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Genotoxic Biomarkers as Indicators of Marine Pollution

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Marine Pollution and Microbial Remediation

Abstract

The marine environment is the recipient of a wide range of pollutants including sewage, heavy metals, nanoparticles, petroleum hydrocarbons, and radiation which will ultimately affect the natural populations of aquatic organisms. These pollutants affect the integrity of the genome and lead to DNA damage. Genotoxicity tests such as the micronucleus test and comet assay are sensitive, reliable, and powerful techniques which are employed to assess the DNA damage. These tests can be designed on a wide variety of cells from any marine organism and can be performed either in the field or in the laboratory. The micronucleus test and comet assay can also be used as biomarkers along with other biochemical tests to evaluate the toxicity status of a particular marine water body. This review explores the use of these tests in different organisms under varying degrees of marine pollution. Further, it is recommended to use these two parameters together in order to confirm the holistic mutagenic/genotoxic effect of the test agents.

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References

  • Alamri OD, Cundy AB, Di Y, Jha AN, Rotchell JM (2012) Ionizing radiation-induced DNA damage response identified in marine mussels, Mytilus sp. Environ Pollut 168:107–112

    Article  CAS  Google Scholar 

  • Almeida C, Pereira CG, Gomes T, Cardoso C, Bebianno MJ, Cravo A (2013) Genotoxicity in two bivalve species from a coastal lagoon in the south of Portugal. Mar Environ Res 89:29–38

    Article  CAS  Google Scholar 

  • Al-Sabti K, Metcalfe CD (1995) Fish micronuclei for assessing genotoxicity in water. Mutat Res 343:2–3

    Google Scholar 

  • Anbumani S, Mohankumar MN (2011) Nuclear and cytoplasmic abnormalities in the fish Catla catla (Hamilton) exposed to chemicals and ionizing radiation. Res J Environ Sci 5:867–877

    Article  CAS  Google Scholar 

  • Anbumani S, Mohankumar MN (2012) Gamma radiation induced micronuclei and erythrocyte cellular abnormalities in the fish Catla catla. Aquat Toxicol 122–123:125–132

    Article  Google Scholar 

  • Anbumani S, Mohankumar MN (2015) Gamma radiation induced cell cycle perturbations and DNA damage in Catla Catla as measured by flow cytometry. Ecotox Environ Safe 113:18–22

    Article  CAS  Google Scholar 

  • Anbumani S, Mohankumar MN, Selvanayagam M (2012) Flow cytometric assessment of DNA damage in the fish Catla catla (Ham.) exposed to gamma radiation. J Adv Biotechnol 11(8):36–40

    Google Scholar 

  • Bakan G, Böke Ă–zkoç H (2007) An ecological risk assessment of the impact of heavy metals in surface sediments on biota from the mid-Black Sea coast of Turkey. Int J Environ Stud 64(1):45–57

    Article  CAS  Google Scholar 

  • Baker TJ, Tyler CR, Galloway TS (2014) Impacts of metal and metal oxide nanoparticles on marine organisms. Environ Pollut 186:257–271

    Article  CAS  Google Scholar 

  • BarÅ¡iene J, Lazutka J, Å yvokiene J, Dedonyte V, Rybakovas A, Bjornstad A, Andersen OK (2004) Analysis of micronuclei in blue mussels and fish from the Baltic and the North Seas. Environ Toxicol 19:365–371

    Article  Google Scholar 

  • BarÅ¡iene J, Lehtonen KK, Koehler A, Broeg K, Vuorinen PJ, Lang T, Pempkowiak J, Syvokien J, Dedonyte V, Rybakovas A, Repecka R, Vuontisjarvi H, Kopecka J (2006a) Biomarker responses in flounder (Platichthys flesus) and mussel (Mytilus edulis) in the Klaipeda-Butinge area (Baltic Sea). Mar Pollut Bull 53:422–436

    Article  Google Scholar 

  • BarÅ¡iene J, Dedonyte V, Rybakovas A, Andreikenait L, Andersen OK (2006b) Investigation of micronuclei and other nuclear abnormalities in peripheral blood and kidney of marine fish treated with crude oil. Aquat Toxicol 78S:S99–S104

