Skip to main content

Compositional Data Analysis in Physical Activity and Health Research. Looking for the Right Balance

  • Chapter
  • First Online:
Advances in Compositional Data Analysis

Abstract

The time spent in different types of sleep, sedentary behaviour and physical activity during a day represents compositional data. Previous use of compositional analysis of daily activity data through orthonormal log-ratio coordinates in the form of pivot coordinates of four components (sleep, sedentary behaviour, light physical activity, moderate to vigorous physical activity) has facilitated critical comparison with and the resolution of contradicting reports of the influence of daily behaviour on health which had arisen from the use of standard statistical analysis. For example, there has been a long-standing debate about whether the effects of time spent sedentary are independent of the time spent in moderate to vigorous activity. However, daily activity may be usefully broken down into more categories, and other compositional analysis approaches may be relevant. Here we demonstrate the use of log-ratio balances to evaluate the association between daily activity broken into six components (sleep, short periods of sedentary behaviour, long periods of sedentary behaviour, standing, slow walking and fast walking) from a nationally representative sample of adults with health markers in obesity, lipidemia and glycemia. The balanced approach to compositional analysis of daily behaviour patterns offers a way to focus the statistical assessment and modelling on variables, representing meaningful contrasts of interest between behaviours. This is fully consistent with the view that actual effects on health are associated with exchanges between some classes of daily behaviours.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 149.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 199.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 199.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • J. Aitchison, The Statistical Analysis of Compositional Data (Chapman and Hall, New York, 1986).

    Book  Google Scholar 

  • C. Barcelo-Vidal, J.-A. Martín-Fernández, The mathematics of compositional analysis. Austrian J. Stat. 45, 57 (2016). https://doi.org/10.17713/ajs.v45i4.142

  • A. Biswas, P.I. Oh, G.E. Faulkner, R.R. Bajaj, M.A. Silver, M.S. Mitchell, D.A. Alter, Sedentary time and its association with risk for disease incidence, mortality, and hospitalization in adults. Ann. Intern. Med. 162, 123 (2015). https://doi.org/10.7326/M14-1651

    Article  Google Scholar 

  • S.N. Blair, G. Davey Smith, I.M. Lee, K. Fox, M. Hillsdon, R.E. McKeown, W.L. Haskell, M. Marmot, A tribute to Professor Jeremiah Morris: the man who invented the field of physical activity epidemiology. Ann. Epidemiol. 20, 651–660 (2010). https://doi.org/10.1016/j.annepidem.2010.06.001

    Article  Google Scholar 

  • M.P. Buman, E.A.H. Winkler, J.M. Kurka, E.B. Hekler, C.M. Baldwin, N. Owen, B.E. Ainsworth, G.N. Healy, P.A. Gardiner, Reallocating time to sleep, sedentary behaviors, or active behaviors: associations with cardiovascular disease risk biomarkers, NHANES 2005–2006. Am. J. Epidemiol. 179, 323–334 (2014). https://doi.org/10.1093/aje/kwt292

    Article  Google Scholar 

  • F.P. Cappuccio, F.M. Taggart, N.-B. Kandala, A. Currie, E. Peile, S. Stranges, M.A. Miller, Meta-analysis of short sleep duration and obesity in children and adults. Sleep 31, 619–626 (2008). https://doi.org/10.1093/sleep/31.5.619

    Article  Google Scholar 

  • V. Carson, M.S. Tremblay, J.-P. Chaput, S.F.M. Chastin, Associations between sleep duration, sedentary time, physical activity, and health indicators among Canadian children and youth using compositional analyses1. Appl. Physiol. Nutr. Metab. 41, S294–S302 (2016). https://doi.org/10.1139/apnm-2016-0026

    Article  Google Scholar 

  • J.-P. Chaput, V. Carson, C.E. Gray, M.S. Tremblay, Importance of all movement behaviors in a 24 hour period for overall health. Int. J. Environ. Res. Public Health 11, 12575–12581 (2014). https://doi.org/10.3390/ijerph111212575

    Article  Google Scholar 

  • S.F.M. Chastin, T. Egerton, C. Leask, E. Stamatakis, Meta-analysis of the relationship between breaks in sedentary behavior and cardiometabolic health. Obesity 23, 1800–1810 (2015a). https://doi.org/10.1002/oby.21180

  • S.F.M. Chastin, J. Palarea-Albaladejo, M.L. Dontje, D.A. Skelton, Combined effects of time spent in physical activity, sedentary behaviors and sleep on obesity and cardio-metabolic health markers: a novel compositional data analysis approach. PLoS ONE (2015b). https://doi.org/10.1371/journal.pone.0139984

  • S.R. Colberg, R.J. Sigal, J.E. Yardley, M.C. Riddell, D.W. Dunstan, P.C. Dempsey, E.S. Horton, K. Castorino, D.F. Tate, Physical activity/exercise and diabetes: a position statement of the American diabetes association. Diabetes Care 39, 2065–2079 (2016). https://doi.org/10.2337/dc16-1728

    Article  Google Scholar 

  • G. Condello, F.C.M. Ling, A. Bianco, S. Chastin, G. Cardon, D. Ciarapica, D. Conte, C. Cortis, M. De Craemer, A. Di Blasio, M. Gjaka, S. Hansen, M. Holdsworth, L. Iacoviello, P. Izzicupo, L. Jaeschke, L. Leone, L. Manoni, C. Menescardi, S. Migliaccio, J.-A. Nazare, C. Perchoux, C. Pesce, F. Pierik, T. Pischon, A. Polito, A. Puggina, A. Sannella, W. Schlicht, H. Schulz, C. Simon, A. Steinbrecher, C. MacDonncha, L. Capranica, DEDIPAC consortium, Using concept mapping in the development of the EU-PAD framework (European-physical activity determinants across the life course): a DEDIPAC-study. BMC Public Health 16, 1145 (2016). https://doi.org/10.1186/s12889-016-3800-8

  • C.B. del Pozo, R.M. Alfonso-Rosa, D. McGregor, S.F. Chastin, J. Palarea-Albaladejo, C.J. del Pozo, Sedentary behaviour is associated with depression symptoms: compositional data analysis from a representative sample of 3233 US adults and older adults assessed with accelerometers. J. Affect. Disord. (2020). https://doi.org/10.1016/j.jad.2020.01.023

    Article  Google Scholar 

  • Department of Health, Start active, stay active: a report on physical activity from the four home countries’ Chief Medical Officers (2011)

    Google Scholar 

  • D. Dumuid, T. Olds, L.K. Lewis, J.A. Martin-Fernández, T. Barreira, S. Broyles, J.-P. Chaput, M. Fogelholm, G. Hu, R. Kuriyan, A. Kurpad, E.V. Lambert, J. Maia, V. Matsudo, V.O. Onywera, O.L. Sarmiento, M. Standage, M.S. Tremblay, C. Tudor-Locke, P. Zhao, P. Katzmarzyk, F. Gillison, C. Maher, The adiposity of children is associated with their lifestyle behaviours: a cluster analysis of school-aged children from 12 nations. Pediatr. Obes. 13, 111–119 (2018). https://doi.org/10.1111/ijpo.12196

    Article  Google Scholar 

  • J.J. Egozcue, V. Pawlowsky-Glahn, Groups of parts and their balances in compositional data analysis. Math. Geol. 37, 795–828 (2005). https://doi.org/10.1007/s11004-005-7381-9

    Article  MathSciNet  MATH  Google Scholar 

  • U. Ekelund, J. Steene-Johannessen, W.J. Brown, M.W. Fagerland, N. Owen, K.E. Powell, A. Bauman, I.-M. Lee, J. Morris, J. Heady, P. Raffle, C. Roberts, J. Parks, R. Paffenbarger, R. Hyde, A. Wing, C. Hsieh, C. Wen, J. Wai, M. Tsai, I. Lee, E. Shiroma, F. Lobelo, P. Puska, S. Blair, P. Katzmarzyk, LPASW Group, C. Matthews, K. Chen, P. Freedson, B. Hansen, E. Kolle, S. Dyrstad, I. Holme, S. Anderssen, A. Grøntved, F. Hu, J. Chau, A. Grunseit, T. Chey, A. Biswas, P. Oh, G. Faulkner, S. Carlsson, T. Andersson, A. Wolk, A. Ahlbom, K. Ensrud, T. Blackwell, J. Cauley, Group of in MS, P. Katzmarzyk, M. Inoue, H. Iso, S. Yamamoto, A. Patel, L. Bernstein, A. Deka, C. Matthews, S. George, S. Moore, H. van der Ploeg, T. Chey, R. Korda, E. Banks, A. Bauman, T. Pavey, G. Peeters, W. Brown, L. Leon-Munoz, D. Martinez-Gomez, T. Balboa-Castillo, E. Lopez-Garcia, P. Guallar-Castillon, F. Rodriguez-Artalejo, Y. Kim, L. Wilkens, S. Park, M. Goodman, K. Monroe, L. Kolonel, C. Petersen, A. Bauman, M. Gronbaek, J. Helge, L. Thygesen, J. Tolstrup, C. Matthews, S. Cohen, J. Fowke, D. Dunstan, E. Barr, G. Healy, K. Wijndaele, S. Brage, H. Besson, E. Ford, R. Seguin, D. Buchner, J. Liu, T. Jørgensen, K. Borch-Johnsen, T. Thomsen, H. Ibsen, C. Glümer, C. Pisinger, S. Krokstad, A. Langhammer, K. Hveem, B. Ainsworth, W. Haskell, S. Herrmann, L. Kmet, R. Lee, L. Cook, J. Tierney, L. Stewart, D. Ghersi, S. Burdett, M. Sydes, J. Sterne, M. Egger, WHO, H. Arem, S. Moore, A. Patel, M. Schumacher, G. Rücker, G. Schwarzer, P.S. Collaboration, F. Benatti, M. Reid-Larsen, G. Frydenlund, T. Jorgensen, U. Toft, C. Pisinger, M. Aadahl, J. Harris J. Bargh, K. Brownell, I. Kim, S. Park, J. Trombold, E. Coyle, J. van Dijk, M. Venema, W. van Mechelen, C. Stehouwer, F. Hartgens, L. van Loon, Does physical activity attenuate, or even eliminate, the detrimental association of sitting time with mortality? A harmonised meta-analysis of data from more than 1 million men and women. Lancet 388, 1302–1310 (2016). https://doi.org/10.1016/S0140-6736(16)30370-1

  • P. Filzmoser, K. Hron, C. Reimann, Univariate statistical analysis of environmental (compositional) data: problems and possibilities. Sci. Total Environ. 407, 6100–6108 (2009). https://doi.org/10.1016/j.scitotenv.2009.08.008

    Article  Google Scholar 

  • P. Filzmoser, K. Hron, C. Reimann, The bivariate statistical analysis of environmental (compositional) data. Sci. Total Environ. 408, 4230–4238 (2010). https://doi.org/10.1016/j.scitotenv.2010.05.011

    Article  Google Scholar 

  • P. Filzmoser, M. Templ, K. Hronn, Applied compositional data analysis with worked examples in R (2018)

    Google Scholar 

  • L. Foley, D. Dumuid, A.J. Atkin, T. Olds, D. Ogilvie, Patterns of health behaviour associated with active travel: a compositional data analysis. Int. J. Behav. Nutr. Phys. Act. 15 (2018). https://doi.org/10.1186/s12966-018-0662-8

  • N. Gupta, S.E. Mathiassen, G. Mateu-Figueras, M. Heiden, D.M. Hallman, M.B. Jørgensen, A. Holtermann, A comparison of standard and compositional data analysis in studies addressing group differences in sedentary behavior and physical activity. Int. J. Behav. Nutr. Phys. Act. 15, 53 (2018). https://doi.org/10.1186/s12966-018-0685-1

    Article  Google Scholar 

  • R. Guthold, G.A. Stevens, L.M. Riley, F.C. Bull, Worldwide trends in insufficient physical activity from 2001 to 2016: a pooled analysis of 358 population-based surveys with 1·9 million participants. Lancet Glob. Heal. 6, e1077–e1086 (2018). https://doi.org/10.1016/S2214-109X(18)30357-7

    Article  Google Scholar 

  • G.N. Healy, E.A.H. Winkler, N. Owen, S. Anuradha, D.W. Dunstan, Replacing sitting time with standing or stepping: associations with cardio-metabolic risk biomarkers. Eur. Heart. J. 36, 2643–2649 (2015). https://doi.org/10.1093/eurheartj/ehv308

    Article  Google Scholar 

  • F.B. Hu, Sedentary lifestyle and risk of obesity and type 2 diabetes. Lipids 38, 103–108 (2003)

    Article  Google Scholar 

  • H.W. Kohl, C.L. Craig, E.V. Lambert, S. Inoue, J.R. Alkandari, G. Leetongin, S. Kahlmeier, The pandemic of physical inactivity: global action for public health. Lancet 380, 294–305 (2012)

    Google Scholar 

  • I.-M. Lee, E.J. Shiroma, F. Lobelo, P. Puska, S.N. Blair, P.T. Katzmarzyk, Effect of physical inactivity on major non-communicable diseases worldwide: an analysis of burden of disease and life expectancy. Lancet 380, 219–229 (2012). https://doi.org/10.1016/S0140-6736(12)61031-9

