Skip to main content
Log in

Quantifying Variability in Four U.S. Streams Using a Long-Term Dataset: Patterns in Biotic Endpoints

  • Published:
Environmental Management Aims and scope Submit manuscript

Abstract

Effective water resources assessment and management requires quantitative information on the variability of ambient and biological conditions in aquatic communities. Although it is understood that natural systems are variable, robust estimates of long-term variation in community-based structure and function metrics are rare in U.S. waters. We used a multi-year, seasonally sampled dataset from multiple sites (n = 5–6) in four streams (Codorus Creek, PA; Leaf River, MS; McKenzie and Willamette Rivers, OR) to examine spatial and temporal variation in periphyton chlorophyll a, and fish and macroinvertebrate metrics commonly used in bioassessment programs. Within-site variation of macroinvertebrate metrics and benthic chlorophyll a concentration showed coefficient of variation ranging from 16 to 136 %. Scale-specific variability patterns (stream-wide, season, site, and site-season patterns) in standardized biotic endpoints showed that within-site variability patterns extended across sites with variability greatest in chlorophyll a and lowest in Hilsenhoff’s Biotic Index. Across streams, variance components models showed that variance attributed to the interaction of space and time and sample variance accounted for the majority of variation in macroinvertebrate metrics and chlorophyll a, while most variation in fish metrics was attributed to sample variance. Clear temporal patterns in measured endpoints were rare and not specific to any one stream or assemblage, while apparent shifts in metric variability related to point source discharges were seen only in McKenzie River macroinvertebrate metrics in the fall. Results from this study demonstrate the need to consider and understand spatial, seasonal, and longer term variability in the development of bioassessment programs and subsequent decisions.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9
Fig. 10
Fig. 11

Similar content being viewed by others

References

  • Aloi JE (1990) A critical review of recent freshwater periphyton field methods. Can J Fish Aquat Sci 47:656–670

    Article  Google Scholar 

  • American Public Health Association, American Water Works Association and Water Environment Federation (APHA, AWWA and WEF) (2000) Standard methods for the examination of water and wastewater, 20th edn. APHA, Washington, DC

    Google Scholar 

  • Association of Clean Water Administrators (ACWA) (2012) Use of biological assessment in state water programs: focus on nutrients. ACWA, Washington, DC

    Google Scholar 

  • Barbour M, Gerritsen J, Snyder BD, Stribling JB (1999) Rapid bioassessment protocols for use in streams and wadeable rivers: periphyton, benthic macroinvertebrates and fish. EPA 841-B-99-002, 3rd edn. U.S. Environmental Protection Agency, Office of Water, Washington, DC

    Google Scholar 

  • Barton DR, Metcalfe-Smith JL (1992) A comparison of sampling techniques and summary indices for assessment of water quality in the Yamaska River, Québec, based on benthic macroinvertebrates. Environ Monit Assess 21:225–244

    Article  CAS  Google Scholar 

  • Bêche LA, Resh VH (2007a) Short-term climatic trends affect the temporal variability in California ‘Mediterranean’ streams. Freshw Biol 52:2317–2339

    Article  Google Scholar 

  • Bêche LA, Resh VH (2007b) Biological traits of benthic macroinvertebrates in California Mediterranean-climate streams: long term annual variability and trait diversity patterns. Fundam Appl Limnol 169:1–23

    Article  Google Scholar 

  • Bêche LA, Connors PG, Resh VH, Merenlender AM (2009) Resilience of fishes and invertebrates to prolonged drought in two California streams. Ecography 32:778–788

    Article  Google Scholar 

  • Biggs BJF, Kilroy C (1996) Stream periphyton monitoring manual. National Institute of Water and Atmospheric Research, Christchurch

    Google Scholar 

  • Brown BL (2003) Spatial heterogeneity reduces temporal variability in stream insect communities. Ecol Lett 6:316–325

    Article  Google Scholar 

  • Cao Y, Hawkins CP, Olson J (2007) Modeling natural environmental gradients improves the accuracy and precision of diatom-based indicators. J N Am Benthol Soc 26:566–585

    Article  Google Scholar 

  • Cardinale BJ, Palmer MA, Swan CM, Brooks S, Poff NL (2002) The influence of substrate heterogeneity on biofilm metabolism in a stream ecosystem. Ecology 83:412–422

    Article  Google Scholar 

  • Carter JL, Resh VH (2001) After site selection and before data analysis: sampling, sorting, and laboratory procedures used in stream benthic macroinvertebrate monitoring programs by USA state agencies. J N Am Benthol Soc 20:658–682

    Article  Google Scholar 

  • Cooper SD, Barmuta L, Sarnelle O, Kratz K, Diehl S (1997) Quantifying spatial heterogeneity in streams. J N Am Benthol Soc 16:174–188

    Article  Google Scholar 

  • Dodds WK, Robinson CT, Gaiser EE, Hansen GJA, Powell H, Smith JM, Morse NB, Johnson SL, Gregory SV, Bell T, Kratz TK, McDowell WH (2012) Surprises and insights from long-term aquatic data sets and experiments. Bioscience 62:709–721

    Article  Google Scholar 

  • Downes BJ, Hindell JS, Bond NR (2000) What is a site? Variation in lotic macroinvertebrate density and diversity in a spatially replicated experiment. Aust J Ecol 25:128–139

    Article  Google Scholar 

  • Dudley JL, Arthurs W, Hall TJ (2001) A comparison of methods used to estimate river rock surface areas. J Freshw Ecol 16:257–261

    Article  Google Scholar 

  • Fayram AH, Miller MA, Colby AC (2005) Effects of stream order and ecoregion on variability in coldwater fish index of biotic integrity scores within streams in Wisconsin. J Freshw Ecol 20:17–25

    Article  Google Scholar 

  • Flinders CA, Ragsdale RL, Hall TJ (2009) Patterns of fish community structure in a long-term watershed-scale study to address the aquatic ecosystem effects of pulp and paper mill discharges in four U.S. receiving streams. Integr Environ Assess Manag 5:219–233

    Article  CAS  Google Scholar 

  • Florida Department of Environmental Protection (FDEP) (2011) Sampling and use of the stream condition index (SCI) for assessing flowing waters: a primer. Standards and Assessment Section Bureau of Assessment and Restoration Support DEP-SAS-001/11. FDEP, Tallahassee

    Google Scholar 

  • Franklin JF (1988) Importance and justification of long-term studies in ecology. In: Likens GE (ed) Long-term studies in ecology: approaches and alternatives. Springer, New York, pp 3–19

    Google Scholar 

  • Gebler JB (2004) Mesoscale spatial variability of selected aquatic invertebrate community metrics from a minimally impaired stream site. J N Am Benthol Soc 23:616–633

    Article  Google Scholar 

  • Gregg DC, Stednick JD (2000) Variability in measures of macroinvertebrate community structure by stream reach and stream class. J Am Water Resour Assoc 36:95–103

    Article  Google Scholar 

  • Hall LW, Scott MC, Killen WD (1996) Development of biological indicators based on fish assemblages in Maryland coastal plain streams. CBWP-MANTA-EA-96-1. Maryland Department of Natural Resources, Chesapeake Bay and Watershed Programs, Annapolis

    Google Scholar 

  • Hall TJ, Fisher RP, Rodgers JL, Minshall GW, Landis WG, Kovacs TG, Firth BK, Dubé MG, Deardorff TL, Borton DL (2009a) A long-term multitrophic level study to assess pulp and paper mill effluent effects on aquatic communities in four United States receiving waters: background and status. Integr Environ Assess Manag 5:189–198

    Article  CAS  Google Scholar 

  • Hall TJ, Ragsdale RL, Arthurs WJ, Ikoma J, Borton DL, Cook DL (2009b) A long-term multi-trophic level study to assess pulp and paper mill effluent effects on aquatic communities in 4 U.S. receiving waters: characteristics of the study streams, sample sites, mills, and mill effluents. Integr Environ Assess Manag 5:199–218