    Article  Google Scholar 

  • BarÅ¡ienÄ— J, Rybakovas A, Lang T, Grygiel W, AndreikÄ—naitÄ— L, Michailovas A (2012) Risk of environmental genotoxicity in the Baltic Sea over the period of 2009–2011 assessed by micronuclei frequencies in blood erythrocytes of flounder (Platichthys flesus), herring (Clupea harengus) and eelpout (Zoarces viviparus). Mar Environ Res 77:35–42

    Article  Google Scholar 

  • Bat L, Gökkurt O, Sezgin M, ĂœstĂ¼n F, Sahin F (2009) Evaluation of the Black Sea Land based sources of pollution the coastal region of Turkey. Open Mar Biol J 3:112–124

    Article  CAS  Google Scholar 

  • Bihari N, Fafandel M (2004) Interspecies differences in DNA single strand breaks caused by benzo(α)pyrene and marine environment. Mutat Res/Fundam Mol Mech Mutagen 552(1/2):209–217

    Article  CAS  Google Scholar 

  • Binelli A, Riva C, Provini A (2007) Biomarkers in Zebra mussel for monitoring and quality assessment of Lake Maggiore (Italy). Biomarkers 12(4):349–368

    Article  CAS  Google Scholar 

  • Bolognesi C, Cirillo S (2014) Genotoxicity biomarkers in aquatic bioindicators. Curr Zool 60(2):273–284

    Article  CAS  Google Scholar 

  • Bolognesi C, Hayashi M (2011) Review: micronucleus assay in aquatic animals. Mutagenesis 26(1):205–213

    Article  CAS  Google Scholar 

  • Cassidy CL, Lemon JA, Boreham DR (2007) Impacts of low-dose gamma-radiation on genotoxic risk in aquatic ecosystems. Dose-Response 5:323–332

    Article  CAS  Google Scholar 

  • CavaÅŸ T, Ergene-Gozukara S (2005a) Induction of micronuclei and nuclear abnormalities in Oreochromis niloticus following exposure to petroleum refinery and chromium processing plant effluents. Aquat Toxicol 74:264–271

    Article  Google Scholar 

  • CavaÅŸ T, Ergene-Gozukara S (2005b) Micronucleus test in fish cells: a bioassay for in situ monitoring of genotoxic pollution in the marine environment. Environ Mol Mutagen 46:64–70

    Article  Google Scholar 

  • Chen G, White PA (2004) The mutagenic hazards of aquatic sediments: a review. Mutat Res 567(2–3):151–225

    Article  CAS  Google Scholar 

  • Collins AR (2004) The comet assay for DNA damage and repair: principles, applications and limitations. Mol Biotechnol 26:249–261

    Article  CAS  Google Scholar 

  • Costa PM, Lobo J, Caeiro S, Martins M, Ferreira AM, Caetano M, Vale C, Delvalls TA, Costa MH (2008) Genotoxic damage in Solea senegalensis exposed to sediments from the Sado Estuary (Portugal): effects of metallic and organic contaminants. Mutat Res 654(1):29–37

    Article  CAS  Google Scholar 

  • Da Silva Souza T, Fontanetti CS (2006) Micronucleus test and observation of nuclear alterations in erythrocytes of Nile tilapia exposed to waters affected by refinery effluent. Ecotox Environ Safe 605:87–93

    Google Scholar 

  • Dallas LJ, Jha AN (2015) Applications of biological tools or biomarkers in aquatic biota: a case study of the Tamar Estuary, South West England. Mar Pollut Bull 95(2):618–633

    Article  CAS  Google Scholar 

  • Dallas LJ, Keith-Roach M, Lyons BP, Jha AN (2012) Assessing the impact of ionizing radiation on aquatic invertebrates: a critical review. Radiat Res 177:693–716

    Article  CAS  Google Scholar 

  • Dallas LJ, Cheung VV, Fisher AS, Jha AN (2013) Relative sensitivity of two marine bivalves for detection of genotoxic and cytotoxic effects: a field assessment in the Tamar Estuary, South West England. Environ Monit Assess 185(4):3397–3412

    Article  CAS  Google Scholar 

  • Dasgupta S, Cao A, Mauer B, Yan B, Uno S, McElroy A (2014) Genotoxicity of oxy-PAHs to Japanese medaka (Oryzias latipes) embryos assessed using the comet assay. Environ Sci Pollut Res Int 21:13867–13876

    Article  CAS  Google Scholar 

  • de Andrade VM, da Silva J, Silva FR, Heuser VD, Dias JF, Yoneama ML, Freitas TR (2004) Fish as bioindicators to assess the effects of pollution in two southern Brazilian rivers using the Comet assay and micronucleus test. Environ Mol Mutagen 44(5):459–468

    Article  Google Scholar 

  • Depledge MH (1994) The rational basis for the use of biomarkers as ecological tools. In: Fossi MC, Leonzio C (eds) Nondestructive biomarkers in vertebrates. Lewis Publishers, Boca Raton, pp 271–295

    Google Scholar 

  • DĂ©vier MH, DĂ»-Lacoste L, Akcha F, Morin B, Peluhet L, Le Menach K, Burgeot T, Budzinski H (2013) Biliary PAH metabolites, EROD activity and DNA damage in dab (Limanda limanda) from Seine Estuary (France). Environ Sci Pollut Res 20:708–722

    Article  Google Scholar 

  • EPIC Project (2001) Environmental contamination from ionising contaminants in the Arctic. First Annual Report (01.11.2000–31.10.2001). Project ICA2-CT-2000-10032

    Google Scholar 

  • FASSET Project (2001) Framework for assessment of environmental impact. Progress report N 1 (1.11.2000–31.10.2001). A project within the EC 5th framework programme. http://www.fasset.org

  • FernĂ¡ndez B, Campillo JA, MartĂ­nez-GĂ³mez C, Benedicto J (2011) Micronuclei and other nuclear abnormalities in mussels (Mytilus galloprovincialis) as biomarkers of cyto-genotoxic pollution in mediterranean waters. Environ Mol Mutagen 52(6):479–491

    Article  Google Scholar 

  • FernĂ¡ndez-Tajes J, FlĂ³rez F, Pereira S, RĂ¡bade T, Laffon B, MĂ©ndez J (2011) Use of three bivalve species for biomonitoring a polluted estuarine environment. Environ Monit Assess 177(1–4):289–300

    Article  Google Scholar 

  • Frenzilli G, Lyons BP (2013) The comet assay in marine animals. Methods Mol Biol 1044:363–372

    Article  CAS  Google Scholar 

  • Gomes T, AraĂºjo O, Pereira R, Almeida AC, Cravo A, Bebianno MJ (2013) Genotoxicity of copper oxide and silver nanoparticles in the mussel Mytilus galloprovincialis. Mar Environ Res 84:51–59

  • Gorbi S, Virno Lamberti C, Notti A, Benedetti M, Fattorini D, Moltedo G, Regoli F (2008) An ecotoxicological protocol with caged mussels, Mytilus galloprovincialis, for monitoring the impact of an offshore platform in the Adriatic Sea. Mar Environ Res 65(1):34–49

    Article  CAS  Google Scholar 

  • Guilherme S, Santos MA, Gaivao I, Pacheco M (2014) Genotoxicity evaluation of the herbicide Garlon®and its active ingredient (triclopyr) in fish (Anguilla anguilla L.) using the comet assay. Environ Toxicol. Epub http://dx.doi.org/10.1002/tox.21980

  • Gustavino B, Scornajenghi KA, Minissi S, Ciccotti E (2001) Micronuclei induced in erythrocytes of Cyprinus carpio (teleostei, Pisces) by X-rays and colchicines. Mutat Res 494:151–159

    Article  CAS  Google Scholar 

  • Hagger JA, Atienzar FA, Jha AN (2005) Genotoxic, cytotoxic, developmental and survival effects of tritiated water in the early life stages of the marine mollusc, Mytilus edulis. Aquat Toxicol 74:205–217

    Article  CAS  Google Scholar 

  • IAEA (1992) Effects of ionizing radiation on plants and animals at levels implied by current radiation protection standards, vol 332, Technical reports series. International Atomic Energy Agency, Vienna

    Google Scholar 

  • ICRP (2007) The 2007 recommendations of the international commission on radiological protection. ICRP publication 103. Ann ICRP 37:2–4

    Article  Google Scholar 

  • Ilyinskikh NN, Ilyinskikh EN, Ilyinskikh IN (1998) Micronucleated erythrocytes frequency and radiocesium bioconcentration in pikes (Esox lucius) caught in the Tom River near the nuclear facilities of the Siberian Chemical Complex (Tomsk-7). Fundam Mol Mech Mutagen 421:197–203

    Article  CAS  Google Scholar 

  • Jaeschke BC, Millward GE, Moody AJ, Jha AN (2010) Tissue-specific incorporation and genotoxicity of different forms of tritium in the marine mussel, Mytilus edulis. Environ Pollut 159(1):274–280

    Article  Google Scholar 

  • Jarvis RB, Knowles JF (2003) DNA damage in zebrafish larvae induced by exposure to low-dose rate gamma-radiation: detection by the alkaline comet assay. Mutat Res-Genet Toxicol Environ Mutagen 541:63–69

    Article  CAS  Google Scholar 

  • Jha AN, Dogra Y, Turner A, Millward GE (2005) Impact of low doses of tritium on the marine mussel, Mytilus edulis: genotoxic effects and tissue-specific bioconcentration. Mutat Res 586:47–57

    Article  CAS  Google Scholar 

  • Jha AN, Dogra Y, Turner A, Millward GE (2006) Are low doses of tritium genotoxic to Mytilus edulis? Mar Environ Res 62:297–300

    Article  Google Scholar 

  • Kadam SB, Shyama SK, Almeida VG (2013) Evaluation of the in vivo genotoxic effects of gamma radiation on the peripheral blood leukocytes of head and neck cancer patients undergoing radiotherapy. Mutat Res Genet Toxicol Environ Mutagen 752:42–46

    Article  CAS  Google Scholar 

  • Kirkland D, Aardema M, Henderson L, Mueller L (2005) Evaluation of the ability of a battery of 3 in vitro genotoxicity tests to discriminate rodent carcinogens and non- carcinogens. I. Sensitivity, specificity and relative predictivity. Mutat Res 584:1–256

    Article  CAS  Google Scholar 

  • Knowles JF (2002) An investigation into the effects of chronic radiation on fish. In: R&D Technical Reports. Environment Agency, Bristol. P3-053/TR

    Google Scholar 

  • Lemos J, Costa P, Cunha L, Carvalho AP, Neuparth T, GenĂ©sio P, Ponte F, Costa P, Crespo P, Metello L (2014) Assessing radiobiological effects of diagnostic level doses of ionizing radiation on zebrafish using comet assay. J Nucl Med 55:1426

    Google Scholar 

  • Lonsdale DJ, Cerrato RM, Holland R, Mass A, Holt L, Schaffner RA, Pan J, Caron DA (2009) Influence of suspension-feeding bivalves on the pelagic food webs of shallow, coastal embayments. Aquat Biol 6:263–279

    Article  Google Scholar 

  • Malyapa SR, Bi C, Ahern EW, Roti Roti JL (1998) Detection of DNA damage by the alkaline comet assay after exposure to low-dose gamma radiation. Radiat Res 149:396–400

    Article  CAS  Google Scholar 

  • Mitchelmore CL, Chipman JK (1998) DNA strand breakage in aquatic organisms and the potential value of the comet assay in environmental monitoring. Mutat Res 399(2):135–147

    Article  CAS  Google Scholar 

  • Osman AGM (2014) Genotoxicity tests and their contributions in aquatic environmental research. J Environ Prot 5:1391–1399

    Article  CAS  Google Scholar 

  • Pandey AK, Nagpure NS, Trivedi SP (2014) Evaluation of genotoxicity of profenofos to freshwater fish Channa punctatus (Bloch) using the micronucleus assay. Afr J Biotechnol 13(39):3985–3988

    Article  CAS  Google Scholar 

  • Pimenta VM, da Silva JM, Nepomuceno JC, Pavanin LA (2013) In situ assessment of the Paraguay River water, in Brazilian Pantanal, by means of micronucleus assay with fish and chemical analysis. Bull Environ Contam Toxicol 90:427–433

    Article  Google Scholar 

  • Pisoni M, Cogotzi L, Frigeri A, Corsi I, Bonacci S, Iacocca A, Lancini L, Mastrototaro F, Focardi S, Svelti M (2004) DNA adducts, benzo(α)pyrene monooxygenase activity and lysosomal membrane stability in Mytilus galloprovincialis from different areas in Taranto coastal waters (Italy). Environ Res 96:163–175

    Article  CAS  Google Scholar 

  • Praveen Kumar MK, Shyama SK, Sonaye BS, Naik RU, Kadam SB, Bipin PD, D’costa A, Chaubey RC (2014) Evaluation of γ- radiation induced DNA damage in two species of bivalves and their relative sensitivity using comet assay. Aquat Toxicol 150:1–8

    Article  CAS  Google Scholar 

  • Praveen Kumar MK, Shyama SK, Sonaye BS, D’costa A, Chaubey RC (2015) The effect of gamma radiation on the Common carp (Cyprinus carpio): in vivo genotoxicity assessment with the micronucleus and comet assay. Mutat Res 792:19–25

    Google Scholar 

  • Rank J (2009) Intersex in Littorina littorea and DNA damage in Mytilus edulis as indicators of harbour pollution. Ecotoxicol Environ Saf 72(4):1271–1277

    Article  CAS  Google Scholar 

  • Sacchi A, Mouneyrac C, Bolognesi C, Sciutto A, Roggieri P, Fusi M, Beone GM, Capri E (2013) Biomonitoring study of an estuarine coastal ecosystem, the Sacca di Goro lagoon, using Ruditapes philippinarum (Mollusca: Bivalvia). Environ Pollut 177:82–89

    Article  CAS  Google Scholar 

  • Serafim A, Lopes B, Company R, Cravo A, Gomes T, Sousa V, Bebianno MJ (2011) A multi-biomarker approach in cross-transplanted mussels Mytilus galloprovincialis. Ecotoxicology 20(8):1959–1974

    Article  CAS  Google Scholar 

  • Shyama SK, Rahiman MA, Vijayalaxmi KK (1991) Genotoxic effect of Anovlar 21, an oral contraceptive, on mouse bone marrow. Mutat Res 260:47–53

    Article  CAS  Google Scholar 

  • Takai A, Kagawa N, Fujikawa K (2004a) Dose- and time-dependent responses for micronucleus induction by X-rays and fast neutrons in gill cells of medaka (Oryzias latipes). Environ Mol Mutagen 44:108–112

    Article  CAS  Google Scholar 

  • Takai A, Kagawa N, Fujikawa K (2004b) Susceptibility of male and female medaka (Oryzias latipes) fish to spontaneous and X-ray induced micronucleus formation in gill cells. Mutat Res 558:131–136

    Article  CAS  Google Scholar 

  • Tice RR, Agurell E, Anderson D, Burlinson B, Hartman A, Kobayashi H, Miyamae Y, Royas E, Ryu JC, Sasaki YF (2000) Single cell gel/comet assay: guidelines for in vitro and in vivo genetic toxicology testing. Environ Mol Mutagen 35:206–221

    Article  CAS  Google Scholar 

  • Wang XH, Hong HS, Mu JL, Lin JQ, Wang SH (2008) Polycyclic aromatic hydrocarbon (PAH) metabolites in marine fishes as a specific biomarker to indicate PAH pollution in the marine coastal environment. J Environ Sci Health A Tox Hazard Subst Environ Eng 43(3):219–226

    Article  CAS  Google Scholar 

  • Winter MJ, Day N, Hayes RA, Taylor EW, Butler PJ, Chipman JK (2004) DNA strand breaks and adducts determined in feral and caged chub (Leuciscus cephalus) exposed to rivers exhibiting variable water quality around Birmingham, UK. Mutat Res 552(1–2):163–175

    Article  CAS  Google Scholar 

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Correspondence to S. K. Shyama .

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Praveen Kumar, M.K., D’costa, A., Shyama, S.K. (2017). Genotoxic Biomarkers as Indicators of Marine Pollution. In: Naik, M., Dubey, S. (eds) Marine Pollution and Microbial Remediation. Springer, Singapore. https://doi.org/10.1007/978-981-10-1044-6_17

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