    Article  Google Scholar 

  • K. Lyden, D. John, P. Dall, M.H. Granat, Differentiating sitting and lying using a thigh-worn accelerometer. Med. Sci. Sport Exerc. 48, 742–747 (2016). https://doi.org/10.1249/MSS.0000000000000804

    Article  Google Scholar 

  • J.A. Martín-Fernández, J. Palarea-Albaladejo, R. Olea, Dealing with zeros, in Compositional Data Analysis: Theory and Applications, ed. by V. Pawlowsky-Glahn, A. Buccianti (Wiley, Chichester, 2011), pp. 43–58

    Google Scholar 

  • J.A. Martín-Fernández, V. Pawlowsky-Glahn, J.J. Egozcue, R. Tolosona-Delgado, Advances in principal balances for compositional data. Math. Geosci. (2018). https://doi.org/10.1007/s11004-017-9712-z

    Article  MathSciNet  MATH  Google Scholar 

  • D. McGregor, V. Carson, J. Palarea-Albaladejo, P. Dall, M. Tremblay, S. Chastin, D.E. McGregor, V. Carson, J. Palarea-Albaladejo, P.M. Dall, M.S. Tremblay, S.F.M. Chastin, Compositional analysis of the associations between 24-h movement behaviours and health indicators among adults and older adults from the Canadian health measure survey. Int. J. Environ. Res. Public Health 15, 1779 (2018). https://doi.org/10.3390/ijerph15081779

    Article  Google Scholar 

  • D. McGregor, J. Palarea-Albaladejo, P. Dall, K. Hron, S. Chastin, Cox regression survival analysis with compositional covariates: application to modelling mortality risk from 24-h physical activity patterns. Stat. Methods Med. Res. 29, 1447–1465 (2020). https://doi.org/10.1177/0962280219864125

    Article  MathSciNet  Google Scholar 

  • A.R. Memon, C. Vandelanotte, T. Olds, M.J. Duncan, G.E. Vincent, Research combining physical activity and sleep: a bibliometric analysis. Percept. Mot. Skills 127, 154–181 (2020). https://doi.org/10.1177/0031512519889780

    Article  Google Scholar 

  • J.N. Morris, J.A. Heady, P.A.B. Raffle, C.G. Roberts, J.W. Parks, Coronary heart-disease and physical activity of work. Lancet 262, 1111–1120 (1953). https://doi.org/10.1016/S0140-6736(53)91495-0

    Article  Google Scholar 

  • N. Owen, G.N. Healy, C.E. Matthews, D.W. Dunstan, Too much sitting: the population health science of sedentary behavior. Exerc. Sport Sci. Rev. 38, 105–113 (2010). https://doi.org/10.1097/JES.0b013e3181e373a2

    Article  Google Scholar 

  • J. Palarea-Albaladejo, J.A. Martín-Fernández, zCompositions—R package for multivariate imputation of left-censored data under a compositional approach. Chemom. Intell. Lab. Syst. 143, 85–96 (2015). https://doi.org/10.1016/j.chemolab.2015.02.019

    Article  Google Scholar 

  • V. Pawlowsky-Glahn, J. J. Egozcue, R. Tolosana-Delgado, Modeling and Analysis of Compositional Data (2015)

    Google Scholar 

  • K.L. Piercy, R.P. Troiano, R.M. Ballard, S.A. Carlson, J.E. Fulton, D.A. Galuska, S.M. George, R.D. Olson, The physical activity guidelines for Americans. JAMA 320, 2020–2028 (2018). https://doi.org/10.1001/jama.2018.14854

    Article  Google Scholar 

  • J. Rivera-Pinto, J.J. Egozcue, V. Pawlowsky-Glahn, R. Paredes, M. Noguera-Julian, M.L. Calle, Balances: a new perspective for microbiome analysis. mSystems (2018). https://doi.org/10.1128/msystems.00053-18

  • H. Rutter, N. Cavill, A. Bauman, F. Bull, Systems approaches to global and national physical activity plans. Bull. World Health Organ. 97, 162–165 (2019)

    Article  Google Scholar 

  • SMPB, International Society for the measurement of physical behaviour (2020), https://ismpb.org/

  • E. Stamatakis, U. Ekelund, D. Ding, M. Hamer, A.E. Bauman, I.M. Lee, Is the time right for quantitative public health guidelines on sitting? A narrative review of sedentary behaviour research paradigms and findings. Br. J. Sports Med. 53, 377–382 (2018). https://doi.org/10.1136/bjsports-2018-099131

