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What Have We Learned from SH2 Domains?

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SH2 Domains

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1555))

Abstract

SH2 domains first shed light on the key role of modular binding domains in cell signaling. Much of what we now know about the logic and design principles underlying cell signaling mechanisms, and how such mechanisms might have evolved, can be traced back to early work on SH2 domains. Here we briefly outline several key concepts that emerged from such studies.

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References

  1. Sadowski I, Stone JC, Pawson T (1986) A noncatalytic domain conserved among cytoplasmic protein-tyrosine kinases modifies the kinase function and transforming activity of fujinami sarcoma virus P130gag-fps. Mol Cell Biol 6:4396–4408

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Pawson T (1995) Protein modules and signalling networks. Nature 373:573–579

    Article  CAS  PubMed  Google Scholar 

  3. Orengo CA, Thornton JM (2005) Protein families and their evolution-a structural perspective. Annu Rev Biochem 74:867–900

    Article  CAS  PubMed  Google Scholar 

  4. Müller A, MacCallum RM, Sternberg MJ (2002) Structural characterization of the human proteome. Genome Res 12:1625–41

    Google Scholar 

  5. Vogel C, Bashton M, Kerrison ND, Chothia C, Teichmann SA (2004) Structure, function and evolution of multidomain proteins. Curr Opin Struct Biol 14:208–216

    Article  CAS  PubMed  Google Scholar 

  6. Machida K, Mayer BJ (2005) The SH2 domain: versatile signaling module and pharmaceutical target. Biochim Biophys Acta 1747:1–25

    Article  CAS  PubMed  Google Scholar 

  7. Liu BA, Engelmann BW, Nash PD (2012) The language of SH2 domain interactions defines phosphotyrosine-mediated signal transduction. FEBS Lett 586:2597–2605

    Article  CAS  PubMed  Google Scholar 

  8. Seet BT, Dikic I, Zhou MM, Pawson T (2006) Reading protein modifications with interaction domains. Nat Rev Mol Cell Biol 7:473–483

    Article  CAS  PubMed  Google Scholar 

  9. Jenuwein T, Allis CD (2001) Translating the histone code. Science 293:1074–1080

    Article  CAS  PubMed  Google Scholar 

  10. Strahl BD, Allis CD (2000) The language of covalent histone modifications. Nature 403:41–45

    Article  CAS  PubMed  Google Scholar 

  11. Zentner GE, Henikoff S (2013) Regulation of nucleosome dynamics by histone modifications. Nat Struct Mol Biol 20:259–266

    Article  CAS  PubMed  Google Scholar 

  12. Liu BA, Jablonowski K, Raina M, Arce M, Pawson T, Nash P (2006) The human and mouse complement of SH2 domain proteins–establishing the boundaries of phosphotyrosine signaling. Mol Cell 22:851–868

    Article  PubMed  Google Scholar 

  13. Huang H, Li L, Wu C, Schibli D, Colwill K, Ma S, Li C, Roy P, Ho K, Songyang Z, Pawson T, Gao Y, Li SS (2008) Defining the specificity space of the human SRC homology 2 domain. Mol Cell Proteomics 7:768–784

    Article  CAS  PubMed  Google Scholar 

  14. Jones RB, Gordus A, Krall JA, MacBeath G (2006) A quantitative protein interaction network for the ErbB receptors using protein microarrays. Nature 439:168–174

    Article  CAS  PubMed  Google Scholar 

  15. Machida K, Thompson CM, Dierck K, Jablonowski K, Kärkkäinen S, Liu B, Zhang H, Nash PD, Newman DK, Nollau P, Pawson T, Renkema GH, Saksela K, Schiller MR, Shin DG, Mayer BJ (2007) High-throughput phosphotyrosine profiling using SH2 domains. Mol Cell 26:899–915

    Article  CAS  PubMed  Google Scholar 

  16. Basu MK, Carmel L, Rogozin IB, Koonin EV (2008) Evolution of protein domain promiscuity in eukaryotes. Genome Res 18:449–461

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Bhattacharyya RP, Reményi A, Yeh BJ, Lim WA (2006) Domains, motifs, and scaffolds: the role of modular interactions in the evolution and wiring of cell signaling circuits. Annu Rev Biochem 75:655–680

    Article  CAS  PubMed  Google Scholar 

  18. Lim WA (2002) The modular logic of signaling proteins: building allosteric switches from simple binding domains. Curr Opin Struct Biol 12:61–68

    Article  CAS  PubMed  Google Scholar 

  19. Schlessinger J, Lemmon MA (2003) SH2 and PTB domains in tyrosine kinase signaling. Sci STKE 2003:RE12

    PubMed  Google Scholar 

  20. Margolis B, Skolnik EY (1994) Activation of Ras by receptor tyrosine kinases. J Am Soc Nephrol 5:1288–1299

    CAS  PubMed  Google Scholar 

  21. Toettcher JE, Voigt CA, Weiner OD, Lim WA (2011) The promise of optogenetics in cell biology: interrogating molecular circuits in space and time. Nat Methods 8:35–38

    Article  CAS  PubMed  Google Scholar 

  22. Zhang K, Cui B (2015) Optogenetic control of intracellular signaling pathways. Trends Biotechnol 33:92–100

    Article  PubMed  Google Scholar 

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Correspondence to Bruce J. Mayer .

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Mayer, B.J. (2017). What Have We Learned from SH2 Domains?. In: Machida, K., Liu, B. (eds) SH2 Domains. Methods in Molecular Biology, vol 1555. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6762-9_2

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  • DOI: https://doi.org/10.1007/978-1-4939-6762-9_2

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6760-5

  • Online ISBN: 978-1-4939-6762-9

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