Skip to main content

Brain Tumor Segmantation Using Random Forest Trained on Iteratively Selected Patients

  • Conference paper
  • First Online:
Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries (BrainLes 2016)

Abstract

This paper extends a previously published brain tumor segmentation methods based on Random Decision Forest (RDF). An iterative approach is used in training the RDF in each iteration some patients are added to the training data using some heuristics approach instead of randomly selected training dataset. Feature extraction and selection were applied to select the most discriminative features for training our Random Decision forest on. The post-processing phase has a morphological filter to deal with misclassification errors. Our method is capable of detecting the tumor and segmenting the different tumorous tissues of the glioma achieving competitive results.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Tustison, N., Gee, J.: N4ITK: Nicks N3 ITK implementation for MRI bias field correction. Insight J. (2009)

    Google Scholar 

  2. Nyu, L.G., Udupa, J.K.: On standardizing the MR image intensity scale image, vol. 1081 (1999)

    Google Scholar 

  3. Nyu, L.G., Udupa, J.K.: New variants of a method of MRI scale standardization. IEEE Trans. Med. Imaging 19(2), 143–150 (2000)

    Article  Google Scholar 

  4. Dinis, H., Pinto, A., Pereira, S., Silva, C.A.: Random decision forests for automatic brain tumor segmentation in multi-modal MRI images

    Google Scholar 

  5. Peyrat, J.-M., Abinahed, J., Malmi, E., Parambath, S., Chawla, S.: CaBS: a cascaded brain tumor segmentation approach

    Google Scholar 

  6. Wilms, M., Maier, O., Handels, H.: Highly discriminative features for glioma segmentation in MR volumes with random forests

    Google Scholar 

  7. http://www.h2o.ai/

  8. Bauer, S., Wiest, R., Nolte, L.P., Reyes, M.: A survey of MRI-based medical image analysis for brain tumor studies. Phys. Med. Biol. 58(13), R97 (2013)

    Article  Google Scholar 

  9. Menze, B., et al.: The multimodal brain tumor image segmentation benchmark (BRATS). IEEE Trans. Med. Imaging (2014)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Abdelrahman Ellwaa .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing AG

About this paper

Cite this paper

Ellwaa, A. et al. (2016). Brain Tumor Segmantation Using Random Forest Trained on Iteratively Selected Patients. In: Crimi, A., Menze, B., Maier, O., Reyes, M., Winzeck, S., Handels, H. (eds) Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries. BrainLes 2016. Lecture Notes in Computer Science(), vol 10154. Springer, Cham. https://doi.org/10.1007/978-3-319-55524-9_13

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-55524-9_13

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-55523-2

  • Online ISBN: 978-3-319-55524-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics