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Temporal dynamics of hepatitis C genotypes in a five-year hospital-based surveillance in Northern Italy

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Abstract

Hepatitis C virus (HCV) genotypes have became important epidemiological markers in the management of HCV-infected subjects and infection treatment. The dynamics of HCV genotypes are changing in Europe. During a five-year (2009-2013) hospital-based surveillance in the area of Parma, Northern Italy, serum/plasma samples from 1,265 HCV RNA-positive subjects were genotyped. Subtypes 1b, 3a, and 1a were predominant (32.6 %, 19.1 %, and 17.8 %, respectively), with a correlation between viral load and gender. Subtypes 1a and 3a were more frequent in adults and males with a significant difference with the over-50 age group and females (P > 0.0001). Subtype 1b, as well as 2a/2c and G2 not-subtypeable (15.7 % and 7.2 %, respectively), were more common in females and in the over-50 age group compared to males (P < 0.0001, P < 0.0001, and P < 0.05, respectively) and the under-50 age group (P < 0.0001). While subtype 1b showed a nearly constant trend, subtype 1a peaked in 2012, when a consistent decrease in G2 was observed. The increasing detection of G4, mainly in adults, and subtypes 1a and 3a suggests their epidemiological relevance in the population. The detection of more than one HCV genotype in the same sample (0.2 %) and different genotypes in distant samples (5.1 %) from the same subject reinforces the opinion that re-infection and super-infection with different genotypes are not negligible events, especially in HIV-infected subjects. The dynamics of HCV genotypes could have significant implications for infection control.

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Abbreviations

DAA:

direct-acting antiviral

G:

genotype

HCV:

hepatitis C virus

HIV-1:

human immunodeficiency virus type 1

IDU:

intravenous drug user

n-s:

not-subtypeable

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Correspondence to F. De Conto.

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This study was funded by grants from the University of Parma (Fondi di Ateneo FIL 2014-FIL2014_DECONTO_MCS).

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Flora De Conto declares that she has no conflict of interest. Maria Cristina Medici declares that she has no conflict of interest. Francesca Ferraglia declares that she has no conflict of interest. Federica Pinardi declares that she has no conflict of interest. Alessandra Fazzi declares that she has no conflict of interest. Maria Cristina Arcangeletti declares that she has no conflict of interest. Carlo Chezzi declares that he has no conflict of interest. Adriana Calderaro declares that she has no conflict of interest.

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This article does not contain any studies with human participants or animals performed by any of the authors.

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HCV RNA detection and genotyping were performed according to a medical order; therefore, there was no need to obtain informed consent for the epidemiological analysis of related data.

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De Conto, F., Medici, M.C., Ferraglia, F. et al. Temporal dynamics of hepatitis C genotypes in a five-year hospital-based surveillance in Northern Italy. Arch Virol 161, 2727–2737 (2016). https://doi.org/10.1007/s00705-016-2975-8

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