Skip to main content

Constructing Multi-scale Connectome Atlas by Learning Graph Laplacian of Common Network

  • Conference paper
  • First Online:
Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 (MICCAI 2019)

Abstract

Recent development of neuroimaging and network science allow us to visualize and characterize the whole brain connectivity map in vivo. As the importance of volumetric image atlas, a common brain connectivity map (called connectome atlas) across individuals can offer a new window to understand the neurobiological underpinning of cognition and behavior that are related to brain development or neuro-disorders. However, a major obstacle to the application of classic atlas construction methods in the setting of brain network is that the region-to-region connectivity, often encoded in a graph, does not exactly comply with the Euclidean space that has widely been used for the regular data structure such as grid. To address this challenge, we first turn the brain network (encoded in the graph) into a set of graph signals in the Euclidean space via the diffusion mapping technique. Furthermore, we cast the construction of connectome atlas into a learning-based graph inference model that simultaneously (1) aligns all individual graph signals to a common space spanned by the graph spectrum bases of the latent common network, and (2) learns graph Laplacian of the common network that is in consensus with all aligned graph signals. We have evaluated our novel connectome atlas method with the comparison to the counterpart non-learning based methods in analyzing the brain networks for both neurodevelopmental and neurodegenerative diseases, where our proposed learning-based method shows more reasonable results in terms of accuracy and replicability.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Sporns, O.: Networks of the Brain. The MIT Press, Cambridge (2011)

    MATH  Google Scholar 

  2. Joshi, S., Davis, B., Jomier, M., Gerig, G.: Unbiased diffeomorphic atlas construction for computational anatomy. NeuroImage 23, S151–S160 (2004)

    Article  Google Scholar 

  3. Shen, X., Tokoglu, F., Papademetris, X., Constable, R.T.: Groupwise whole-brain parcellation from resting-state fMRI data for network node identification. Neuroimage 82, 403–415 (2013)

    Article  Google Scholar 

  4. Fan, L., et al.: The human brainnetome atlas: a new brain atlas based on connectional architecture. Cereb. Cortex 26, 3508–3526 (2016)

    Article  Google Scholar 

  5. Rekik, I., Li, G., Lin, W., Shen, D.: Estimation of brain network atlases using diffusive-shrinking graphs: application to developing brains. In: International Conference on Information Processing in Medical Imaging, pp. 385–397 (2017)

    Google Scholar 

  6. Coifman, R.R., Lafon, S.: Diffusion maps. Appl. Comput. Harmonic Anal. 21, 5–30 (2006)

    Article  MathSciNet  Google Scholar 

  7. Shuman, D.I., Narang, S.K., Frossard, P., Ortega, A., Vandergheynst, P.: The emerging field of signal processing on graphs: extending high-dimensional data analysis to networks and other irregular domains. IEEE Signal Process. Mag. 30, 83–98 (2013)

    Article  Google Scholar 

  8. Kalofolias, V.: How to learn a graph from smooth signals. Proc. Mach. Learn. Res. 51, 920–929 (2016)

    Google Scholar 

  9. Lee, H., Kang, H., Chung, M.K., Kim, B.N., Lee, D.S.: Persistent brain network homology from the perspective of dendrogram. IEEE Trans. Med. Imaging 31, 1387–1402 (2012)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Guorong Wu .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Kim, M. et al. (2019). Constructing Multi-scale Connectome Atlas by Learning Graph Laplacian of Common Network. In: Shen, D., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2019. MICCAI 2019. Lecture Notes in Computer Science(), vol 11766. Springer, Cham. https://doi.org/10.1007/978-3-030-32248-9_81

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-32248-9_81

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-32247-2

  • Online ISBN: 978-3-030-32248-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics