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Proteomic Profiling of Cell Death: Stable Isotope Labeling and Mass Spectrometry Analysis

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Programmed Cell Death

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1419))

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Abstract

Proteins directly control almost all cellular processes and researchers in many biological areas routinely use mass spectrometry for the characterization of proteins. Amongst a growing list of available quantitative proteomic techniques, Stable Isotope Labeling by Amino acids in Culture (SILAC) remains one of the most simple, accurate, and robust techniques for cultured cellular systems. SILAC enables strict quantitative peptide measurements, thus removing false positives and facilitates large-scale kinetics of entire proteomes. In this, chapter we describe an optimized labeling strategy and experimental design for SILAC workflows for characterizing the components downstream of cell death stimuli.

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Correspondence to Andrew I. Webb .

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Webb, A.I. (2016). Proteomic Profiling of Cell Death: Stable Isotope Labeling and Mass Spectrometry Analysis. In: Puthalakath, H., Hawkins, C. (eds) Programmed Cell Death. Methods in Molecular Biology, vol 1419. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-3581-9_20

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  • DOI: https://doi.org/10.1007/978-1-4939-3581-9_20

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-3579-6

  • Online ISBN: 978-1-4939-3581-9

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