Abstract
Cell detection is the essential step for various analyses in biological fields. One of the conventional approach is to construct a specialized method for every specified task, but it is not efficient in the meaning of the coding workload. Another approach is based on some machine learning technique, but it is difficult to prepare many training data. To solve these problems, we propose a balanced system by combining image processing and machine learning. The system is universally applicable to any image, because it only consists of basic methods of image processing. The code of the system does not need to be modified, because its behavior is adaptively tuned by machine learning. Users are free from excessive request of training data, because only a few desirable data is specifically requested by the system. The system consists of three units to achieve functionalities for avoiding parameter collision, compensating lack of training data, and reducing complexity of feature space. The effectiveness of the system is evaluated with a typical set of cell images, and the result is sufficient. The proposed system provides a reasonable way of preparing a tuned cell detection method for arbitrary sets of images in this field.
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References
Li, K., Kanade, T.: Nonnegative mixed-norm preconditioning for microscopy image segmentation. In: Prince, J.L., Pham, D.L., Myers, K.J. (eds.) IPMI 2009. LNCS, vol. 5636, pp. 362–373. Springer, Heidelberg (2009). doi:10.1007/978-3-642-02498-6_30
Yin, Z., Li, K., Kanade, T., Chen, M.: Understanding the optics to aid microscopy image segmentation. In: Jiang, T., Navab, N., Pluim, J.P.W., Viergever, M.A. (eds.) MICCAI 2010. LNCS, vol. 6361, pp. 209–217. Springer, Heidelberg (2010). doi:10.1007/978-3-642-15705-9_26
Chen, T., Chefd’hotel, C.: Deep learning based automatic immune cell detection for immunohistochemistry images. In: Wu, G., Zhang, D., Zhou, L. (eds.) MLMI 2014. LNCS, vol. 8679, pp. 17–24. Springer, Cham (2014). doi:10.1007/978-3-319-10581-9_3
Dong, B., Shao, L., Da Costa, M., Bandmann, O., Frangi, A.: Deep learning for automatic cell detection in wide-field microscopy Zebrafish images. In: Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, pp. 772–776 (2015)
Li, Y., Paluri, M., Rehg, J.M., Dollár, P.: Unsupervised learning of edges. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 1619–1627 (2016)
Vinyals, O., Blundell, C., Lillicrap, T., Wierstra, D.: Matching networks for one shot learning. In: Advances in Neural Information Processing Systems, pp. 3630–3638 (2016)
Crammer, K., Kulesza, A., Dredze, M.: Adaptive regularization of weight vectors. In: Advances in Neural Information Processing Systems, pp. 414–422 (2009)
Wang, J., Zhao, P., Hoi, S.C.: Exact soft confidence-weighted learning. In: Proceedings of the 29th International Conference on Machine Learning (2012)
Serra, J.: Image Analysis and Mathematical Morphology, vol. 1. Academic press, London (1982)
Canny, J.: A computational approach to edge detection. IEEE Trans. Pattern Anal. Mach. Intell. 6, 679–698 (1986)
Lowe, D.G.: Object recognition from local scale-invariant features. In: Proceedings of the 7th IEEE International Conference on Computer Vision, vol. 2, pp. 1150–1157 (1999)
Dalal, N., Triggs, B.: Histograms of oriented gradients for human detection. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, vol. 1, pp. 886–893 (2005)
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Maeda, Y., Endo, Y., Sanami, S. (2017). On Cell Detection System with User Interaction. In: Torra, V., Narukawa, Y., Honda, A., Inoue, S. (eds) Modeling Decisions for Artificial Intelligence. MDAI 2017. Lecture Notes in Computer Science(), vol 10571. Springer, Cham. https://doi.org/10.1007/978-3-319-67422-3_17
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DOI: https://doi.org/10.1007/978-3-319-67422-3_17
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