Skip to main content

Noise Sensitivity of an Information Granules Filtering Procedure by Genetic Optimization for Inexact Sequential Pattern Mining

  • Conference paper
  • First Online:
Computational Intelligence (IJCCI 2014)

Part of the book series: Studies in Computational Intelligence ((SCI,volume 620))

Included in the following conference series:

Abstract

One of the most essential challenges in Data Mining and Knowledge Discovery is the development of effective tools able to find regularities in data. In order to highlight and to extract interesting knowledge from the data at hand, a key problem is frequent pattern mining, i.e. to discover frequent substructures hidden in the available data. In many interesting application fields, data are often represented and stored as sequences over time or space of generic objects. Due to the presence of noise and uncertainties in data, searching for frequent subsequences must employ approximate matching techniques, such as edit distances. A common procedure to identify recurrent patterns in noisy data is based on clustering algorithms relying on some edit distance between subsequences. However, this plain approach can produce many spurious patterns due to multiple pattern matchings on close positions in the same sequence excerpt. In this paper, we present a method to overcome this drawback by applying an optimization-based step lter that identifies the most descriptive patterns among those found by the clustering process, and allows to return more compact and easily interpretable clusters. We evaluate the mining systems performances on synthetic data in two separate cases, corresponding respectively to two different (simulated) sources of noise. In both cases, our method performs well in retrieving the original patterns with acceptable information loss.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Notes

  1. 1.

    The subscript “e” stands for “extraction” as in extraction step.

References

  1. Possemato, F., Rizzi, A.: Automatic text categorization by a granular computing approach: facing unbalanced data sets. In: The 2013 International Joint Conference on Neural Networks (IJCNN), pp. 1–8 (2013)

    Google Scholar 

  2. Modugno, V., Possemato, F., Rizzi, A.: Combining piecewise linear regression and a granular computing framework for financial time series classification (2014)

    Google Scholar 

  3. Bianchi, F., Livi, L., Rizzi, A., Sadeghian, A.: A granular computing approach to the design of optimized graph classification systems. Soft Comput. 18, 393–412 (2014)

    Article  Google Scholar 

  4. Bianchi, F.M., Scardapane, S., Livi, L., Uncini, A., Rizzi, A.: An interpretable graph-based image classifier. In: 2014 International Joint Conference on Neural Networks (IJCNN), pp. 2339–2346. IEEE (2014)

    Google Scholar 

  5. Rizzi, A., Del Vescovo, G.: Automatic image classification by a granular computing approach. In: Proceedings of the 2006 16th IEEE Signal Processing Society Workshop on Machine Learning for Signal Processing, pp. 33–38 (2006)

    Google Scholar 

  6. Del Vescovo, G., Rizzi, A.: Automatic classification of graphs by symbolic histograms. In: IEEE International Conference on Granular Computing. GRC 2007, pp. 410–410 (2007)

    Google Scholar 

  7. Del Vescovo, G., Rizzi, A.: Online handwriting recognition by the symbolic histograms approach. In: IEEE International Conference on Granular Computing. GRC 2007, pp. 686–686 (2007)

    Google Scholar 

  8. Bargiela, A., Pedrycz, W.: Granular Computing: An Introduction. Springer (2003)

    Google Scholar 

  9. Livi, L., Rizzi, A., Sadeghian, A.: Granular modeling and computing approaches for intelligent analysis of non-geometric data. Appl. Soft Comput. 27, 567–574 (2015)

    Article  Google Scholar 

  10. Agrawal, R., Srikant, R.: Mining sequential patterns. In: Proceedings of the Eleventh International Conference on Data Engineering, pp. 3–14. IEEE (1995)

    Google Scholar 

  11. Agrawal, R., Imieliński, T., Swami, A.: Mining association rules between sets of items in large databases. In: ACM SIGMOD Record, vol. 22, pp. 207–216. ACM (1993)

    Google Scholar 

  12. Rajaraman, A., Ullman, J.D.: Mining of Massive Datasets. Cambridge University Press, New York (2011)

    Book  Google Scholar 

  13. Srikant, R., Agrawal, R.: Mining Sequential Patterns: Generalizations and Performance Improvements. Springer (1996)

    Google Scholar 

  14. Zaki, M.J.: Spade: an efficient algorithm for mining frequent sequences. Mach. Learn. 42, 31–60 (2001)

    Google Scholar 

  15. Han, J., Pei, J., Mortazavi-Asl, B., Chen, Q., Dayal, U., Hsu, M.C.: Freespan: frequent pattern-projected sequential pattern mining. In: Proceedings of the Sixth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, ACM, pp. 355–359 (2000)

    Google Scholar 

  16. Pei, J., Han, J., Mortazavi-Asl, B., Pinto, H., Chen, Q., Dayal, U., Hsu, M.C.: Prefixspan: mining sequential patterns efficiently by prefix-projected pattern growth. In: 2013 IEEE 29th International Conference on Data Engineering (ICDE), IEEE Computer Society, pp. 0215–0215 (2001)

    Google Scholar 

  17. Sinha, S., Tompa, M.: YMF: a program for discovery of novel transcription factor binding sites by statistical overrepresentation. Nucleic Acids Res. 31, 3586–3588 (2003)

    Article  Google Scholar 

  18. Pavesi, G., Mereghetti, P., Mauri, G., Pesole, G.: Weeder web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes. Nucleic Acids Res. 32, W199–W203 (2004)

    Article  Google Scholar 

  19. Eskin, E., Pevzner, P.A.: Finding composite regulatory patterns in dna sequences. Bioinformatics 18, S354–S363 (2002)

    Article  Google Scholar 

  20. Buhler, J., Tompa, M.: Finding motifs using random projections. J. Comput. Biol. 9, 225–242 (2002)

    Article  Google Scholar 

  21. Zhu, F., Yan, X., Han, J., Yu, P.S.: Efficient discovery of frequent approximate sequential patterns. In: Seventh IEEE International Conference on Data Mining. ICDM 2007, pp. 751–756. IEEE (2007)

    Google Scholar 

  22. Ji, X., Bailey, J.: An efficient technique for mining approximately frequent substring patterns. In: Seventh IEEE International Conference on Data Mining Workshops. ICDM Workshops 2007, pp. 325–330. IEEE (2007)

    Google Scholar 

  23. Rizzi, A., Possemato, F., Livi, L., Sebastiani, A., Giuliani, A., Mascioli, F.M.F.: A dissimilarity-based classifier for generalized sequences by a granular computing approach. In: IJCNN, IEEE, pp. 1–8 (2013)

    Google Scholar 

  24. Zhu, F., Yan, X., Han, J., Yu, P.S.: Efficient discovery of frequent approximate sequential patterns. In: Proceedings of the 2007 Seventh IEEE International Conference on Data Mining, Washington, DC, USA, IEEE Computer Society, pp. 751–756 (2007)

    Google Scholar 

  25. Ji, X., Bailey, J.: An efficient technique for mining approximately frequent substring patterns. In: Proceedings of the Seventh IEEE International Conference on Data Mining Workshops. ICDMW ’07, Washington, DC, USA, IEEE Computer Society, pp. 325–330 (2007)

    Google Scholar 

  26. Fu, A.W.C., Keogh, E., Lau, L.Y., Ratanamahatana, C.A., Wong, R.C.W.: Scaling and time warping in time series querying. VLDB J. Int. J. Very Large Data Bases 17, 899–921 (2008)

    Article  Google Scholar 

  27. Vlachos, M., Kollios, G., Gunopulos, D.: Discovering similar multidimensional trajectories. In: 18th International Conference on Data Engineering. Proceedings. IEEE, pp. 673–684 (2002)

    Google Scholar 

  28. Patel, P., Keogh, E., Lin, J., Lonardi, S.: Mining motifs in massive time series databases. In: 2002 IEEE International Conference on Data Mining. ICDM 2003. Proceedings. IEEE, pp. 370–377 (2002)

    Google Scholar 

  29. Chiu, B., Keogh, E., Lonardi, S.: Probabilistic discovery of time series motifs. In: Proceedings of the Ninth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, ACM, pp. 493–498 (2003)

    Google Scholar 

  30. Floratou, A., Tata, S., Patel, J.M.: Efficient and accurate discovery of patterns in sequence data sets. IEEE Trans. Knowl. Data Eng. 23, 1154–1168 (2011)

    Article  Google Scholar 

  31. Matsui, T., Uno, T., Umemori, J., Koide, T.: A new approach to string pattern mining with approximate match. In: Discovery Science, pp. 110–125. Springer (2013)

    Google Scholar 

  32. Maiorino, E., Possemato, F., Modugno, V., Rizzi, A.: Information granules filtering for inexact sequential pattern mining by evolutionary computation (2014)

    Google Scholar 

  33. Rizzi, A., Del Vescovo, G., Livi, L., Frattale Mascioli, F.M.: A new granular computing approach for sequences representation and classification. In: Proceedings of the 2012 International Joint Conference on Neural Networks, pp. 2268–2275 (2012)

    Google Scholar 

  34. Del Vescovo, G., Livi, L., Frattale Mascioli, M., Rizzi, A.: On the problem of modeling structured data with the minsod representative. Int. J. Comput. Theory Eng. 6, 9–14 (2014)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Enrico Maiorino .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing Switzerland

About this paper

Cite this paper

Maiorino, E., Possemato, F., Modugno, V., Rizzi, A. (2016). Noise Sensitivity of an Information Granules Filtering Procedure by Genetic Optimization for Inexact Sequential Pattern Mining. In: Merelo, J.J., Rosa, A., Cadenas, J.M., Dourado, A., Madani, K., Filipe, J. (eds) Computational Intelligence. IJCCI 2014. Studies in Computational Intelligence, vol 620. Springer, Cham. https://doi.org/10.1007/978-3-319-26393-9_9

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-26393-9_9

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-26391-5

  • Online ISBN: 978-3-319-26393-9

  • eBook Packages: EngineeringEngineering (R0)

Publish with us

Policies and ethics