Abstract
Rhizosphere microorganisms populate the soil near and under the influence of plant roots. In agriculture, the microbes interact with a particular crop plant, while in nature, the plant population is diverse. This leads to an almost un-countable number of possible interactions, but research has focused on some that are significant because of their contribution to plant nutrition and crop yield, as models for basic research, or agents of soilborne diseases. This includes symbioses with nitrogen-fixing rhizobia, and mycorrhizae. To introduce some of the concepts discussed in this volume, we emphasize these two examples, because the molecular signals from the plant and from the microbial symbiont are both known. The second focus of this chapter is to chart the types of interactions between plant and microbes and among the soil microbial populations. Finally, it is important to note the outlook for applications in agriculture, in particular where the microbes and their capacity for interaction can be engineered or selected to improve crop yield and suppress diseases.
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References
Akiyama K, Matsuzaki KI, Hayashi H (2005) Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435:824–827. https://doi.org/10.1038/nature03608
Alonso-Ramírez A, Poveda J, Martín I et al (2014) Salicylic acid prevents Trichoderma harzianum from entering the vascular system of roots. Mol Plant Pathol 15:823–831. https://doi.org/10.1111/mpp.12141
Bonfante P, Genre A (2015) Arbuscular mycorrhizal dialogues: do you speak “plantish” or “fungish”? Trends Plant Sci 20:150–154
Chang HX, Noel ZA, Chilvers MI (2021a) A β-lactamase gene of Fusarium oxysporum alters the rhizosphere microbiota of soybean. Plant J 106:1588–1604. https://doi.org/10.1111/tpj.15257
Chang J, Sun Y, Tian L et al (2021b) The structure of rhizosphere fungal communities of wild and domesticated rice: changes in diversity and co-occurrence patterns. Front Microbiol 12:610823. https://doi.org/10.3389/fmicb.2021.610823
Chialva M, Lanfranco L, Bonfante P (2022) The plant microbiota: composition, functions, and engineering. Curr Opin Biotechnol 73:135–142
Chiu CH, Paszkowski U (2021) How membrane receptors tread the fine balance between symbiosis and immunity signaling. Proc Natl Acad Sci U S A 118(24):e2106567118
Deng S, Caddell DF, Xu G et al (2021) Genome wide association study reveals plant loci controlling heritability of the rhizosphere microbiome. ISME J. https://doi.org/10.1038/s41396-021-00993-z
Emmett BD, Lévesque-Tremblay V, Harrison MJ (2021) Conserved and reproducible bacterial communities associate with extraradical hyphae of arbuscular mycorrhizal fungi. ISME J 15:2276–2288. https://doi.org/10.1038/s41396-021-00920-2
Gaete A, Pulgar R, Hodar C et al (2021) Tomato cultivars with variable tolerances to water deficit differentially modulate the composition and interaction patterns of their rhizosphere microbial communities. Front Plant Sci 12:688533. https://doi.org/10.3389/fpls.2021.688533
Hakim S, Naqqash T, Nawaz MS et al (2021) Rhizosphere engineering with plant growth-promoting microorganisms for agriculture and ecological sustainability. Front Sustain Food Syst 5:16
Herrera-Medina MJ, Tamayo MI, Vierheilig H et al (2008) The jasmonic acid signalling pathway restricts the development of the arbuscular mycorrhizal association in tomato. J Plant Growth Regul 27:221–230. https://doi.org/10.1007/s00344-008-9049-4
Kang H, Chen X, Kemppainen M et al (2020) The small secreted effector protein MiSSP7.6 of Laccaria bicolor is required for the establishment of ectomycorrhizal symbiosis. Environ Microbiol 22:1435–1446. https://doi.org/10.1111/1462-2920.14959
Khalid S, Keller NP (2021) Chemical signals driving bacterial–fungal interactions. Environ Microbiol 23:1334–1347
Khokhani D, Carrera Carriel C, Vayla S et al (2021) Deciphering the chitin code in plant symbiosis, defense, and microbial networks. Annu Rev Microbiol 75:583–607. https://doi.org/10.1146/annurev-micro-051921-114809
Lammertz M, Kuhn H, Pfeilmeier S et al (2019) Widely conserved attenuation of plant MAMP-induced calcium influx by bacteria depends on multiple virulence factors and may involve desensitization of host pattern recognition receptors. Mol Plant-Microbe Interact 32:608–621. https://doi.org/10.1094/MPMI-10-18-0291-R
Lerouge P, Roche P, Faucher C et al (1990) Symbiotic host-specificity of Rhizobium meliloti is determined by a sulphated and acylated glucosamine oligosaccharide signal. Nature 344:781–784. https://doi.org/10.1038/344781a0
Liu Y, Yang H, Liu Q et al (2021) Effect of two different sugarcane cultivars on rhizosphere bacterial communities of sugarcane and soybean upon intercropping. Front Microbiol 11:596472. https://doi.org/10.3389/fmicb.2020.596472
Maillet F, Poinsot V, André O et al (2011) Fungal lipochitooligosaccharide symbiotic signals in arbuscular mycorrhiza. Nature 469:58–64. https://doi.org/10.1038/nature09622
Martínez-Medina A, Appels FVW, van Wees SCM (2017) Impact of salicylic acid- and jasmonic acid-regulated defences on root colonization by Trichoderma harzianum T-78. Plant Signal Behav 12:e1345404. https://doi.org/10.1080/15592324.2017.1345404
Mukherjee PK, Mehetre ST, Sherkhane PD et al (2019) A novel seed-dressing formulation based on an improved mutant strain of Trichoderma virens, and its field evaluation. Front Microbiol 10:1910. https://doi.org/10.3389/fmicb.2019.01910
Oldroyd GED (2013) Speak, friend, and enter: signalling systems that promote beneficial symbiotic associations in plants. Nat Rev Microbiol 11:252–263
Peters NK, Frost JW, Long SR (1986) A plant flavone, luteolin, induces expression of Rhizobium meliloti nodulation genes. Science 233:977–980. https://doi.org/10.1126/science.3738520
Phour M, Sehrawat A, Sindhu SS, Glick BR (2020) Interkingdom signaling in plant-rhizomicrobiome interactions for sustainable agriculture. Microbiol Res 241:126589
Plett JM, Kemppainen M, Kale SD et al (2011) A secreted effector protein of Laccaria bicolor is required for symbiosis development. Curr Biol 21:1197–1203. https://doi.org/10.1016/j.cub.2011.05.033
Plett JM, Daguerre Y, Wittulsky S et al (2014a) Effector MiSSP7 of the mutualistic fungus Laccaria bicolor stabilizes the Populus JAZ6 protein and represses jasmonic acid (JA) responsive genes. Proc Natl Acad Sci U S A 111:8299–8304. https://doi.org/10.1073/pnas.1322671111
Plett JM, Khachane A, Ouassou M et al (2014b) Ethylene and jasmonic acid act as negative modulators during mutualistic symbiosis between Laccaria bicolor and Populus roots. New Phytol 202:270–286. https://doi.org/10.1111/NPH.12655
Rush TA, Puech-Pagès V, Bascaules A et al (2020) Lipo-chitooligosaccharides as regulatory signals of fungal growth and development. Nat Commun 11:3897. https://doi.org/10.1038/s41467-020-17615-5
Sangwan S, Prasanna R (2021) Mycorrhizae helper bacteria: unlocking their potential as bioenhancers of plant–arbuscular mycorrhizal fungal associations. Microb Ecol. https://doi.org/10.1007/s00248-021-01831-7
Shen Q, Liu Y, Naqvi NI (2018) Fungal effectors at the crossroads of phytohormone signaling. Curr Opin Microbiol 46:1–6
Trivedi P, Mattupalli C, Eversole K, Leach JE (2021) Enabling sustainable agriculture through understanding and enhancement of microbiomes. New Phytol 230:2129–2147
Wagner MR (2021) Prioritizing host phenotype to understand microbiome heritability in plants. New Phytol 232(2):502–509
Wang X, Feng H, Wang Y et al (2021) Mycorrhizal symbiosis modulates the rhizosphere microbiota to promote rhizobia–legume symbiosis. Mol Plant 14:503–516. https://doi.org/10.1016/j.molp.2020.12.002
Zamioudis C, Pieterse CMJ (2012) Modulation of host immunity by beneficial microbes. Mol Plant-Microbe Interact 25:139–150
Zhang C, He J, Dai H et al (2021) Discriminating symbiosis and immunity signals by receptor competition in rice. Proc Natl Acad Sci U S A 118:e2023738118. https://doi.org/10.1073/PNAS.2023738118
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Horwitz, B.A., Mukherjee, P.K. (2022). Plant-Microbe Cross Talk in the Rhizosphere: Introductory Remarks. In: Horwitz, B.A., Mukherjee, P.K. (eds) Microbial Cross-talk in the Rhizosphere. Rhizosphere Biology. Springer, Singapore. https://doi.org/10.1007/978-981-16-9507-0_1
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DOI: https://doi.org/10.1007/978-981-16-9507-0_1
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