Skip to main content
Log in

Taxonomy of the yeast genus Vanderwaltozyma and proposal of Vanderwaltozyma meishanica sp. nov., Vanderwaltozyma huisunica sp. nov., and Vanderwaltozyma molinica sp. nov.

  • Original Paper
  • Published:
Antonie van Leeuwenhoek Aims and scope Submit manuscript

Abstract

Using electrophoretic karyotyping, RAPD fingerprinting and phylogenetic analysis of ribosomal RNA gene sequences, twenty-six Vanderwaltozyma strains were studied. Out of 19 strains isolated in mountainous areas of Taiwan, eighteen strains were isolated from soil and one strain was isolated from the fruiting body of mushroom, six were identified as V. polyspora and three as V. verrucispora. Based on the results of a multigene sequence analysis (D1/D2, ITS and mitochondrial COX II gene) and DNA–DNA reassociation, three new ascosporic members of the genus Vanderwaltozyma are formally described: V. huisunica sp. nov. (GA1S06T = CBS 12250T = BCRC 23260T), V. meishanica sp. nov. (EN4S02T = CBS 12249T = BCRC 23255T) and V. molinica sp. nov. (GJ8S05T = CBS 12251T = BCRC 23264T), and the holotypes of these novel species are assigned as BCRC 23260T, BCRC 23255T and BCRC 23264T, respectively.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Ezaki T, Hashimoto Y, Takeuchi N, Yamamoto H, Liu SL, Matsui K, Yabuuchi E (1988) Simple genetic method to identify viridans group streptococci by colorimetric dot hybridization and fluorometric hybridization in microdilution wells. J Clin Microbiol 26:1708–1713

    Article  CAS  Google Scholar 

  • Felsenstein J (1995) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791

    Article  Google Scholar 

  • Kurtzman CP (2003) Phylogenetic circumscription of Saccharomyces, Kluyveromyces and others members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora. FEMS Yeast Res 4:233–245

    Article  CAS  Google Scholar 

  • Kurtzman CP, Robnett CJ (1998) Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie van Leeuwenhoek 73:331–371

    Article  CAS  Google Scholar 

  • Kurtzman CP, Robnett CJ (2003) Phylogenetic relationships among yeasts of the ‘Saccharomyces complex’ determined from multigene sequence analyses. FEMS Yeast Res 3:417–432

    Article  CAS  Google Scholar 

  • Kurtzman CP, Fell JW, Boekhout T, Robert V (2011) Methods for isolation, phenotypic characterization and maintenance of yeasts. In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts, a taxonomic study, 5th edn. Elsevier, Amsterdam, pp 87–110

    Chapter  Google Scholar 

  • Lachance MA (2011) Vanderwaltozyma Kurtzman. In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts, a taxonomic study, 5th edn. Elsevier, Amsterdam, pp 883–886

    Chapter  Google Scholar 

  • Lee CF, Lee FL, Hsu WH, Phaff HJ (1994) Arthroascus fermentans a new yeast species isolated from soil in Taiwan. Int J Syst Bacteriol 44:303–307

    Article  CAS  Google Scholar 

  • Lee CF, Liu CH, Ninomiya S, Kawasaki H, Nakase T (2009a) Vanderwaltozyma verrucispora sp. nov., a new ascomycetous yeast species. FEMS Yeast Res 9:153–157

    Article  CAS  Google Scholar 

  • Lee CF, Yao CH, Liu YR, Hsieh CW, Young SS (2009b) Lachancea dasiensis sp. nov., an ascosporogenous yeast isolated from soil and leaves in Taiwan. Int J Syst Evol Microbiol 59:1818–1822

    Article  CAS  Google Scholar 

  • Lee CF, Yao CH, Liu YR, Young SS, Chang KS (2009c) Kazachstania wufongensis sp. nov., an ascosporogenous yeast isolated from soil in Taiwan. Antonie Van Leeuwenhoek 95:335–341

    Article  Google Scholar 

  • Liu CH, Young SS, Chang TC, Lee CF (2008) Candida dajiaensis sp. nov., Candida yuanshanicus sp. nov., Candida jianshihensis sp. nov., and Candida sanyiensis sp. nov., four anamorphic, ascomycetous yeast species isolated from soil in Taiwan. FEMS Yeast Res 8:815–822

    Article  CAS  Google Scholar 

  • Martini A, Phaff HJ (1973) The optical determination of DNA–DNA homologies in yeasts. Ann Microbiol 23:59–68

    Google Scholar 

  • Nakase T, Jindamorakot S, Tanaka K, Ninomiya S, Kawasaki H, Limtong S, Lee CF (2010) Vanderwaltozyma tropicalis sp. nov., a novel ascomycetous yeast species found in Thailand. J Gen Appl Microbiol 56:31–36

    Article  CAS  Google Scholar 

  • Paffetti D, Barberio C, Casalone E, Cavalieri D, Fani R, Fia G, Mori E, Polsinelli M (1995) DNA fingerprinting by random amplified polymorphic DNA and restriction fragment length polymorphism is useful for yeast typing. Res Microbiol 146:587–594

    Article  CAS  Google Scholar 

  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis, version 6.0. Mol Biol Evol 30:2725–2729

    Article  CAS  Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882

    Article  CAS  Google Scholar 

  • van der Walt JP (1956) Kluyveromyces—a new yeast genus of the Endomycetales. Antonie Van Leeuwenhoek 22:265–272

    Article  Google Scholar 

  • Vu D, Groenewald M, Szöke S, Cardinali G, Eberhardt U, Stielow B, de Vries M, Verkleij GJ, Crous PW, Boekhout T, Robert V (2016) DNA barcoding analysis of more than 9000 yeast isolates contributes to quantitative thresholds for yeast species and genera delimitation. Stud Mycol 85:91–105

    Article  CAS  Google Scholar 

  • Vu D, Groenewald M, de Vries M, Gehrmann T, Stielow B, Eberhardt U, Al-Hatmi A, Groenewald JZ, Cardinali G, Houbraken J, Boekhout T, Crous TPW, Robert V, Verkley GJM (2019) Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Stud Mycol 92:135–154

    Article  CAS  Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, New York, pp 315–322

    Google Scholar 

Download references

Funding

This study was supported by the joint Taiwanese–Russian grant from the Ministry of Science and Technology, Executive Yuan, Taiwan (MOST 107-2923-B-007-001-MY3) and the Russian Foundation for Basic Research (RFBR 18-54-52002 MHT_a).

Author information

Authors and Affiliations

Authors

Contributions

CFC performed research and wrote the paper; YRL performed research; GIN and ESN editing and helped supervise the project; CFL designed study and supervised the project.

Corresponding author

Correspondence to Ching-Fu Lee.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Chang, CF., Liu, YR., Naumov, G.I. et al. Taxonomy of the yeast genus Vanderwaltozyma and proposal of Vanderwaltozyma meishanica sp. nov., Vanderwaltozyma huisunica sp. nov., and Vanderwaltozyma molinica sp. nov.. Antonie van Leeuwenhoek 113, 663–676 (2020). https://doi.org/10.1007/s10482-019-01376-3

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10482-019-01376-3

Keywords

Navigation