    Article  CAS  Google Scholar 

  • Hart DD, Finelli CM (1999) Physical-biological coupling in streams: the pervasive effects of flow on benthic organisms. Annu Rev Ecol Syst 30:363–395

    Article  Google Scholar 

  • Hawkins CP, Olson JR, Hill RA (2010) The reference condition: predicting benchmarks for ecological and water-quality assessments. J N Am Benthol Soc 29:312–343

    Article  Google Scholar 

  • Hester FE, Dendy JS (1962) A multiple sampler for aquatic macroinvertebrates. Trans Am Fish Soc 91:420–421

    Article  Google Scholar 

  • Hill AM, Lodge DM (1999) Replacement of resident crayfishes by an exotic crayfish: the roles of competition and predation. Ecol Appl 9:678–690

    Article  Google Scholar 

  • Hilsenhoff WL (1987) An improved biotic index of organic stream pollution. Gt Lakes Entomol 20:31–39

    Google Scholar 

  • Hilsenhoff WL (1988) Rapid field assessment of organic pollution with a family level biotic index. J N Am Benthol Soc 7:65–68

    Article  Google Scholar 

  • Hitt NP, Angermeier PL (2008) River-stream connectivity affects fish bioassessment performance. Environ Manag 42:132–150

    Article  Google Scholar 

  • Idaho Department of Health and Welfare (1993) Water quality monitoring protocols report no. 5. Protocols for assessment of biotic integrity (macroinvertebrates) for wadeable Idaho streams. Idaho Department of Health and Welfare, Washington, DC

    Google Scholar 

  • Jackson JK, Füreder L (2006) Long-term studies of freshwater macroinvertebrates: a review of the frequency, duration and ecological significance. Freshw Biol 51:591–603

    Article  Google Scholar 

  • Johnson RC, Carreiro MM, Jin H-S, Jack JD (2012) Within-year temporal variation and life-cycle seasonality affect stream macroinvertebrate community structure and biotic metrics. Ecol Indic 13:206–214

    Article  Google Scholar 

  • Kohler SL, Hoiland WK (2001) Population regulation in an aquatic insect: the role of disease. Ecology 82:2294–2305

    Article  Google Scholar 

  • Larsen DP, Kincaid TM, Jacobs SE, Urquhart NS (2001) Designs for evaluating local and regional scale trends. Bioscience 51:1069–1078

    Article  Google Scholar 

  • Legendre P, Legendre L (1998) Numerical ecology. Elsevier, New York

    Google Scholar 

  • Leung ASL, Dudgeon D (2011) Scales of spatiotemporal variability in macroinvertebrate abundance and diversity in monsoonal streams: detecting environmental change. Freshw Biol 56:1193–1208

    Article  Google Scholar 

  • Li H, Reynolds JE (1995) On definition and quantification of heterogeneity. Oikos 73:280–284

    Article  Google Scholar 

  • Li J, Herlihy A, Gerth W, Kaufmann P, Gregory S, Urquhart S, Larsen DP (2001) Variability in stream macroinvertebrates at multiple spatial scales. Freshw Biol 46:87–97

    Article  Google Scholar 

  • Lindenmayer DB, Likens GE (2009) Adaptive monitoring: a new paradigm for long-term research and monitoring. Trends Ecol Evol 24:482–486

    Article  Google Scholar 

  • Lindenmayer DB, Likens GE, Krebs CJ, Hobbs RJ (2010) Improved probability of detection of ecological “surprises”. Proc Natl Acad Sci 107:21957–21962

    Article  CAS  Google Scholar 

  • Linke S, Bailey RC, Schwindt J (1999) Temporal variability of stream bioassessments using benthic macroinvertebrates. Freshw Biol 42:575–584

    Article  Google Scholar 

  • Lunde KB, Cover MR, Mazor RD, Sommers CA, Resh VH (2013) Identifying reference conditions and quantifying biological variability within benthic macroinvertebrate communities in perennial and non-perennial northern California streams. Environ Manag 51:1262–1273

