Abstract
The main objective of this handbook paper is to summarize and compare various popular methods and approaches in the research area of dimensionality reduction of high-dimensional data sets, with emphasis on hyperspectral imagery data. In addition, the topics of our discussions will include data preprocessing, data geometry in terms of similarity/dissimilarity, construction of dimensionality reduction kernels, and dimensionality reduction algorithms based on these kernels.
References
Bachmann CM, Ainsworth TL, Fusina RA (2005) Exploiting manifold geometry in hyperspectral imagery. IEEE Trans Geosci Remote Sens 43:441–454
Bachmann CM, Ainsworth TL, Fusina RA (2006) Improved manifold coordinate representations of large-scale hyperspectral scenes. IEEE Trans Geosci Remote Sens 44:2786–2803
Bachmann CM, Ainsworth TL, Fusina RA, Montes MJ, Bowles JH, Korwan DR, Gillis L (2009) Bathymetric retrieval from hyperspectral imagery using manifold coordinate representations. IEEE Trans Geosci Remote Sens 47:884–897
Balasubramanian M, Schwaartz EL, Tenenbaum JB, de Silva V, Langford JC (2002) The isomap algorithm and topological stability. Science 29
Belkin M, Niyogi P (2002) Laplacian eigenmaps and spectral techniques for embedding and clustering. Adv Neural Inf Process Syst 14:585–591
Belkin M, Niyogi P (2003) Laplacian eigenmaps for dimensionality reduction and data representation. Neural Comput 15:1373–1396
Belkin M, Niyogi P (2004) Semi-surpervised learning on Riemannian manifolds. Mach Learn (special issue on clustering) 56:209–239
Borg I, Groenen P (1997) Modern multidimensional scaling. Springer, New York
Chan TF, Hansen PC (1992) Some applications of the rank-revealing QR factorization. SIAM J Sci Stat Comput 13:727–741
Cheng H, Gimbutas Z, Martinsson PG, Rokhlin V (2005) On the compression of low rank matrices. SIAM J Sci Comput 26:1389–1404
Chui CK (1992) An introduction to wavelets. Academic, Boston
Chui CK (1997) Wavelets: a mathematical tool for signal processing. SIAM, Philadelphia
Chui CK, Wang JZ (1991) A cardinal spline approach to wavelets. Proc Am Math Soc 113:785–793
Chui CK, Wang JZ (1992a) On compactly supported wavelet and a duality principle. Trans Am Math Soc 330:903–915
Chui CK, Wang JZ (1992b) A general framework of compactly supported splines and wavelets. J Approx Theory 71:263–304
Chui CK, Wang JZ (2008) Methods and algorithms for dimensionality reduction of HSI data. In: The 2nd advancing the automation of image analysis workshop (AAIA Workshop II), UCLA, Los Angeles, 29–31 July 2008
Chui CK, Wang, JZ (2010) Randomized anisotropic transform for nonlinear dimensionality reduction. Int J Geomath 1:23–50
Coifman RR, Lafon S (2006) Diffusion maps. Appl Comput Harmon Anal 21:5–30
Coifman RR, Maggioni M (2006) Diffusion wavelets in special issue on diffusion maps and wavelets. Appl Comput Harmon Anal 21:53–94
Cox TF, Cox MA (2004) Multidimensional scaling. Chapman & Hall, Landon
Donoho D, Grimes C (2003) Hessian eigenmaps: new locall linear embedding techniques for high-dimensional data. Proc Natl Acad Sci 100:5591–5596
Gu M, Eisenstat SC (1996) Efficient algorithms for computing a strong rank-revealing QR factorization. SIAM J Sci Comput 17:848–869
Kumar V, Grama A, Gupta A, Karypis G (1994) Introduction to paralell computing, design and analysis of algorithms. Benjamin/Cummings, Redwood City
Lafon S (2004) Diffusion maps and geometric harmonics, PhD dissertation, Yale University
Laub J, Müller KR (2004) Feature discovery in non-metric pairwise data. J Mach Learn Res 5:801–818
Law MHC, Jain AK (2006) Incremental nonlinear dimensionality reduction by manifold learning. IEEE Trans Pattern Anal Mach Intell 28:377–391
Lee JA, Verleysen M (2007) Nonlinear dimensionality reduction. Springer, New York
Li CK, Li RC, Ye Q (2007) Eigenvalues of an alignment matrix in nonlinear manifold learning. Commun Math Sci 5:313–329
Lin T, Zha HY, Lee S (2006) Riemannian manifold learning for nonliear dimensionality reduction. In: European conference on computer vision, Graz, pp 44–55
Nadler B, Lafon S, Coifman RR, Kevrekidis IG (2006) Diffusion maps, spectral clustering and the reaction coordinates of dynamical systems. Appl Comput Harm Anal 21:113–127
Park J, Zhang ZY, Zha HY, Kasturi R (2004) Local smoothing for manifold learning. Comput Vis Pattern Recogn 2:452–459
Partridge M, Calvo R (1997) Fast dimensionality reduction and simple PCA. Intell Data Anal 2:292–298
Rao C, Rao M (1998) Matrix algebra and its applications to statistics and econometric. World Scientific, Singapore
Roweis ST, Saul LK (2000) Nonlinear dimensionality reduction by locally linear embedding. Science 260:2323–2326
Szlam A (2006) Non-stationary analysis on datasets and applications, PhD dissertation, Yale University
Tenenbaum JB, de Silva V, Langford JC (2000) A global geometric framwork for nonlinear dimensionality reduction. Science 290:2319–2323
Torgerson WS (1958) Theory and methods of scaling. Wiley, New York
Weinberger KQ, Packer BD, Saul LK (2005) Nonlinear dimensionality reduction by semi-definite programming and kernel matrix factorization. In: Proceedings of the 10th international workshop on AI and statistics, Barbados
Woolfe F, Liberty E, Rokhlin V, Tygert M (2008) A randomized algorithm for the approximation of matrices. Appl Comput Harmon Anal 25:335–366
Young G, Householder AS (1938) Discussion of a set of points in term of their mutual distances. Psychometrika 3:19–22
Zha HY, Zhang ZY (2009) Spectral properties of the alignment matrices in manifold learning. SIAM Rev 51:546–566
Zhang ZY, Zha HY (2003) Nonlinear dimension reduction via local tangent space alignment. Intell Data Eng Autom Learn 25:477–481
Zhang ZY, Zha HY (2005) Principal manifolds and nonlinear dimensionality reduction via local tangent space alignment. SIAM J Sci Comput 26:313–338
Zhao D (2006) Formulating LLE using alignment technique. Pattern Recogn 39:2233–2235
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2013 Springer-Verlag Berlin Heidelberg
About this entry
Cite this entry
K.Chui, C., Wang, J. (2013). Nonlinear Methods for Dimensionality Reduction. In: Freeden, W., Nashed, M., Sonar, T. (eds) Handbook of Geomathematics. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-27793-1_34-2
Download citation
DOI: https://doi.org/10.1007/978-3-642-27793-1_34-2
Received:
Accepted:
Published:
Publisher Name: Springer, Berlin, Heidelberg
Online ISBN: 978-3-642-27793-1
eBook Packages: Springer Reference MathematicsReference Module Computer Science and Engineering
Publish with us
Chapter history
-
Latest
Nonlinear Methods for Dimensionality Reduction- Published:
- 19 February 2015
DOI: https://doi.org/10.1007/978-3-642-27793-1_34-3
-
Original
Nonlinear Methods for Dimensionality Reduction- Published:
- 08 October 2014
DOI: https://doi.org/10.1007/978-3-642-27793-1_34-2