Skip to main content
Log in

Differential interferon gene expression in bronchiolitis caused by respiratory syncytial virus-A genotype ON1

  • Original Investigation
  • Published:
Medical Microbiology and Immunology Aims and scope Submit manuscript

Abstract

Bronchiolitis severity is determined by a complex interaction among viral replication and antiviral immunity. The current respiratory syncytial virus (RSV)-A, genotype ON1 demonstrated a high replicative capacity but seemed to be clinically less severe than the previously circulating RSV-A, NA1. To learn insights about ON1 innate immune response, we analyzed expression levels of type I/III interferon (IFN)-related genes in the respiratory mucosa of infants with RSV bronchiolitis. We enrolled RSV-positive bronchiolitis patients over 12 epidemic seasons at a university hospital in Rome. From nasopharyngeal washings’ cells (46 positive to NA1, 47 to ON1 and 28 to RSV-B, genotype BA), the mRNA copy number of the type III IFN receptor (IFNLR1 and IL10RB subunits), and of the type I/III IFN-stimulated genes, MxA and ISG56, was calculated using the threshold cycle relative quantification method with respect to an invariant gene. Expression levels of type III IFN receptor subunits genes positively correlated to each other and did not differ in infants infected with different RSV genotypes. The ISGs levels also positively correlated between them but differed among groups. MxA levels were significantly higher in NA1-infected infants than in those with ON1 and BA; ISG56 expression was slightly higher in NA1 than in the other strains. Interestingly, a moderate negative correlation existed between viral load and both ISGs values in ON1-infected infants only. The reduced ISG levels elicited during infections with ON1 (and BA) may cause a weaker control of RSV replication and/or an inadequate host immune response which may impact the risk of respiratory sequelae.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

Similar content being viewed by others

References

  1. Griffiths C, Drews SJ, Marchant DJ (2017) Respiratory syncytial virus: infection, detection, and new options for prevention and treatment. Clin Microbiol Rev 30:277–319. https://doi.org/10.1128/cmr.00010-16

    Article  CAS  Google Scholar 

  2. Eshaghi A, Duvvuri VR, Lai R, Nadarajah JT, Li A, Patel SN, Low DE, Gubbay JB (2012) Genetic variability of human respiratory syncytial virus A strains circulating in Ontario: a novel genotype with a 72 nucleotide G gene duplication. PLoS One 7:e32807. https://doi.org/10.1371/journal.pone.0032807

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Pierangeli A, Trotta D, Scagnolari C, Ferreri ML, Nicolai A, Midulla F, Marinelli K, Antonelli G, Bagnarelli P (2014) Rapid spread of the novel respiratory syncytial virus A ON1 genotype, central Italy, 2011 to 2013. Euro Surveill 19:20843

    Article  Google Scholar 

  4. Midulla F, Nenna R, Scagnolari C, Petrarca L, Frassanito A, Viscido A, Arima S, Antonelli G, Pierangeli A (2019) How respiratory syncytial virus genotypes influence the clinical course in infants hospitalized for bronchiolitis. J Infect Dis 219:526–534. https://doi.org/10.1093/infdis/jiy496

    Article  PubMed  Google Scholar 

  5. Trento A, Casas I, Calderón A, Garcia-Garcia ML, Calvo C, Perez-Breña P, Melero JA (2010) Ten years of global evolution of the human respiratory syncytial virus BA genotype with a 60-nucleotide duplication in the G protein gene. J Virol 84:7500–7512. https://doi.org/10.1128/JVI.00345-10

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Hotard AL, Laikhter E, Brooks K, Hartert TV, Moore ML (2015) Functional analysis of the 60-nucleotide duplication in the respiratory syncytial virus buenos aires strain attachment glycoprotein. J Virol 89:8258–8266. https://doi.org/10.1128/JVI.01045-15

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Nicholson EG, Schlegel C, Garofalo RP, Mehta R, Scheffler M, Mei M, Piedra PA (2016) Robust cytokine and chemokine response in nasopharyngeal secretions: association with decreased severity in children with physician diagnosed bronchiolitis. J Infect Dis 214:649–655. https://doi.org/10.1093/infdis/jiw191

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Piedra FA, Mei M, Avadhanula V, Mehta R, Aideyan L, Garofalo RP, Piedra PA (2017) The interdependencies of viral load, the innate immune response, and clinical outcome in children presenting to the emergency department with respiratory syncytial virus-associated bronchiolitis. PLoS One 12:e0172953. https://doi.org/10.1371/journal.pone.0172953

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Thwaites RS, Coates M, Ito K, Ghazaly M, Feather C, Abdulla F, Tunstall T, Jain P, Cass L, Rapeport G, Hansel TT, Nadel S, Openshaw P (2018) Reduced nasal viral load and IFN responses in infants with respiratory syncytial virus bronchiolitis and respiratory failure. Am J Respir Crit Care Med 198:1074–1084. https://doi.org/10.1164/rccm.201712-2567OC