    Article  Google Scholar 

  • Maxted JR, Barbour MT, Gerritsen J, Poretti V, Primrose N, Silvia A, Penrose D, Renfrow R (2000) Assessment framework for mid-Atlantic coastal plain streams using benthic macroinvertebrates. J N Am Benthol Soc 19:128–144

    Article  Google Scholar 

  • Mazor RD, Purcell AH, Resh VH (2009) Long-term variability in bioassessments: a twenty-year study from two northern California streams. Environ Manag 43:1269–1286

    Article  Google Scholar 

  • Mazor RD, Stein ED, Ode PR, Schiff K (2014) Integrating intermittent streams into watershed assessments: applicability of an index of biotic integrity. Freshwater Sci 33:459–474

    Article  Google Scholar 

  • Merritt RW, Cummins KW (1996) An introduction to the aquatic insects of North America, 3rd edn. Kendall/Hunt, Dubuque

    Google Scholar 

  • Mykrä H, Heino J, Muotka T (2004) Variability of lotic macroinvertebrate assemblages and stream habitat characteristics across hierarchical landscape classifications. Environ Manag 34:341–352

    Article  Google Scholar 

  • National Climatic Data Center (NOAA) (2002) State of the climate: drought for August 2002. http://www.ncdc.noaa.gov/sotc/drought/2002/8. Accessed 2 March 2015

  • Nelson JS, Crossman EJ, Espinosa-Pérez H, Findley LT, Gilbert CR, Lea RN, Williams JD (eds) (2004) Common and scientific names of fishes from the United States, Canada and Mexico. American Fisheries Society, Bethesda

    Google Scholar 

  • Omernik JM (1995) Ecoregions: a spatial framework for environmental management. In: Davis WS, Simon TP (eds) Biological assessment and criteria. Tools for water resource planning and decision making. Lewis Publishers, Boca Raton, pp 49–62

    Google Scholar 

  • Palmer MA, Hakenkamp CC, Nelson-Baker K (1997) Ecological heterogeneity in streams: why variance matters. J N Am Benthol Soc 16:189–202

    Article  Google Scholar 

  • Peterson JT, Paukert CP (2009) Chapter 12: converting nonstandard fish sampling data to standardized data. In: Bonar SA, Hubert WA, Willis DW (eds) Standard methods for sampling North American freshwater fishes. American Fisheries Society, Washington, DC

    Google Scholar 

  • Pyron M, Lauer TE, Gammon JR (2006) Stability of the Wabash River fish assemblages from 1974 to 1998. Freshw Biol 51:1789–1797

    Article  Google Scholar 

  • Pyron M, Lauer TE, LeBlanc D, Weitzel D, Gammon JR (2008) Temporal and spatial variation in an index of biotic integrity for the middle Wabash River, Indiana. Hydrobiologia 600:205–214

    Article  Google Scholar 

  • Rabeni CF, Wang N, Sarver RJ (1999) Evaluating adequacy of the representative stream reach used in invertebrate monitoring programs. J N Am Benthol Soc 18:284–291

    Article  Google Scholar 

  • Resh VH, Bêche LA, Lawrence JE, Mazor RD, McElravy EP, O’Dowd AP, Rudnick D, Carlson SM (2013) Long-term population and community patterns of benthic macroinvertebrates and fishes in Northern California Mediterranean-climate streams. Hydrobiologia 719:93–118

    Article  Google Scholar 

  • Robson BJ, Hogan M, Forrester T (2005) Hierarchical patterns of invertebrate assemblage structure in stony upland streams change with time and flow permanence. Freshw Biol 50:944–953

    Article  Google Scholar 

  • Sandin L, Johnson RK (2000) The statistical power of selected indicator metrics using macroinvertebrates for assessing acidification and eutrophication of running waters. Hydrobiologia 422:233–243

