Abstract
Microtubules are dynamic cytoskeletal polymers that polymerize and depolymerize while interacting with different proteins and structures within the cell. The highly regulated dynamic properties as well as the pushing and pulling forces generated by dynamic microtubule ends play important roles in processes such as in cell division. For instance, microtubule end-binding proteins are known to affect dramatically the dynamic properties of microtubules, and cortical dyneins are known to mediate pulling forces on microtubule ends. We discuss in this chapter our efforts to reconstitute these systems in vitro and mimic their interactions with structures within the cellĀ using micro-fabricated barriers. Using an optical tweezers setup, we investigate the dynamics and forces of microtubules growing against functionalized barriers in the absence and presence of end-binding proteins and barrier-attached motor proteins. This setup allows high-speed as well as nanometer and piconewton resolution measurements on dynamic microtubules.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Mitchison T, Kirschner M (1984) Dynamic instability of microtubule growth. Nature 312:237ā242. doi:10.1038/312237a0
Scholey J, Brust-Mascher I, Mogilner A (2003) Cell division. Nature 422:746ā752. doi:10.1038/nature01599
Howard J, Hyman AA (2003) Dynamics and mechanics of the microtubule plus end. Nature 422:753ā758. doi:10.1038/nature01600
Grill S, Hyman AA (2005) Spindle positioning by cortical pulling forces. Dev Cell 8:461ā465. doi:10.1016/j.devcel.2005.03.014
Tran PT, Marsh L, Doye V, Inoue S, Chang F (2001) A mechanism for nuclear positioning in fission yeast based on microtubule pushing. J Cell Biol 153:397ā411. doi:10.1083/jcb.153.2.397
Kimura A, Onami S (2007) Local cortical pulling-force repression switches centrosomal centration and posterior displacement in C. elegans. J Cell Biol 179:1347ā1354. doi:10.1083/jcb.200706005
Dogterom M, Surrey T (2013) Microtubule organization in vitro. Curr Opin Cell Biol 25:23ā29. doi:10.1016/j.ceb.2012.12.002
Dogterom M, Yurke B (1997) Measurement of the force-velocity relation for growing microtubules. Science 278:856ā860. doi:10.1126/science.278.5339.856
Janson M, de Dood M, Dogterom M (2003) Dynamic instability of microtubules is regulated by force. J Cell Biol 161:1029ā1034. doi:10.1083/jcb.200301147
Laan L, Pavin N, Husson J, Romet-Lemonne G, van Duijn M, Preciado-Lopez M, Vale RD, JĆ¼licher F, Reck-Peterson SL, Dogterom M (2012) Cortical dynein controls microtubule dynamics to generate pulling forces that position microtubule asters. Cell 148:502ā514. doi:10.1016/j.cell.2012.01.007
Roth S, Laan L, Dogterom M (2014) Reconstitution of cortical dynein function. In: Vale RD (ed) Reconstituting the cytoskeleton, vol 540, Methods in enzymology. Academic, New York, NY, pp 205ā230. doi:10.1016/B978-0-12-397924-7.00012-1
Kerssemakers JWJ, Munteanu EL, Laan L, Noetzel TL, Janson ME, Dogterom M (2006) Assembly dynamics of microtubules at molecular resolution. Nature 442:709ā712. doi:10.1038/nature04928
Kerssemakers JWJ, Janson ME, van der Horst A, Dogterom M (2003) Optical trap setup for measuring microtubule pushing forces. Appl Phys Lett 83:4441ā4443. doi:10.1063/1.1629796
Laan L, Dogterom M (2010) In vitro assays to study force generation at dynamic microtubule ends. In: Wilson L, Correia JJ (eds) Microtubules, in vitro, vol 95, Methods in cell biology. Springer, Berlin, pp 617ā639. doi:10.1016/S0091-679X(10)95031-0
Kalisch S-M, Laan L, Dogterom M (2011) Force generation by dynamic microtubules in vitro. Methods Cell Biol 777:147ā165. doi:10.1007/978-1-61779-252-6_11
Love J, Estroff L, Kriebel J, Nuzzo R, Whitesides G (2005) Self-assembled monolayers of thiolates on metals as a form of nanotechnology. Chem Rev 105:1103ā1169. doi:10.1021/cr0300789
Reck-Peterson SL, Yildiz A, Carter AP, Gennerich A, Zhang N, Vale RD (2006) Single-molecule analysis of dynein processivity and stepping behavior. Cell 126:335ā348. doi:10.1016/j.cell.2006.05.046
Goodman BS, Reck-Peterson SL (2014) Engineering defined motor ensembles with DNA origami. In: Vale RD (ed) Reconstituting the cytoskeleton, vol 540, Methods in enzymology. Academic, New York, NY, pp 169ā188. doi:10.1016/B978-0-12-397924-7.00010-8
Cassidy-Hanley DM (2012) Tetrahymena in the laboratory: strain resources, methods for culture, maintenance, and storage. Methods Cell Biol 109:237ā276. doi:10.1016/B978-0-12-385967-9.00008-6
Gutierrez JC, Orias E (1992) Genetic characterization of Tetrahymena thermophila mutants unable to secrete capsules. Dev Genet 13:160ā166. doi:10.1002/dvg.1020130210
Thompson GA, Baugh LC, Walker LF (1974) Nonlethal deciliation of Tetrahymena by a local anesthetic and its utility as a tool for studying cilia regeneration. J Cell Biol 61:253ā257. doi:10.1083/jcb.61.1.253
Mucus minus tetrahymena strain: SB715, Cornell Tetrahymena Stock Center, ID: SD01508 exoA1/exoA1; chx1-1/CHX1-1 (exoA1; CHX1; exo minus; cy-s, II), (http://tetrahymena.vet.cornell.edu).
