Skip to main content

Modeling of Biological Systems: From Algebra to Calculus and Computer Simulations

  • Chapter
  • First Online:
Mathematics Research for the Beginning Student, Volume 1

Abstract

In this chapter we present a survey of mathematical modeling approaches to biological problems. We approach the modeling efforts through several mathematical techniques: from basic algebra, already studied in middle- and high school, to calculus, at the transition of high school and college. Throughout the chapter, we rely heavily on computer simulation techniques with which we investigate different aspects of these models and their relationships with the studies systems, illustrating the modern approach of computational thinking. We have presented versions of these problems and models in our own courses in mathematics for non-majors, targeted to first- and second-year colleges students who are interested in biology and life sciences. Many students have told us that they found the approach engaging and that it increased their appreciation of mathematics as an applied science. The problems and project that you will see here are selected from areas of population biology (populations of squirrels, insects, flies, and wasps); use of medical sensing and modeling to detect the blood pressure and heartbeat in patients; and epidemiology, modeling the spread of infectious diseases, from Ebola in West Africa, with an option to study the COVID pandemic in 2020–2021.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 69.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

Notes

  1. 1.

    Even though graphs look continuous in time they are composed of many solutions corresponding to discrete time steps.

References

  1. G. Polya. How to solve it. Princeton University Press, 1945.

    Book  MATH  Google Scholar 

  2. K. K. Bliss, F. K. Fowler, and B. J. Galluzzo. Math Modeling: Getting Started and Getting Solutions. SIAM, Philadelphia, 2014.

    Google Scholar 

  3. S. Buyting. Women and science suffer when medical research doesn’t study females. https://www.cbc.ca/radio/quirks/july-25-2020-women-in-science-special-how-science-has-done-women-wrong-1.5291077/women-and-science-suffer-when-medical-research-doesn-t-study-females-1.5291080, 2019. Accessed: 2021-02-07.

  4. Code files for the chapter. https://github.com/adimitr/ModelingBioChapter. Accessed: 2021-06-30.

  5. Matlab:. https://www.mathworks.com/products/matlab.html. Accessed: 2021-01-30.

  6. GNU Octave:. https://www.gnu.org/software/octave/index. Accessed: 2021-01-30.

  7. Python:. https://www.python.org/. Accessed: 2021-01-31.

  8. Jupyter notebook:. https://jupyter.org/. Accessed: 2021-01-31.

  9. Matlab onramp:. https://www.mathworks.com/learn/tutorials/matlab-onramp.html. Accessed: 2021-01-31.

  10. Octave tutorials:. https://wiki.octave.org/Video_tutorials. Accessed: 2021-01-31.

  11. S Freeman, SL Eddy, M McDonough, M Smith, N Okoroafora, H Jordt, and MP Wenderoth. Active learning increases student performance in science, engineering, and mathematics. Proceedings of the National Academy of Sciences, 11(3):8410–8415, 2014.

    Article  Google Scholar 

  12. I Starr and A Noordergraaf. Ballistocardiography in cardiovascular research: Physical aspects of the circulation in health and disease. Lippincott, 1967.

    Google Scholar 

  13. G Guidoboni, L Sala, M Enayati, R Sacco, M Szopos, J Keller, M Popescu, L Despins, V Huxley, and M Skubic. Cardiovascular function and ballistocardiogram: a relationship interpreted via mathematical modeling. IEEE Transactions on Biomedical Engineering, 66(10):2906–2917, 2019.

    Article  Google Scholar 

  14. D Kincaid and W Cheney. Numerical Analysis: Mathematics of Scientific Computing. American Mathematical Society, 2002.

    MATH  Google Scholar 

  15. JR Hanly and EB Koffman. Problem solving and program design in C. Pearson, New Jersey, 2018.

    MATH  Google Scholar 

  16. DN Arnold. The patriot missile failure. http://www-users.math.umn.edu/~arnold//disasters/patriot.html, 2000. Accessed: 2021-02-02.

  17. RB Schmid, A Knutson, KL Giles, and BP Mcornack. Hessian fly (Diptera: Cecidomyiidae) biology and management in wheat. Journal of Integrated Pest Management, 9(1), 2018.

    Google Scholar 

  18. Roe K. Tolerance as a novel mechanism of hessian fly control on wheat. Master’s thesis, Purdue University, 2016.

    Google Scholar 

  19. CM Packard. Life histories and methods of rearing hessian-fly parasites. Journal of Agricultural Research, 6(10):367–381, 1916.

    Google Scholar 

  20. P Oliver and D Myers. The coevolution of social movements. Mobilization, 8:1–25, 2003.

    Article  Google Scholar 

  21. D Felmlee and D Greenberg. A dynamic systems model of dyadic interaction. Journal of Mathematical Sociology, 23(3):155–180, 1999.

    Article  MATH  Google Scholar 

  22. SIMIODE modeling scenarios. https://www.simiode.org/resources/modelingscenarios. Accessed: 2021-01-30.

  23. T.R. Malthus. An Essay on the Principle of Population As It Affects the Future Improvement of Society, with Remarks on the Speculations of Mr. Goodwin, M. Condorcet and Other Writers. J. Johnson in St. Paul’s Churchyard, London, 1798. https://archive.org/details/essayonprincipl00malt, Accessed: 2021-01-30.

  24. P.-F. Verhulst. Recherches mathématiques sur la loi d’accroissement de la population. Nouveaux Mémoires de l’Académie Royale des Sciences et Belles-Lettres de Bruxelles, 18:1 – 38, 1845.

    Google Scholar 

  25. McKendrick A. G. and Pai M. K. XLV.—the rate of multiplication of micro-organisms: A mathematical study. Proceedings of the Royal Society of Edinburgh, 31:649 – 653, 1912.

    Google Scholar 

  26. World Health Organization. Ebola virus disease. http://www.who.int/mediacentre/factsheets/fs103/en/. Accessed: 2021-02-05.

  27. The covid tracking project:. https://covidtracking.com/. Accessed: 2021-02-05.

  28. Ensheng Dong, Hongru Du, and Lauren Gardner. An interactive web-based dashboard to track covid-19 in real time. The Lancet Infectious Diseases, 20:533–534, 5 2020.

    Google Scholar 

  29. M. D. Roberts, H. D. Seymour, and A. Dimitrov. Increasing number of hospital beds has inconsistent effects on delaying bed shortages due to COVID-19. SIAM Undergraduate Research Online, 2021.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Alexander Dimitrov .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2022 The Author(s), under exclusive license to Springer Nature Switzerland AG

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Dimitrov, A. et al. (2022). Modeling of Biological Systems: From Algebra to Calculus and Computer Simulations. In: Goldwyn, E.E., Ganzell, S., Wootton, A. (eds) Mathematics Research for the Beginning Student, Volume 1. Foundations for Undergraduate Research in Mathematics. Birkhäuser, Cham. https://doi.org/10.1007/978-3-031-08560-4_7

Download citation

Publish with us

Policies and ethics