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Carbon Monoxide. Toxic Gas and Fuel for Anaerobes and Aerobes: Carbon Monoxide Dehydrogenases

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The Metal-Driven Biogeochemistry of Gaseous Compounds in the Environment

Part of the book series: Metal Ions in Life Sciences ((MILS,volume 14))

Abstract

Carbon monoxide (CO) pollutes the atmosphere and is toxic for respiring organisms including man. But CO is also an energy and carbon source for phylogenetically diverse microbes living under aerobic and anaerobic conditions. Use of CO as metabolic fuel for microbes relies on enzymes like carbon monoxide dehydrogenase (CODH) and acetyl-CoA synthase (ACS), which catalyze conversions resembling processes that eventually initiated the dawn of life.

CODHs catalyze the (reversible) oxidation of CO with water to CO2 and come in two different flavors with unprecedented active site architectures. Aerobic bacteria employ a Cu- and Mo-containing CODH in which Cu activates CO and Mo activates water and takes up the two electrons generated in the reaction. Anaerobic bacteria and archaea use a Ni- and Fe-containing CODH, where Ni activates CO and Fe provides the nucleophilic water. Ni- and Fe-containing CODHs are frequently associated with ACS, where the CODH component reduces CO2 to CO and ACS condenses CO with a methyl group and CoA to acetyl-CoA.

Our current state of knowledge on how the three enzymes catalyze these reactions will be summarized and the different strategies of CODHs to achieve the same task within different active site architectures compared.

Please cite as: Met. Ions Life Sci. 14 (2014) 37–69

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Acknowledgment

Research in our laboratory has been supported by the German funding agency DFG through individual project grants (DO-785/1, DO-785/5, DO-785/6) and the Cluster of Excellence “Unifying Concepts in Catalysis - UniCat” (EXC 314).

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Authors and Affiliations

  1. Institut für Biologie, Strukturbiologie/Biochemie, Humboldt-Universität zu Berlin, Unter den Linden 6, D-10099, Berlin, Germany

    Jae-Hun Jeoung, Jochen Fesseler, Sebastian Goetzl & Holger Dobbek

Authors
  1. Jae-Hun Jeoung
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  2. Jochen Fesseler
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  3. Sebastian Goetzl
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  4. Holger Dobbek
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Corresponding author

Correspondence to Holger Dobbek .

Editor information

Editors and Affiliations

  1. Univ. Konstanz Fachbereich Biologie, Konstanz, Baden-Württemberg, Germany

    Peter M.H. Kroneck

  2. Facultad de Química Universidad Autónoma de México, Departamento de Química Inorganica y Nuclear, México, Distrito Federal, Mexico

    Martha E. Sosa Torres

Abbreviations

Abbreviations

ACS:

acetyl-CoA synthase

ACDS:

acetyl-CoA decarbonylase/synthase

CoA:

coenzyme A

CODH:

carbon monoxide dehydrogenase

CoFeSP:

corrinoid iron-sulfur protein

Ch :

Carboxydothermus hydrogenoformans

Cu,Mo-CODH:

Cu- and Mo-containing carbon monoxide dehydrogenase

ENDOR:

electron nuclear double resonance

EPR:

electron paramagnetic resonance

FAD:

flavin adenine dinucleotide

H4F:

tetrahydrofolate

HOMO:

highest occupied molecular orbital

LUCA:

last universal common ancestor

MCD:

molybdopterin cytosine dinucleotide

MeTr:

methyltransferase

Mt :

Moorella thermoacetica

Ni,Fe-CODH:

Ni- and Fe-containing carbon monoxide dehydrogenase

nBIC:

n-butyl isocyanide

PDB:

Protein Data Bank

Rr :

Rhodospirillum rubrum

SOMO:

singly occupied molecular orbital

Tg:

teragram

XO:

xanthine oxidase

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Jeoung, JH., Fesseler, J., Goetzl, S., Dobbek, H. (2014). Carbon Monoxide. Toxic Gas and Fuel for Anaerobes and Aerobes: Carbon Monoxide Dehydrogenases. In: Kroneck, P., Torres, M. (eds) The Metal-Driven Biogeochemistry of Gaseous Compounds in the Environment. Metal Ions in Life Sciences, vol 14. Springer, Dordrecht. https://doi.org/10.1007/978-94-017-9269-1_3

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