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Symmetry in DNA: Methods of Pattern Recognition Based on Hidden Markov Models

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Optimization Methods and Applications

Part of the book series: Springer Optimization and Its Applications ((SOIA,volume 130))

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Abstract

Fundamental relations and symmetry rules of the genetic information organization in DNA were studied. DNA symmetry was used to construct an optimal symmetric code with respect to amino acid polarity, with noise immunity much higher than that of a standard genetic code. It is well known that various diseases are associated with pointwise mutations of nucleotides in genes. Bayesian procedures allow for use of the standard and symmetric codes for genetic diseases diagnosis. Markov model of higher orders with hidden states was used to build simple algorithms for gene fragment prediction.

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Correspondence to Anatoliy M. Gupal .

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Biletskyy, B.O., Gupal, A.M. (2017). Symmetry in DNA: Methods of Pattern Recognition Based on Hidden Markov Models. In: Butenko, S., Pardalos, P., Shylo, V. (eds) Optimization Methods and Applications . Springer Optimization and Its Applications, vol 130. Springer, Cham. https://doi.org/10.1007/978-3-319-68640-0_2

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