Abstract
Sex chromosomes differ from autosomes by dissimilar gene content and, at a more advanced stage of their evolution, also in structure and size. This is driven by the divergence of the Y or W from their counterparts, X and Z, due to reduced recombination and the resulting degeneration as well as the accumulation of sex-specific and sexually antagonistic genes. A paradigmatic example for Y-chromosome evolution is found in guppies. In these fishes, conflicting data exist for a morphological and molecular differentiation of sex chromosomes. Using molecular probes and the previously established linkage map, we performed a cytogenetic analysis of sex chromosomes. We show that the Y chromosome has a very large pseudoautosomal region, which is followed by a heterochromatin block (HCY) separating the subtelomeric male-specific region from the rest of the chromosome. Interestingly, the size of the HCY is highly variable between individuals from different population. The largest HCY was found in one population of Poecilia wingei, making the Y almost double the size of the X and the largest chromosome of the complement. Comparative analysis revealed that the Y chromosomes of different guppy species are homologous and share the same structure and organization. The observed size differences are explained by an expansion of the HCY, which is due to increased amounts of repetitive DNA. In one population, we observed also a polymorphism of the X chromosome. We suggest that sex chromosome-linked color patterns and other sexually selected genes are important for maintaining the observed structural polymorphism of sex chromosomes.
Similar content being viewed by others
References
Alexander HJ, Breden F (2004) Sexual isolation and extreme morphological divergence in the Cumana guppy: a possible case of incipient speciation. J Evol Biol 17:1238–1254
Baker WK (1958) Crossing over in heterochromatin. Am Nat 92:59–60
Blin N, Stafford DW (1976) A general method for isolation of high molecular weight DNA from eukaryotes. Nucleic Acids Res 3:2303–2308
Cnaani A (2013) The tilapias’ chromosomes influencing sex determination. Cytogenet Genome Res 141:195–205
Dzwillo M (1959) Genetische Untersuchungen an domestizierten Stämmen von Lebistes reticulatus (Peters). Mitt Zool Inst Mus Hamburg 5:143–186
Haskins CP, Young P, Hewitt RE, Haskins EF (1970) Stabilized heterozygosis of supergenes mediating certain Y-linked colour patterns in populations of Lebistes reticulatus. Heredity 25: 575–589
Hornaday K, Alexander S, Felix B (1994) Absence of repetitive DNA sequences associated with sex chromosomes in natural populations of the Trinidad guppy (Poecilia reticulata). J Mol Evol 39:431–433
Kallman KD (1975) The platyfish Xiphophorus maculatus. In: King RC (ed) Handbook of genetics. Plenum Press, New York, pp 81–132
Kirpichnikov VA (1981) Genetic basis of fish selection. Springer, New York
Kondo M, Nanda I, Hornung U, Schmid M, Schartl M (2004) Evolutionary origin of the medaka Y chromosome. Curr Biol 14:1664–1669
Kondo M, Nanda I, Schmid M, Schartl M (2009) Sex determination and sex chromosome evolution: insights from medaka. Sex Dev 3:88–98
Lin YW, Thi DA, Kuo PL, Hsu CC, Huang BD, Yu YH, Vogt PH, Krause W, Ferlin A, Foresta C, Bienvenu T, Schempp W, Yen PH (2005) Polymorphisms associated with the DAZ genes on the human Y chromosome. Genomics 86:431–438
Lindholm A, Breden F (2002) Sex chromosomes and sexual selection in poeciliid fishes. Am Nat 160(Suppl 6):S214–S224
Lindholm AK, Brooks R, Breden F (2004) Extreme polymorphism in a Y-linked sexually selected trait. Heredity 92:156–162
Lodi E (1978) Chromosome complement of the guppy, Poecilia reticulata Peters (Pisces, Osteichthyes). Caryologia 31:475–477
Magurran AE (2005) Evolutionary ecology—the Trinidadian Guppy. Oxford University Press, New York
Nanda I, Feichtinger W, Schmid M, Schröder JH, Zischler H, Epplen JT (1990) Simple repetitive sequences are associated with differentiation of the sex-chromosomes in the guppy fish. J Mol Evol 30:456–462
Nova P, Reutter BA, Rabova M, Zima J (2002) Sex-chromosome heterochromatin variation in the wood mouse, Apodemus sylvaticus. Cytogenet Genome Res 96:186–190
Phillip RB, Konkol NR, Reed KM, Stein JD (2001) Chromosome painting supports lack of homology among sex chromosomes in Oncorhynchus, Salmo, and Salvelinus (Salmonidae). Genetica 111:119–123
Poeser FN, Kempkes M, Isbrücker IJH (2005) Description of Poecilia (Acanthophacelus) wingein. sp. from the Paría Peninsula, Venezuela, including notes on Acanthophacelus Eigenmann, 1907 and other subgenera of Poecilia Bloch and Schneider, 1801 (Teleostei, Cyprinodontiformes, Poeciliidae). Contrib Zool 74:97–115
Repping S, Skaletsky H, Brown L, van Daalen SK, Korver CM, Pyntikova T, Kuroda-Kawaguchi T, de Vries JW, Oates RD, Silber S, van der Veen F, Page DC, Rozen S (2003) Polymorphism for a 1.6-Mb deletion of the human Y chromosome persists through balance between recurrent mutation and haploid selection. Nat Genet 35:247–251