    Article  Google Scholar 

  • Schaefer J, Mickle P, Spaeth J, Kreiser BR, Adams S, Matamoros W, Zuber B, Vigueira (2006) Effects of hurricane Katrina on the fish fauna of the Pascagoula River drainage. In: Proceedings from the 36th annual Mississippi water resources conference, pp 62–68

  • Schlosser IJ (1990) Environmental variation, life history attributes, and community structure in stream fishes: implications for environmental management and assessment. Environ Manag 14:621–628

    Article  Google Scholar 

  • Schoolmaster DR Jr, Grace JB, Schweiger EW (2012) A general theory of multimetric indices and their properties. Methods Ecol Evol 3:773–781

    Article  Google Scholar 

  • Simon TP (1991) Development of ecoregion expectations for the index of biotic integrity. I. Central corn belt plain. EPA 905-9-91-025. U.S. Environmental Protection Agency, Region 5, Chicago

    Google Scholar 

  • Simpson JC, Norris RH (2000) Biological assessment of water quality: development of AUSRIVAS models and outputs. In: Wright JF, Sutcliffe DW, Furse MT (eds) Assessing the biological quality of freshwaters: RIVPACS and similar techniques. Freshwater Biological Association, Ambleside, pp 125–142

    Google Scholar 

  • Sokal RJ, Rohlf FJ (1995) Biometry, 3rd edn. W.H. Freeman and Company, New York

    Google Scholar 

  • Stevenson RJ, Pan Y, Manoylov KM, Parker CA, Larsen DP, Herlihy AT (2008) Development of diatom indicators of ecological conditions for streams of the western US. J N Am Benthol Soc 27:1000–1016

    Article  Google Scholar 

  • United States Environmental Protection Agency (USEPA) (2002) Summary of biological assessment programs and biocriteria development for states, tribes, territories, and interstate commissions: streams and wadeable rivers. EPA-822-R-02-048. U.S. Environmental Protection Agency, Washington, DC

    Google Scholar 

  • Wang H, Fu R, Kumar A, Li W (2010) Intensification of summer rainfall variability in the southeastern United States during recent decades. J Hydrometeorol 11:1007–1018

    Article  Google Scholar 

  • West Virginia Department of Environmental Protection (WV DEP) (2009) 2009 standard operating procedures V01 SOP. WV DEP, Charleston

    Google Scholar 

  • Wieczorek ME, LaMotte AE (2010) Attributes for NHDPlus catchments (version 1.1) for the conterminous United States: NLCD 2001 land use and land cover. U.S. Geological Survey Digital Data Series DDS-490-15. http://water.usgs.gov/GIS/metadata/usgswrd/XML/nhd_nlcd01.xml. Accessed January 2011

  • Zuellig RE, Carlisle DM, Meador MR, Potapova M (2012) Variance partitioning of stream diatom, fish, and invertebrate indicators of biological condition. Freshw Sci 31:182–190

    Article  Google Scholar 

Download references

Acknowledgments

B. Arthurs and J. Ikoma played a significant role in field sampling, fish identification, and data entry, with field assistance during the course of the study from R. Ragsdale, J. Thomas, D. McGarvey, B. Streblow, R. Philbeck, D. Brodhecker, A. Helfrich, T. Pearce-Smith, F. Howell, and J. Napack. Discussions with M. Dubé, W. Landis, W. Minshall, J. Rodgers, and S. Missimer on study design and analysis were valuable. W. Arthurs assisted with formatting, data analysis, and the preparation of Figure 1; and we appreciate editing and formatting assistance from S. Easthouse. Feedback from W. Minshall and P. Wiegand improved earlier versions of the manuscript. Thorough and thoughtful reviews and suggestions provided by two anonymous reviewers further improved the manuscript.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Camille A. Flinders.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Flinders, C.A., McLaughlin, D.B. & Ragsdale, R.L. Quantifying Variability in Four U.S. Streams Using a Long-Term Dataset: Patterns in Biotic Endpoints. Environmental Management 56, 447–466 (2015). https://doi.org/10.1007/s00267-015-0509-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00267-015-0509-x

Keywords

Navigation