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Next Generation Sequencing and Germplasm Resources

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Genomics of Plant Genetic Resources

Abstract

DNA sequencing technology is advancing at an astounding rate, with rapid increases in data volumes and quality combined with reducing costs. The availability of this technology opens novel avenues for the analysis of plant germplasm resources. Where previous studies analysed a limited number of phenotypic or molecular genetic markers, it is now possible to re-sequence whole genomes to characterise diversity at a resolution of each nucleotide. Current approaches combine high resolution genetic markers with genome sequencing both for reference assembly and genotyping by sequencing. As next generation sequencing technologies continue to advance, we approach the potential to catalogue and characterise all genome variations across diverse germplasm to gain a greater understanding of how the genome contributes to the diversity seen in today’s plants.

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Authors and Affiliations

  1. University of Queensland, School of Agriculture and Food Sciences, 4072, Brisbane, QLD, Australia

    Paul Visendi, Jacqueline Batley & David Edwards

  2. Australian Centre for Plant Functional Genomics, University of Queensland, 4072, Brisbane, QLD, Australia

    Paul Visendi & David Edwards

Authors
  1. Paul Visendi
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  2. Jacqueline Batley
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  3. David Edwards
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Correspondence to David Edwards .

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Editors and Affiliations

  1. Agricultural Sciences, University of Bologna, Bologna, Italy

    Roberto Tuberosa

  2. Genebank, IPK, Gatersleben, Sachsen-Anhalt, Germany

    Andreas Graner

  3. Bioversity International, Rome, Italy

    Emile Frison

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Visendi, P., Batley, J., Edwards, D. (2014). Next Generation Sequencing and Germplasm Resources. In: Tuberosa, R., Graner, A., Frison, E. (eds) Genomics of Plant Genetic Resources. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-7572-5_15

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