Romet-Lemonne G, van Duijn M, Dogterom M (2005) Three-dimensional control of protein patterning in microfabricated devices. Nano Lett 5:2350ā2354. doi:10.1021/nl0507111
Dogterom M, Kerssemakers JWJ, Romet-Lemonne G, Janson ME (2005) Force generation by dynamic microtubules. Curr Opin Cell Biol 17:67ā74. doi:10.1016/j.ceb.2004.12.011
Satir B, Sale WS, Satir P (1976) Membrane renewal after dibucaine deciliation of Tetrahymena ā freeze-fracture technique, cilia, membrane structure. Exp Cell Res 97:83ā91. doi:10.1016/0014-4827(76)90657-1
Johnson KA (1986) Preparation and properties of dynein from Tetrahymena cilia. Methods Enzymol 134:306ā317
Boal AK, Tellez H, Rivera SB, Miller NE, Bachand GD, Bunker BC (2006) The stability and functionality of chemically crosslinked microtubules. Small 2:793ā803. doi:10.1002/smll.200500381
Visscher K, Gross SP, Block SM (1996) Construction of multiple-beam optical traps with nanometer-resolution position sensing. IEEE J Sel Top Quantum Electron 2:1066ā1076. doi:10.1109/2944.577338
Gittes F, Schmidt CF (1998) Signals and noise in micromechanical measurements. Methods Cell Biol 55:129ā156
Visscher K, Schnitzer MJ, Block SM (1999) Single kinesin molecules studied with a molecular force clamp. Nature 400:184ā189. doi:10.1038/22146
Laan L, Husson J, Munteanu EL, Kerssemakers JWJ, Dogterom M (2008) Force-generation and dynamic instability of microtubule bundles. Proc Natl Acad Sci U S A 105:8920ā8925. doi:10.1073/pnas.0710311105
Muller-Reichert T, Chretien D, Severin F, Hyman AA (1998) Structural changes at microtubule ends accompanying GTP hydrolysis: information from a slowly hydrolyzable analogue of GTP, guanylyl (alpha, beta)methylenediphosphonate. Proc Natl Acad Sci U S A 95:3661ā3666. doi:10.1073/pnas.95.7.3661
Gardner MK, Zanic M, Howard J (2013) Microtubule catastrophe and rescue. Curr Opin Cell Biol 25:14ā22. doi:10.1016/j.ceb.2012.09.006
Bieling P, Laan L, Schek H, Munteanu EL, Sandblad L, Dogterom M, Brunner D, Surrey T (2007) Reconstitution of a microtubule plus-end tracking system in vitro. Nature 450:1100ā1105. doi:10.1038/nature06386
Akhmanova A, Steinmetz MO (2008) Tracking the ends: a dynamic protein network controls the fate of microtubule tips. Nat Rev Mol Cell Biol 9:309ā322. doi:10.1038/nrm2369
Ron H, Matlis S, Rubinstein I (1998) Self-assembled monolayers on oxidized metals. 2. Gold surface oxidative pre-treatment, monolayer properties, and depression formation. Langmuir 14:1116ā1121. doi:10.1021/la970785v
Acknowledgments
We thank Matthew Footer for the help in setting up the axoneme purification from Tetrahymena thermophila and Samara Reck-Peterson and her lab for the training and assistance in setting up the dynein purification from Saccharomyces cerevisiae.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
Ā© 2017 Springer Science+Business Media New York
About this protocol
Cite this protocol
Baclayon, M. et al. (2017). Optical Tweezers-Based Measurements of Forces and Dynamics at Microtubule Ends. In: Gennerich, A. (eds) Optical Tweezers. Methods in Molecular Biology, vol 1486. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6421-5_16
Download citation
DOI: https://doi.org/10.1007/978-1-4939-6421-5_16
Published:
Publisher Name: Humana Press, New York, NY
Print ISBN: 978-1-4939-6419-2
Online ISBN: 978-1-4939-6421-5
eBook Packages: Springer Protocols