Abstract
Enzyme activities are commonly measured in lab assays at a single standard temperature, which does not provide any information on their temperature sensitivity. Temperature is one of the primary controls on enzyme activities, yet few studies have explored how temperature drives enzyme activities in the environment. The temperature sensitivity of enzyme activity is controlled by the structure and conformation of the isoenzymes that constitute an environmental enzyme pool as well as physical and chemical interactions with soil minerals, clays, and organic matter. Yet, these complex relationships are typically represented by a simple Q 10 of 2. There is sufficient evidence to suggest that even for the same enzyme class, temperature sensitivities vary between soils, and even seasonally in a single site. We will explore the controls on enzyme temperature sensitivity and their importance for understanding seasonal patterns in soil processes and their potential responses to global change.
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References
Ågren G, Wetterstedt JÅM (2007) What determines the temperature response of soil organic matter decomposition? Soil Biol Biochem 39:1794–1798
Allen AP, Gillooly JF, Brown JH (2005) Linking the global carbon cycle to individual metabolism. Funct Ecol 19:202–213
Bader NE, Cheng W (2007) Rhizosphere priming effect of Populus fremontii obscures the temperature sensitivity of soil organic carbon respiration. Soil Biol Biochem 39:600–606
Bremner JM, Zatua MI (1975) Enzyme activity in soils at subzero temperatures. Soil Biol Biochem 7:383–387
Chrost RG (1990) Microbial ectoenzymes in aquatic environments. In: Overbeck J, Chrost RJ (eds) Aquatic microbial ecology; biochemical and molecular approaches. Springer, New York, pp 47–78
Chróst RJ, Siuda W (2002) Ecology of microbial enzymes in lake ecosystems. In: Dick RP, Burns RG (eds) Enzymes in the environment: activity, ecology and applications. Marcel Dekker, New York, pp 35–72
Coker JA, Sheridan PP, Loveland-Curtze J, Gutshall KR, Auman AJ, Brenchley JE (2003) Biochemical characterization of a beta-galactosidase with a low temperature optimum obtained from an Antarctic Arthrobacter isolate. J Bacteriol 185:5473–5482
Criquet S, Tagger S, Vogt G, Iacazio G, Le Petit J (1999) Laccase activity of forest litter. Soil Biol Biochem 31:1239–1244
Czimczik CI, Trumbore S, Carbone MS, Winston GC (2006) Changing sources of soil respiration with time since fire in a boreal forest. Global Change Biol 12:1–15
Davidson EA, Janssens IA (2006) Temperature sensitivity of soil carbon decomposition and feedbacks to climate change. Nature 440:165–173
Davidson EA, Janssens IA, Luo Y (2006) On the variability of respiration in terrestrial ecosystems: moving beyond Q10. Global Change Biol 12:154–164
del Giorgio PA, Cole JJ (1998) Bacterial growth efficiency in natural aquatic systems. Annu Rev Ecol Syst 29:503–541
Devevre OC, Horwat WR (2000) Decomposition of rice straw and microbial carbon use efficiency under different soil temperatures and moistures. Soil Biol Biochem 32:1773–1785
Di Nardo C, Cinquegrana A, Papa S, Fuggi A, Fioretto A (2004) Laccase and peroxidase isoenzymes during leaf litter decomposition of Quercus ilex in a Mediterranean ecosystem. Soil Biol Biochem 36:1539–1544
Elsgaard L, Vinther FR (2004) Modeling of the fine-scale temperature response of arylsulfatase activity in soil. J Plant Nutr Soil Sci-Zeitschrift Fur Pflanzenernahrung Und Bodenkunde 167:196–201
Feller G (2003) Molecular adaptations to cold in psychrophilic enzymes. Cell Mol Life Sci 60:648–662