    Article  Google Scholar 

  • M. Tremblay, S. Aubert, J. Barnes, T. Saunders, V. Carson, A.E.C. Latimer-Cheung, S, Altenburg T, Chinapaw M, , Sedentary behavior research network (SBRN)–terminology consensus project process and outcome. Int. J. Behav. Nutr. Phys. Act. 14, 75 (2017)

    Article  Google Scholar 

  • M.S. Tremblay, V. Carson, J.-P. Chaput, S. Connor Gorber, T. Dinh, M. Duggan, G. Faulkner, C.E. Gray, R. Gruber, K. Janson, I. Janssen, P.T. Katzmarzyk, M.E. Kho, A.E. Latimer-Cheung, C. LeBlanc, A.D. Okely, T. Olds, R.R. Pate, A. Phillips, V.J. Poitras, S. Rodenburg, M. Sampson, T.J. Saunders, J.A. Stone, G. Stratton, S.K. Weiss, L. Zehr, Canadian 24-hour movement guidelines for children and youth: an integration of physical activity, sedentary behaviour, and sleep1. Appl. Physiol. Nutr. Metab. 41, S311–S327 (2016). https://doi.org/10.1139/apnm-2016-0151

    Article  Google Scholar 

  • D. Vissers, W. Hens, J. Taeymans, J.P. Baeyens, J. Poortmans, L. Van Gaal, The effect of exercise on visceral adipose tissue in overweight adults: a systematic review and meta-analysis. PLoS ONE 8 (2013). https://doi.org/10.1371/journal.pone.0056415

  • D.E.R. Warburton, S. Charlesworth, A. Ivey, L. Nettlefold, S.S.D. Bredin, A systematic review of the evidence for Canada’s physical activity guidelines for adults. Int. J. Behav. Nutr. Phys. Act. 7, 39 (2010). https://doi.org/10.1186/1479-5868-7-39

    Article  Google Scholar 

  • N.F. Watson, M.S. Badr, G. Belenky, D.L. Bliwise, O.M. Buxton, D. Buysse, D.F. Dinges, J. Gangwisch, M.A. Grandner, C. Kushida, R.K. Malhotra, J.L. Martin, S.R. Patel, S.F. Quan, E. Tasali, E. Tasali, Recommended amount of sleep for a healthy adult: a joint consensus statement of the American academy of sleep medicine and sleep research society. Sleep 38, 843–844 (2015). https://doi.org/10.5665/sleep.4716

    Article  Google Scholar 

  • E.A.H. Winkler, D.H. Bodicoat, G.N. Healy, K. Bakrania, T. Yates, N. Owen, D.W. Dunstan, C.L. Edwardson, Identifying adults’ valid waking wear time by automated estimation in activPAL data collected with a 24 h wear protocol. Physiol. Meas. 37, 1653–1668 (2016). https://doi.org/10.1088/0967-3334/37/10/1653

    Article  Google Scholar 

  • E.A.H. Winkler, S. Chastin, E.G. Eakin, N. Owen, A.D. Lamontagne, M. Moodie, P.C. Dempsey, B.A. Kingwell, D.W. Dunstan, G.N. Healy, Cardiometabolic impact of changing sitting, standing, and stepping in the workplace. Med. Sci. Sports Exerc. 50, 516–524 (2018). https://doi.org/10.1249/MSS.0000000000001453

    Article  Google Scholar 

  • World Health Organisation, Active ageing: a policy framework (2002)

    Google Scholar 

  • World Health Organisation, Global recommendations on physical activity for health. Geneva (2010)

    Google Scholar 

Download references

Acknowledgements

We would like to thank the participants of the AusDiab study. We would also like to acknowledge the help of and helpful discussions with Elisabeth Winkler, Neville Owen and David Dunstan. This work was partly supported by the Scottish Government’s Rural and Environment Science and Analytical Services Division [DM and JPA] and by the Spanish Ministry of Science, Innovation and Universities under the project CODAMET (RTI2018-095518-B-C21, 2019–2021) [JPA].

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sebastien F. M. Chastin .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 Springer Nature Switzerland AG

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

McGregor, D.E., Dall, P.M., Palarea-Albaladejo, J., Chastin, S.F.M. (2021). Compositional Data Analysis in Physical Activity and Health Research. Looking for the Right Balance. In: Filzmoser, P., Hron, K., Martín-Fernández, J.A., Palarea-Albaladejo, J. (eds) Advances in Compositional Data Analysis. Springer, Cham. https://doi.org/10.1007/978-3-030-71175-7_19

Download citation

Publish with us

Policies and ethics