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Oak Ridge OpenSHMEM Benchmark Suite

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OpenSHMEM and Related Technologies. OpenSHMEM in the Era of Extreme Heterogeneity (OpenSHMEM 2018)

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Abstract

The assessment of application performance is a fundamental task in high-performance computing (HPC). The OpenSHMEM Benchmark (OSB) suite is a collection of micro-benchmarks and mini-applications/compute kernels that have been ported to use OpenSHMEM. Some, like the NPB OpenSHMEM benchmarks, have been published before while most others have been used for evaluations but never formally introduced or discussed. This suite puts them together and is useful for assessing the performance of different use cases of OpenSHMEM. This offers system implementers a useful means of measuring performance and assessing the effects of new features as well as implementation strategies. The suite is also useful for application developers to assess the performance of the growing number of OpenSHMEM implementations that are emerging. In this paper, we describe the current set of codes available within the OSB suite, how they are intended to be used, and, where possible, a snapshot of their behavior on one of the OpenSHMEM implementations available to us. We also include detailed descriptions of every benchmark and kernel, focusing on how OpenSHMEM was used. This includes details on the enhancements we made to the benchmarks to support multithreaded variants. We encourage the OpenSHMEM community to use, review, and provide feedback on the benchmarks.

This work was sponsored by the U.S. Department of Energy’s Office of Advanced Scientific Computing Research. This manuscript has been authored by UT-Battelle, LLC under Contract No. DE-AC05-00OR22725 with the U.S. Department of Energy. The United States Government retains and the publisher, by accepting the article for publication, acknowledges that the United States Government retains a non-exclusive, paid-up, irrevocable, world-wide license to publish or reproduce the published form of this manuscript, or allow others to do so, for United States Government purposes. The Department of Energy will provide public access to these results of federally sponsored research in accordance with the DOE Public Access Plan (http://energy.gov/downloads/doe-public-access-plan). This research used resources of the Oak Ridge Leadership Computing Facility at the Oak Ridge National Laboratory, which is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC05-00OR22725.

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Notes

  1. 1.

    The test with results shown in Listing 2 was run on a Cray XC30 using command: aprun -n 256 -S 8 -j 1 ./graph500_shmem_one_sided 24 16.

  2. 2.

    The test with results shown in Listing 4 was run on a Linux Cluster (Turing) using command: orterun -np 4 --map-by ppr:2:node --bind-to socket --hostfile hosts -x OMP_NUM_THREADS=8 -x SCALE=32 ./ssca1.

  3. 3.

    The test was run using command: aprun -d 16 -S 1 -n $NPES ./shoms --input barrier.txt --maxsize 8.

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Acknowledgements

This research was supported by the United States Department of Defense (DoD) and Computational Research and Development Programs at Oak Ridge National Laboratory. This work was sponsored by the U.S. Department of Energy’s Office of Advanced Scientific Computing Research. This research used resources of the Oak Ridge Leadership Computing Facility at the Oak Ridge National Laboratory, which is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC05-00OR22725.

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Correspondence to Thomas Naughton .

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Naughton, T., Aderholdt, F., Baker, M., Pophale, S., Gorentla Venkata, M., Imam, N. (2019). Oak Ridge OpenSHMEM Benchmark Suite. In: Pophale, S., Imam, N., Aderholdt, F., Gorentla Venkata, M. (eds) OpenSHMEM and Related Technologies. OpenSHMEM in the Era of Extreme Heterogeneity. OpenSHMEM 2018. Lecture Notes in Computer Science(), vol 11283. Springer, Cham. https://doi.org/10.1007/978-3-030-04918-8_13

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  • DOI: https://doi.org/10.1007/978-3-030-04918-8_13

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