Fenner N, Freeman C, Reynolds B (2005) Observations of a seasonally shifting thermal optimum in peatland carbon-cycling processes; implications for the global carbon cycle and soil enzyme methodologies. Soil Biol Biochem 37:1814–1821
Frankenberger WT, Tabatabai MA (1991a) L-Asparaginase activity of soils. Biol Fertil Soils 11:6–12
Frankenberger WT, Tabatabai MA (1991b) L-Glutaminase activity of soils. Soil Biol Biochem 23:869–874
Gerday C, Aittaleb M, Arpigny JL, Baise E, Chessa JP, Garsoux G, Petrescu I, Feller G (1997) Psychrophilic enzymes: a thermodynamic challenge. Biochimica Et Biophysica Acta-Protein Structure and Molecular Enzymology 1342:119–131
Gillooly JF, Brown JH, West GB, Savage VM, Charnov EL (2001) Effects of size and temperature on metabolic rate. Science 293:2248–2251
Hochachka PW, Somero GN (1984) Biochemical adaptation. Princeton University Press, Princeton, NJ
Huston AL, Krieger-Brockett BB, Deming JW (2000) Remarkably low temperature optima for extracellular enzyme activity from Arctic bacteria and sea ice. Environ Microbiol 2:383–388
Jastrow JD, Miller RM (1997) Soil aggregate stabilization and carbon sequestration: feedbacks through organo-mineral associations. In: Lal R, Kimble JM, Follett RF, Stewart BA (eds) Soil processes and the carbon cycle. CRC, Boca Raton, FL, pp 207–224
Koch O, Tscherko D, Kandeler E (2007) Temperature sensitivity of microbial respiration, nitrogen mineralization, and potential soil enzyme activities in organic alpine soils. Global Biogeochem Cy 21:GB4017. doi:
Kristensen E, Andersen FO, Blackburn TH (1992) Effects of benthic macrofauna and temperature on degradation of macroalgal detritus – the fate of organic-carbon. Limnol Oceanogr 37:1404–1419
Lai CM, Tabatabai MA (1992) Kinetic-parameters of immobilized urease. Soil Biol Biochem 24:225–228
Lloyd J, Taylor JA (1994) On the temperature dependence of soil respiration. Funct Ecol 8:315–323
Lopez-Urrutia A, Moran XAG (2007) Resource limitation of bacterial production distorts the temperature dependence of oceanic carbon cycling. Ecology 88:817–822
Loveland J, Gutshall K, Kasmir J, Prema P, Brenchley JE (1994) Characterization of psychrotrophic microorganisms producing Beta-galactosidase activities. Appl Environ Microbiol 60:12–18
Lugtenberg BJJ, Chin-A-Woeng TFC, Bloemberg GV (2002) Microbe-plant interactions: principles and mechanisms. Antonie Leeuwenhoek Int J Gen Mol Microbiol 81:373–383
McClaugherty CA, Linkins AE (1990) Temperature responses of enzymes in two forest soils. Soil Biol Biochem 22:29–33
Parham JA, Deng SP (2000) Detection, quantification and characterization of beta-glucosaminidase activity in soil. Soil Biol Biochem 32:1183–1190
Parton WJ, Schimel DS, Cole CV, Ojima DS (1987) Analysis of factors controlling soil organic-matter levels in great-plains grassland. Soil Sci Soc Am J 51:1173–1179
Price PB, Sowers T (2004) Temperature dependence of metabolic rates for microbial growth, maintenance, and survival. Proc Natl Acad Sci USA 101:4631–4636
Privalov PL, Tsalkova TN (1979) Micro-stabilities and macro-stabilities of globular-proteins. Nature 280:693–696
Ryan MG, Law BE (2005) Interpreting, measuring, and modeling soil respiration. Biogeochemistry 73:3–27
Sagemann J, Jorgensen BB, Greeff O (1998) Temperature dependence and rates of sulfate reduction in cold sediments of Svalbard, Arctic Ocean. Geomicrobiol J 15:85–100
Sanchez-Perez G, Mira A, Nyiro G, Pasic L, Rodriguez-Valera F (2008) Adapting to environmental changes using specialized paralogs. Trends Genet 24:154–158
