs in chloroplasts, mitochondria, and cytosol and here we characterized 44 Fe-S cluster biosynthesis genes and investigated their expression profiles during different peach flowering stages. Quantitative real-time PCR analysis shows that the highest expression of most peach Fe-S cluster biosynthesis genes appeared in the full bloom stage. Also, the highest Fe accumulation occurred in the full bloom stage followed by beginning bloom, petal fall, and bud swell stages. Activities of nitrite reductase (NiR) and succinate dehydrogenase (SDH) were closely correlated to the flower Fe content, whereas the aconitase (ACO) activity kept steady during the whole flowering process. Moreover, shading treatment significantly reduced Fe accumulation and NiR, SDH, and ACO activities of the full blooming flowers. Seventeen Fe-S cluster biosynthesis genes were down-regulated in response to a shading treatment. In particular, plastid sulfur mobilization genes were sensitive to the shading treatment.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

ACO:

aconitase

CIA:

cytosolic iron-sulfur cluster assembly

FS:

flowering stage

ICP-AES:

inductively coupled plasma atomatic emission spectrometry

ISC:

iron-sulfur cluster

NiR:

nitrite reductase

RT-qPCR:

real-time quantitative PCR

SDH:

succinate dehydrogenase

SUF:

sulfur mobilization

References

  • Balk, J., Lobreaux, S.: Biogenesis of iron-sulfur proteins in plants. — Trends Plant Sci. 10: 324–331, 2005.

    Article  CAS  PubMed  Google Scholar 

  • Balk, J., Pilon, M.: Ancient and essential: the assembly of ironsulfur clusters in plants. — Trends Plant Sci. 16: 218–226, 2011.

    Article  CAS  PubMed  Google Scholar 

  • Barton, L.L., Abadia, J.: Iron Nutrition in Plants and Rhizospheric Microorganisms. — Springer-Verlag, New York 2006.

    Book  Google Scholar 

  • Bernard, D.G., Netz, D.J., Lagny, T.J., Pierik, A.J., Balk, J.; Requirements of the cytosolic iron-sulfur cluster assembly pathway in Arabidopsis. — Phil. Tran. roy. Soc. London B, Biol. Sci. 368: 20120259, 2013.

    Article  Google Scholar 

  • Couturier, J., Touraine, B., Briat, J.F., Gaymard, F., Rouhier, N.: The iron-sulfur cluster assembly machineries in plants; current knowledge and open questions. — Front. Plant Sci. 4; 259, 2013.

    PubMed Central  PubMed  Google Scholar 

  • Gerber, J., Muhlenhoff, U., Lill, R.: An interaction between frataxin and Isu1/Nfs1 that is crucial for Fe/S cluster synthesis on Isu1. — EMBO Rep. 4: 906–911, 2003.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Jacobs, G., Minnaar, H.R.: Light intensity and flower development of Leucospermum cordifolium. — HortScience 15: 644–645, 1998.

    Google Scholar 

  • Johnson, D.C., Dean, D.R., Smith, A.D., Johnson, M.K.; Structure, function, and formation of biological iron-sulfur clusters. — Annu. Rev. Biochem. 74: 247–281, 2005.

    Article  CAS  PubMed  Google Scholar 

  • Levitan, A., Danon, A., Lisowsky, T.: Unique features of plant mitochondrial sulfhydryl oxidase. — J. biol. Chem. 279; 20002–20008, 2004.

    Article  CAS  PubMed  Google Scholar 

  • Liang, X.J., Qin, L., Liu, P.W., Wang, M.H., Ye, H.: Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. — Plant Cell Environ. 37: 780–794, 2014.

    Article  CAS  PubMed  Google Scholar 

  • Lill, R., Muhlenhoff, U.: Iron-sulfur protein biogenesis in eukaryotes: components and mechanisms. — Annu. Rev. cell. Dev. Biol. 22: 457–486, 2006.

    Article  CAS  PubMed  Google Scholar 

  • Lill, R.: Function and biogenesis of iron-sulphur proteins. — Nature 460: 831–838, 2009.

    Article  CAS  PubMed  Google Scholar 

  • Ma, R.J., Zhang, Y., Yu, M.L., Xu, J.L., Shen, Z.J., Cai, Z.X., Shen, J.H.: [Breeding of a new peach variety Hongfenjiaren for ornamental use.] — Jiangsu J. agr. Sci. 27: 1421–1422, 2011. [In Chinese]

    Google Scholar 

  • Menzel, C.M., Simpson, D.R.: Effect of continuous shading on growth, flowering and nutrient uptake of passion fruit. — Scientia Hort. 35: 77–88, 1988.

    Article  Google Scholar 

  • Murthy, N.U.M., Ollagnier-de-Choudens, S., Sanakis, Y., Abdel-Ghany, S.E., Rousset, C., Ye, H., Fontecave, M., Pilon-Smits, E.A.H., Pilon, M.: Characterization of Arabidopsis thaliana SufE2 and SufE3: functions in chloroplast iron-sulfur cluster assembly and NAD synthesis. — J. biol. Chem. 282: 18254–18264, 2007.

    Article  CAS  Google Scholar 

  • Pestana, M., Beja, P., Correia, P.J., Varennes, A.D., Faria, E.A.; Relationships between nutrient composition of flowers and fruit quality in orange trees grown in calcareous soil. — Tree Physiol. 25: 761–767, 2005.

    Article  CAS  PubMed  Google Scholar 

  • Picciocchi, A., Douce, R., Alban, C.: The plant biotin synthase reaction. Identification and characterization of essential mitochondrial accessory protein components. — J. biol. Chem. 278: 24966–24975, 2003.

    Article  CAS  PubMed  Google Scholar 

  • Qin, L., Wang, M.H., Chen, L.Y., Liang, X.J., Wu, Z.G., Lin, Z.H., Zuo, J., Feng, X.Y., Zhao, J., Liao, H., Ye, H.; Soybean Fe-S cluster biosynthesis regulated by external iron or phosphate fluctuation. — Plant Cell Rep. 34: 411–424, 2015.

    Article  CAS  PubMed  Google Scholar 

  • Ramarkers, C., Ruijter, J.M., Lekanne Deprez, R.H., Moorman, A.F.M.: Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. — Neurosci. Lett. 339: 62–66, 2003.

    Article  Google Scholar 

  • Raulfs, E.C., O’Carroll, I.P., Dos Santos, P.C., Unciuleac, M.C., Dean, D.R.: In vivo iron-sulfur cluster formation. — Proc. nat. Acad. Sci. USA 105: 8591–8596, 2008.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Rouault, T.A., Tong, W.H.: Iron-sulfur cluster biogenesis and human disease. — Trends Genet. 24: 398–407, 2008.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Song, Z.Z., Yang, Y., Ma, R.J., Xu, J.L., Yu, M.L.; Transcription of potassium transporter genes of KT/HAK/KUP family in peach seedlings and responses to abiotic stresses. — Biol. Plant. 59: 65–73, 2015.

    Article  CAS  Google Scholar 

  • Song, Z.Z., Yang, Y., Xu, J.L., Ma, R.J., Yu, M.L.; Physiological and transcriptional responses in the ironsulphur cluster assembly pathway under abiotic stress in peach (Prunus persica L.) seedlings. — Plant Cell Tissue Organ Cult. 117: 419–430, 2014.

    Article  CAS  Google Scholar 

  • Stutte G.W., Martin, G.C.: Effect of light intensity and carbohydrate reserves on flowering in olives. — J. amer. Soc. hort. Sci. 111: 27–31, 1986.

    CAS  Google Scholar 

  • Tagliavini, M., Abadía, J., Rombolà, A.D., Abadía, A., Tsipouridis, C., Marangoni, B.: Agronomic means for the control of iron deficiency chlorosis in deciduous fruit trees. — J. Plant Nutr. 23: 2007–2022, 2000.

    Article  CAS  Google Scholar 

  • Tagliavini, M., Rombolà, A.D.: Iron deficiency and chlorosis in orchard and vineyard ecosystems. — Eur. J. Agron. 15: 72–92, 2001.

    Article  Google Scholar 

  • Takubo, K., Morikawa, T., Nonaka, Y., Mizutani, M., Takenaka, S., Takabe, K., Takahashi, M.A., Ohta, D.; Identification and molecular characterization of mitochondrial ferredoxins and ferredoxin reductase from Arabidopsis. — Plant mol. Biol. 52: 817–830, 2003.

    Article  CAS  PubMed  Google Scholar 

  • Tone, Y., Kawai-Yamada, M., Uchimiya, H.: Isolation and characterization of Arabidopsis thaliana ISU1 gene. — Biochim. biophys. Acta 1680: 171–175, 2004.

    Article  CAS  PubMed  Google Scholar 

  • Tong, Z.G., Gao, Z.H., Wang, F., Zhou, J., Zhang, Z.: Selection of reliable reference genes for gene expression studies in peach using real-time PCR. — BMC mol. Biol. 10: 71, 2009.

    Article  PubMed Central  PubMed  Google Scholar 

  • Van Doorn, W.G., Kamdee, C.: Flower opening and closure: an update. — J. exp. Bot. 65: 5749–5757, 2014.

    Article  PubMed  Google Scholar 

  • Wu, J.F., Zhu, L.X., Geng, J., Jia, K.G.: [Effect of light intensity on Zaoyu peach flower development.] — J. Beijing Univ. Agr. 22: 17–19, 2007. [In Chinese]

    Google Scholar 

  • Xu, X.M., Møller, S.G.: AtSufE is an essential activator of plastidic and mitochondrial desulfurases in Arabidopsis. — EMBO J. 25: 900–909, 2006.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Ye, H., Abdel-Ghany, S.E., Anderson, T.D., Pilon-Smits, E.A., Pilon, M.: CpSufE activates the cysteine desulfurase CpNifS for chloroplastic Fe-S cluster formation. — J. biol. Chem. 273: 13264–13272, 2006.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. -L. Yu.

Additional information

Acknowledgments: This work was supported by grants from the National Natural Science Foundations of China (31501743), the China Agriculture Research System (CARS-31), the China Postdoctoral Science Foundation (2015M571713), and the Jiangsu Agriculture Science and Technology Innovation Fund (CX(14)2015).

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Song, Z.Z., Zhang, B.B., Zhang, C.H. et al. Differential expression of iron-sulfur cluster biosynthesis genes during peach flowering. Biol Plant 60, 79–85 (2016). https://doi.org/10.1007/s10535-015-0577-z

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10535-015-0577-z

Additional key words

Navigation