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Stier MT, Peebles RS Jr (2018) Host and viral determinants of respiratory syncytial virus-induced airway mucus. Ann Am Thorac Soc 15:S205–S209. https://doi.org/10.1513/AnnalsATS.201806-380AW

    Article  PubMed  PubMed Central  Google Scholar 

  11. Villenave R, Broadbent L, Douglas I, Lyons JD, Coyle PV, Teng MN, Tripp RA, Heaney LG, Shields MD, Power UF (2015) Induction and antagonism of antiviral responses in respiratory syncytial virus-infected pediatric airway epithelium. J Virol 89:12309–12318. https://doi.org/10.1128/JVI.02119-15

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Hillyer P, Mane VP, Chen A, Dos Santos MB, Schramm LM, Shepard RE, Luongo C, Le Nouën C, Huang L, Yan L, Buchholz UJ, Jubin RG, Collins PL, Rabin RL (2017) Respiratory syncytial virus infection induces a subset of types I and III interferons in human dendritic cells. Virology 504:63–72. https://doi.org/10.1016/j.virol.2017.01.017

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Wells AI, Coyne CB (2018) Type III interferons in antiviral defenses at barrier surfaces. Trends Immunol 39:848–858. https://doi.org/10.1016/j.it.2018.08.008

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Pierangeli A, Statzu M, Nenna R, Santinelli L, Petrarca L, Frassanito A, Gentile M, Antonelli G, Midulla F, Scagnolari C (2018) Interferon lambda receptor 1 (IFNL1R) transcript is highly expressed in rhinovirus bronchiolitis and correlates with disease severity. J Clin Virol 102:101–109. https://doi.org/10.1016/j.jcv.2018.03.003

    Article  CAS  PubMed  Google Scholar 

  15. Barik S (2013) Respiratory syncytial virus mechanisms to interfere with type 1 interferons. Curr Top Microbiol Immunol 372:173–191. https://doi.org/10.1007/978-3-642-38919-1_9

    Article  CAS  PubMed  Google Scholar 

  16. Scagnolari C, Midulla F, Selvaggi C, Monteleone K, Bonci E, Papoff P, Cangiano G, Di Marco P, Moretti C, Pierangeli A, Antonelli G (2012) Evaluation of viral load in infants hospitalized with bronchiolitis caused by respiratory syncytial virus. Med Microbiol Immunol 201:311–317. https://doi.org/10.1007/s00430-012-0233-6

    Article  PubMed  Google Scholar 

  17. Selvaggi C, Pierangeli A, Fabiani M, Spano L, Nicolai A, Papoff P, Moretti C, Midulla F, Antonelli G, Scagnolari C (2014) Interferon lambda 1–3 expression in infants hospitalized for RSV or HRV associated bronchiolitis. J Infect 68:467–477. https://doi.org/10.1016/j.jinf.2013.12.010

    Article  PubMed  Google Scholar 

  18. van den Kieboom CH, Ahout IM, Zomer A, Brand KH, de Groot R, Ferwerda G, de Jonge MI (2015) Nasopharyngeal gene expression, a novel approach to study the course of respiratory syncytial virus infection. Eur Respir J 45:718–725. https://doi.org/10.1183/09031936.00085614

    Article  PubMed  Google Scholar 

  19. Turi KN, Shankar J, Anderson LJ, Rajan D, Gaston K, Gebretsadik T, Das SR, Stone C, Larkin EK, Rosas-Salazar C, Brunwasser SM, Moore ML, Peebles RS Jr, Hartert TV (2018) Infant viral respiratory infection nasal immune-response patterns and their association with subsequent childhood recurrent wheeze. Am J Respir Crit Care Med 198:1064–1073. https://doi.org/10.1164/rccm.201711-2348OC

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Stokes KL, Chi MH, Sakamoto K, Newcomb DC, Currier MG, Huckabee MM, Lee S, Goleniewska K, Pretto C, Williams JV, Hotard A, Sherrill TP, Peebles RS Jr, Moore ML (2011) Differential pathogenesis of respiratory syncytial virus clinical isolates in BALB/c mice. J Virol 85:5782–5793. https://doi.org/10.1128/JVI.01693-10

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Levitz R, Wattier R, Phillips P, Solomon A, Lawler J, Lazar I, Weibel C, Kahn JS (2012) Induction of IL-6 and CCL5 (RANTES) in human respiratory epithelial (A549) cells by clinical isolates of respiratory syncytial virus is strain specific. Virol J 9:190. https://doi.org/10.1186/1743-422X-9-190

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  22. Levitz R, Gao Y, Dozmorov I, Song R, Wakeland EK, Kahn JS (2017) Distinct patterns of innate immune activation by clinical isolates of respiratory syncytial virus. PLoS One 12:e0184318. https://doi.org/10.1371/journal.pone.0184318

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Hillyer P, Shepard R, Uehling M, Krenz M, Sheikh F, Thayer KR, Huang L, Yan L, Panda D, Luongo C, Buchholz UJ, Collins PL, Donnelly RP, Rabin RL (2018) Differential responses by human respiratory epithelial cell lines to respiratory syncytial virus reflect distinct patterns of infection control. J Virol 92(15):e02202-17. https://doi.org/10.1128/JVI.02202-17

    Article  PubMed  PubMed Central  Google Scholar 

  24. Pierangeli A, Gentile M, Di Marco P, Pagnotti P, Scagnolari C, Trombetti S, Lo Russo L, Tromba V, Moretti C, Midulla F, Antonelli G (2007) Detection and typing by molecular techniques of respiratory viruses in children hospitalized for acute respiratory infection in Rome, Italy. J Med Virol 79:463–468. https://doi.org/10.1002/jmv.20832

    Article  PubMed  Google Scholar 

  25. Makris S, Paulsen M, Johansson C (2017) Type I interferons as regulators of lung inflammation. Front Immunol 8:259. https://doi.org/10.3389/fimmu.2017.00259

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  26. Do LAH, Pellet J, van Doorn HR, Tran AT, Nguyen BH, Tran TTL, Tran QH, Vo QB, Tran Dac NA, Trinh HN, Nguyen TTH, Le Binh BT, Nguyen HMK, Nguyen MT, Thai QT, Vo TV, Ngo NQM, Dang TKH, Cao NH, Tran TV, Ho LV, De Meulder B, Auffray C, Hofstra JJ, Farrar J, Bryant JE, de Jong M, Hibberd ML (2017) Host transcription profile in nasal epithelium and whole blood of hospitalized children under 2 years of age with respiratory syncytial virus infection. J Infect Dis 217:134–146. https://doi.org/10.1093/infdis/jix519

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  27. Ramilo O, Mejias A (2018) Respiratory syncytial virus-induced acute disease severity and long-term wheezing. Uncovering the unexpected. Am J Respir Crit Care Med 198:984–986. https://doi.org/10.1164/rccm.201805-0908ED

    Article  PubMed  PubMed Central  Google Scholar 

  28. Jordan WJ, Eskdale J, Srinivas S, Pekarek V, Kelner D, Rodia M, Gallagher G (2007) Human interferon lambda-1 (IFN-lambda1/IL-29) modulates the Th1/Th2 response. Genes Immun 8:254–261. https://doi.org/10.1038/sj.gene.6364382

    Article  CAS  PubMed  Google Scholar 

  29. Hijano DR, Vu LD, Kauvar LM, Tripp RA, Polack FP, Cormier SA (2019) Role of type I interferon (IFN) in the respiratory syncytial virus (RSV) immune response and disease severity. Front Immunol 10:566 (Epub 2019 Mar 26)

    Article  CAS  Google Scholar 

  30. Fedele G, Schiavoni I, Nenna R, Pierangeli A, Frassanito A, Leone P, Petrarca L, Scagnolari C, Midulla F (2018) Analysis of the immune response in infants hospitalized with viral bronchiolitis shows different Th1/Th2 profiles associated with respiratory syncytial virus and human rhinovirus. Pediatr Allergy Immunol 29:555–557. https://doi.org/10.1111/pai.12919

    Article  PubMed  Google Scholar 

  31. Midulla F, Pierangeli A, Cangiano G, Bonci E, Salvadei S, Scagnolari C, Moretti C, Antonelli G, Ferro V, Papoff P (2012) Rhinovirus bronchiolitis and recurrent wheezing: 1-year follow-up. Eur Respir J 39:396–402. https://doi.org/10.1183/09031936.00188210

    Article  CAS  PubMed  Google Scholar 

  32. Midulla F, Nicolai A, Ferrara M, Gentile F, Pierangeli A, Bonci E, Scagnolari C, Moretti C, Antonelli G, Papoff P (2014) Recurrent wheezing 36 months after bronchiolitis is associated with rhinovirus infections and blood eosinophilia. Acta Paediatr 103:1094–1099. https://doi.org/10.1111/apa.12720

    Article  PubMed  Google Scholar 

Download references

Acknowledgements

We are grateful to all the clinical teams at the Umberto I Hospital (Sapienza University of Rome) for their contribution in the management of infants hospitalized for bronchiolitis.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Alessandra Pierangeli.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Ethical approval

The Sapienza University Hospital research and ethics committee approved the study. Informed consent was obtained from parents or guardians of all infants. The research was conducted in accordance with the 1964 Helsinki Declaration and its later amendments.

Additional information

Edited by Matthias J. Reddehase.

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Pierangeli, A., Viscido, A., Bitossi, C. et al. Differential interferon gene expression in bronchiolitis caused by respiratory syncytial virus-A genotype ON1. Med Microbiol Immunol 209, 23–28 (2020). https://doi.org/10.1007/s00430-019-00633-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00430-019-00633-6

Keywords

Navigation