Rodionova MI, Nikitin SV, Borodin PM (1996) Synaptonemal complex analysis of interspecific hybrids of Poecilia (Teleostei, Poecilidae). Braz J Genet 19:231–235
Schäfer R, Zischler H, Birsner U, Becker A, Epplen JT (1988) Optimized oligonucleotide probes for DNA fingerprinting. Electrophoresis 9:369–374
Schaller F, Fernandes AM, Hodler C, Munch C, Pasantes JJ, Rietschel W, Schempp W (2010) Y chromosomal variation tracks the evolution of mating systems in chimpanzee and bonobo. PLoS ONE 5:e12482
Schartl M (2004) Sex chromosome evolution in non-mammalian vertebrates. Curr Opin Genet Dev 14:634–641
Schmid M, Olert J, Klett C (1979) Chromosome-banding in amphibia. 3. Sex-chromosomes in Triturus. Chromosoma 71:29–55
Schmid M, Steinlein C, Bogart JP, Feichtinger W, Haaf T, Nanda I, del Pino EM, Duellman WE, Hedges SB (2012) The hemiphractid frogs. Phylogeny, embryology, life history, and cytogenetics. Cytogenet Genome Res 138:69–384
Schmidt J (1919) Racial investigations III. Experiments with Lebistes reticulatus (Peters). C R Trav Lab Carlsberg 14:1–8
Schories S, Meyer MK, Schartl M (2009) Description of Poecilia (Acanthophacelus) obscura n. sp., (Teleostei: Poeciliidae), a new guppy species from western Trinidad, with remarks on P. wingei and the status of the "“Endler's guppy". Zootaxa:35–50
Sumner AT (1972) A simple technique for demonstrating centromeric heterochromatin. Exp Cell Res 75:304–306
Takehana Y, Naruse K, Asada Y, Matsuda Y, Shin IT, Kohara Y, Fujiyama A, Hamaguchi S, Sakaizumi M (2012) Molecular cloning and characterization of the repetitive DNA sequences that comprise the constitutive heterochromatin of the W chromosomes of medaka fishes. Chromosome Res 20:71–81
Traut W, Winking H (2001) Meiotic chromosomes and stages of sex chromosome evolution in fish: zebrafish, platyfish and guppy. Chromosome Res 9:659–672
Tripathi N, Hoffmann M, Weigel D, Dreyer C (2009a) Linkage analysis reveals the independent origin of Poeciliid sex chromosomes and a case of atypical sex inheritance in the guppy (Poecilia reticulata). Genetics 182:365–374
Tripathi N, Hoffmann M, Willing EM, Lanz C, Weigel D, Dreyer C (2009b) Genetic linkage map of the guppy, Poecilia reticulata, and quantitative trait loci analysis of male size and colour variation. Proc R Soc B 276:2195–2208
Urton JR, McCann SR, Peichel CL (2011) Karyotype differentiation between two stickleback species (Gasterosteidae). Cytogenet Genome Res 135:150–159
van Oosterhout C, Trigg RE, Carvalho GR, Magurran AE, Hauser L, Shaw PW (2003) Inbreeding depression and genetic load of sexually selected traits: how the guppy lost its spots. J Evol Biol 16:273–281
Volff JN, Nanda I, Schmid M, Schartl M (2007) Governing sex determination in fish: regulatory putsches and ephemeral dictators. Sex Dev 1:85–99
Winge Ö (1922) One-sided masculine and sex-linked inheritance in Lebistes reticulatus. J Genet 12:145–162
Winge Ö (1923) Crossing-over between the X and the Y-chromosome in Lebistes. J Genet 13:201–217
Winge Ö (1927) The location of eighteen genes in Lebistes reticulatus. Genetics 18:1–43
Winge Ö (1934) The experimental alternation of sex chromosomes into autosomes and vice versa, as illustrated by Lebistes. Compt rend Lab Carlsberg, sér Physiol 21:1–49
Winge Ö, Ditlevsen E (1938) A lethal gene in the Y-chromosome of Lebistes. CR Trav Lab Carlsberg 22:203–210
Winge Ö, Ditlevsen E (1947) Colour inheritance and sex determination in Lebistes. Heredity 1:65–83
Acknowledgments
We thank Georg Schneider, Hugo Schwind, and Petra Weber for expert fish keeping, Monika Niklaus-Ruiz for the support in the preparation of this manuscript, and Dr. Indar Ramnarine (St. Augustine, Trinidad) for the help in obtaining a research and collection permit (AMJ/pj 18/02/2008). We are grateful to Prof. Dr. Johannes-Horst Schröder (Mariastein), Fred N Poeser (Amsterdam), and Felix Breden for the founder fish and Emil Linke (Euerbach) for the XX males from the Ca population of P. wingei. This work was supported by Deutsche Forschungsgemeinschaft.
Author information
Authors and Affiliations
Corresponding author
Electronic supplementary material
Below is the link to the electronic supplementary material.
Supplementary Figure 1
Comparison of the length of sex chromosomes and the largest autosome in different guppies. Measurements of X, Y, and the largest autosome were made from the same metaphases. Note that the Y chromosome is the largest chromosome in the karyotype of the EnCCFR and LP strains of P. wingei. FISH Probes; EnCCFR, LP, RS: BAC 36H23(green)-BAC 05C08 (red); Gr: BAC 34K02(green)-BAC 04G05(red) (JPEG 39.2 kb)
Suppl. Table 1
(DOC 35.5 kb)
Rights and permissions
About this article
Cite this article
Nanda, I., Schories, S., Tripathi, N. et al. Sex chromosome polymorphism in guppies. Chromosoma 123, 373–383 (2014). https://doi.org/10.1007/s00412-014-0455-z
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00412-014-0455-z