Abstract
An analysis of the mitochondrial respiration function represented by the oxygen consumption rate is necessary to assess mitochondrial bioenergetics and redox function. This protocol describes two alternative techniques to evaluate mitochondrial respiration function in situ: (1) measure oxygen consumption rates via an electrode; (2) measure oxygen consumption rates via a seahorse instrument. These in situ approaches provide more physiological access to mitochondria to evaluate mitochondrial respiration function in a relatively integrated cellular system.
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References
Baccelli I, Gareau Y, Lehnertz B et al (2019) Mubritinib targets the electron transport chain complex I and reveals the landscape of OXPHOS dependency in acute myeloid leukemia. Cancer Cell 36(1):84–99 e88
Qin Y, Gao M, Li A et al (2018) Mitoflash lights single mitochondrial dynamics events in mature cardiomyocytes. Biochem Biophys Res Commun 503(2):729–736
Qin Y, Li A, Liu B et al (2020) Mitochondrial fusion mediated by fusion promotion and fission inhibition directs adult mouse heart function in a different direction. FASEB J 34(1):663–675
Zacksenhaus E, Shrestha M, Liu JC et al (2017) Mitochondrial OXPHOS induced by RB1 deficiency in breast cancer: implications for anabolic metabolism, stemness, and metastasis. Trends Cancer 3(11):768–779
Li Z, Graham BH (2012) Measurement of mitochondrial oxygen consumption using a Clark electrode. Methods Mol Biol 837:63–72
Takahashi E, Yamaoka Y (2017) Simple and inexpensive technique for measuring oxygen consumption rate in adherent cultured cells. J Physiol Sci 67(6):731–737
Gao M, Li A, Qin Y et al (2020) Protocol for measurement of oxygen consumption rate in situ in permeabilized cardiomyocytes. STAR Protoc 1(2):100072
Plitzko B, Loesgen S (2018) Measurement of oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) in culture cells for assessment of the energy metabolism. Bio-protocol 8(10):e2850
Gao M, Qin Y, Li A et al (2021) Mitoflash generated at the Qo site of mitochondrial complex III. J Cell Physiol 236(4):2920–2933
Gong G, Liu X, Zhang H et al (2015) Mitochondrial flash as a novel biomarker of mitochondrial respiration in the heart. Am J Phys Heart Circ Phys 309(7):H1166–H1177
Kuznetsov AV, Veksler V, Gellerich FN et al (2008) Analysis of mitochondrial function in situ in permeabilized muscle fibers, tissues and cells. Nat Protoc 3(6):965–976
Li A, Gao M, Liu B et al (2022) Inhibition of mitochondrial superoxide promotes the development of hiPS-CMs during differentiation. Free Radic Biol Med 190:94–104
Gong G, Song M, Csordas G et al (2015) Parkin-mediated mitophagy directs perinatal cardiac metabolic maturation in mice. Science (New York, NY) 350(6265):aad2459
Liao P-C, Bergamini C, Fato R et al (2020) Chapter 1 – Isolation of mitochondria from cells and tissues. In: Pon LA, Schon EA (eds) Methods in cell biology, vol 155. Academic Press, Amsterdam, pp 3–31
Amidzadeh Z, Behbahani AB, Erfani N et al (2014) Assessment of different permeabilization methods of minimizing damage to the adherent cells for detection of intracellular RNA by flow cytometry. Avicenna J Med Biotechnol 6(1):38–46
Symersky J, Osowski D, Walters DE et al (2012) Oligomycin frames a common drug-binding site in the ATP synthase. Proc Natl Acad Sci 109(35):13961–13965
Kenwood BM, Weaver JL, Bajwa A et al (2014) Identification of a novel mitochondrial uncoupler that does not depolarize the plasma membrane. Mol Metab 3(2):114–123
Forkink M, Basit F, Teixeira J et al (2015) Complex I and complex III inhibition specifically increase cytosolic hydrogen peroxide levels without inducing oxidative stress in HEK293 cells. Redox Biol 6:607–616
Mansoury M, Hamed M, Karmustaji R et al (2021) The edge effect: a global problem. The trouble with culturing cells in 96-well plates. Biochem Biophys Rep 26:100987
Acknowledgments
This work was supported by the National Natural Science Foundation of China (81970333) and the National Key Research and Development Program of China (2018YFA0107102).
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Li, A., Qin, Y., Zhang, Y., Zhen, X., Gong, G. (2024). Evaluation of Oxygen Consumption Rates In Situ. In: Gilkes, D.M. (eds) Hypoxia. Methods in Molecular Biology, vol 2755. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3633-6_16
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DOI: https://doi.org/10.1007/978-1-0716-3633-6_16
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Publisher Name: Humana, New York, NY
Print ISBN: 978-1-0716-3632-9
Online ISBN: 978-1-0716-3633-6
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