Scott-Denton LE, Rosenstiel TN, Monson RK (2006) Differential controls by climate and substrate over the heterotrophic and rhizospheric components of soil respiration. Global Change Biol 12:205–216
Secundo F, Russo C, Giordano A, Carrea G, Rossi M, Raia CA (2005) Temperature-induced conformational change at the catalytic site of Sulfolobus solfataricus alcohol dehydrogenase highlighted by Asn249Tyr substitution. A hydrogen/deuterium exchange, kinetic, and fluorescence quenching study. Biochemistry 44:11040–11048. doi:10.1021/bi050469c
Seto M, Misawa K (1982) Growth rate, biomass production, and carbon balance of Pseudomonas aeruginosa in a glucose-limited medium at temperature and osmotic pressure extremes. Jpn J Ecol 32:365–371
Sinsabaugh RL, Shah JJ (2010) Integrating resource utilization and temperature in metabolic scaling of riverine bacterial production. Ecology 91:1455–1465
Six J, Conant RT, Paul EA, Paustian K (2002) Stabilization mechanisms of soil organic matter: implications for C-saturation of soils. Plant Soil 241:155–176
Sollins P, Homann P, Caldwell BK (1996) Stabilization and destabilization of soil organic matter: mechanisms and controls. Geoderma 74:65–105
Sørensen LH (1972) Stabilization of newly formed amino acid metabolites in soil by clay minerals. Soil Sci 114:5–11
Steinweg JM, Plante AF, Conant RT, Paul EA, Tanaka DL (2008) Patterns of substrate utilization during long-term incubations at different temperatures. Soil Biol Biochem 40:2722–2728
Straub FB (1964) Formation of the secondary and tertiary structure of enzymes. Adv Enzymol Relat Subj Biochem 26:89–114
Tabatabai MA (1982) Soil enzymes. In: Page AL, Miller RH, Keeney DR (eds) Methods of soil analysis. Part 2. Chemical and microbiological properties, 2nd edn. American Society of Agronomy-Soil Science Society of America, Madison, WI
ten Hulscher TEM, Cornelissen G (1996) Effect of temperature on sorption equilibrium and sorption kinetics of organic micropollutants – A review. Chemosphere 32:609–626
Thamdrup B, Hansen JW, Jorgensen BB (1998) Temperature dependence of aerobic respiration in a coastal sediment. FEMS Microbiol Ecol 25:189–200
Tisdall JM, Oades JM (1982) Organic-matter and water-stable aggregates in soils. J Soil Sci 33:141–163
Trasar-Cepeda C, Gil-Sotres F, Leiros MC (2007) Thermodynamic parameters of enzymes in grassland soils from Galicia, NW Spain. Soil Biol Biochem 39:311–319
Tsou CL (1993) Conformational flexbility of enzyme active- sites. Science 262:380–381
Vial Ludovic MC, Dekimpe Groleau V, Deziel E (2007) Burkholderia diversity and versatility: an inventory of the extracellular products. J Microbiol Biotechnol 17:1407–1429
Wallenstein MD, Weintraub MN (2008) Emerging tools for measuring and modeling the in situ activity of soil extracellular enzymes. Soil Biol Biochem 40:2098–2106
Wallenstein MD, McMahon SK, Schimel JP (2009) Seasonal variation in enzyme activities and temperature sensitivities in Arctic tundra soils. Global Change Biol 15:1631–1639
Wilczek S, Fischer H, Pusch MT (2005) Regulation and seasonal dynamics of extracellular enzyme activities in the sediments of a large lowland river. Microb Ecol 50:253–267. doi:10.1007/s00248-004-0119-2
Williams PJ (1973) The validity of the application of simple kinetic analysis to heterogeneous microbial populations. Limnol Oceanogr 18:159–165
Wirth SJ, Wolf GA (1992) Microplate colourimetric assay for endoacting cellulase, xylanase, chitinase, 1, 3-Beta-glucanase and amylase extracted from forest soil horizons. Soil Biol Biochem 24:511–519
Zavodszky P, Kardos J, Svingor A, Petsko GA (1998) