Abstract
Fluorescence in situ hybridization (FISH) provides an effective means to delineate chromosomes and their subregions during all stages of the cell cycle. This makes FISH particularly useful for studying chromosome behavior in species with minute genomes and/or weak chromosome condensation at metaphase, which is the case for model organisms such as the budding yeast Saccharomyces cerevisiae or Schizosaccharomyces pombe. Since its introduction in 1992, yeast FISH with composite whole chromosome or locus-specific probes in combination with immunofluorescence staining has become an indispensable tool in the analysis of chromosome behavior in metaphase and interphase cells, and especially of meiotic chromosome pairing of wild-type and mutant yeast strains.
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References
Cherry JM, Adler C, Ball C et al (1998) SGD: saccharomyces genome database. Nucleic Acids Res 26:73–79
Goffeau AEA et al (1997) The yeast genome directory. Nature 387:S1–S105
Kater JM (1927) Cytology of Saccharomyces cerevisiae with special reference to nuclear division. Biol Bulletin 52:436–449
Wintersberger U, Binder M, Fischer P (1975) Cytogenetic demonstration of mitotic chromosomes in the yeast Saccharomyces cerevisiae. Mol Gen Genet 142:13–17
Kuroiwa T, Kojima H, Miyakawa I et al (1984) Meiotic karyotype of the yeast Saccharomyces cerevisiae. Exp Cell Res 153:259–265
Dresser M, Giroux C (1988) Meiotic chromosome behavior in spread preparations of yeast. J Cell Biol 106:567–573
Loidl J, Nairz K, Klein F (1991) Meiotic chromosome synapsis in a haploid yeast. Chromosoma 100:221–228
Scherthan H, Loidl J, Schuster T et al (1992) Meiotic chromosome condensation and pairing in Saccharomyces cerevisiae studied by chromosome painting. Chromosoma 101:590–595
Loidl J (2003) Chromosomes of the budding yeast Saccharomyces cerevisiae. Int Rev Cytol 222:141–196
Loidl J, Lorenz A (2009) Analysis of Schizosaccharomyces pombe meiosis by nuclear spreading. Methods Mol Biol 558:15–36
Guacci V, Hogan E, Koshland D (1994) Chromosome condensation and sister chromatid pairing in budding yeast. J Cell Biol 125:517–530
Loidl J, Klein F, Scherthan H (1994) Homologous pairing is reduced but not abolished in asynaptic mutants of yeast. J Cell Biol 125:191–200
Weiner BM, Kleckner N (1994) Chromosome pairing via multiple interstitial interactions before and during meiosis in yeast. Cell 77:977–991
Rockmill B, Sym M, Scherthan H et al (1995) Roles for two RecA homologs in promoting meiotic chromosome synapsis. Genes Dev 9:2684–2695
Gotta M, Laroche T, Gasser SM (1999) Analysis of nuclear organization in Saccharomyces cerevisiae. Methods Enzymol 304:663–672
Trelles-Sticken E, Adelfalk C, Loidl J et al (2005) Meiotic telomere clustering requires actin for its formation and cohesin for its resolution. J Cell Biol 170:213–223
Admire A, Shanks L, Danzl N et al (2006) Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast. Genes Dev 20:159–173
Straight AF, Belmont AS, Robinett CC, Murray AW (1996) GFP tagging of budding yeast chromosomes reveals that protein-protein interactions can mediate sister chromatid cohesion. Curr Biol 6:1599–1608
Michaelis C, Ciosk R, Nasmyth K (1997) Cohesins: chromosomal proteins that prevent premature separation of sister chromatids. Cell 91:35–45
Aragon-Alcaide L, Strunnikov AV (2000) Functional dissection of in vivo interchromosome association in Saccharomyces cerevisiae. Nat Cell Biol 2:812–818
Lorenz A, Fuchs J, Trelles-Sticken E et al (2002) Spatial organisation and behavior of the parental chromosome sets in the nuclei of Saccharomyces cerevisiae x S. paradoxus hybrids. J Cell Sci 115:3829–3835
Kilmartin JV, Wright B, Milstein C (1982) Rat monoclonal antitubulin antibodies derived by using a new nonsecreting rat cell line. J Cell Biol 93:576–582
Pringle JR, Adams AE, Drubin DG et al (1991) Immunofluorescence methods for yeast. Methods Enzymol 194:565–602
Kane SM, Roth R (1974) Carbohydrate metabolism during ascospore development in yeast. J Bacteriol 118:8–14
Trelles-Sticken E, Loidl J, Scherthan H (1999) Bouquet formation in budding yeast: initiation of recombination is not required for meiotic telomere clustering. J Cell Sci 112:651–658
Trelles-Sticken E, Dresser ME, Scherthan H (2000) Meiotic telomere protein Ndj1p is required for meiosis-specific telomere distribution, bouquet formation and efficient homologue pairing. J Cell Biol 151:95–106
Loidl J, Jin Q-W, Jantsch M (1998) Meiotic pairing and segregation of translocation quadrivalents in yeast. Chromosoma 107:247–254
Scherthan H, Loidl J (2010) FISH as a tool to investigate chromosome behavior in budding yeast. Methods Mol Biol 659:363–377
Roth R, Halvorson HO (1969) Sporulation of yeast harvested during logarithmic growth. J Bacteriol 98:831–832
Scherthan H, Bahler J, Kohli J (1994) Dynamics of chromosome organization and pairing during meiotic prophase in fission yeast. J Cell Biol 127:273–285
Acknowledgments
I thank J. Loidl, E. Trelles-Sticken, and A. Lorenz for stimulating discussions. The work in the lab of HS was partly supported by the DFG.
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Scherthan, H. (2017). Yeast Chromosome Dynamics Revealed by Immuno FISH. In: Liehr, T. (eds) Fluorescence In Situ Hybridization (FISH). Springer Protocols Handbooks. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-52959-1_50
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DOI: https://doi.org/10.1007/978-3-662-52959-1_50
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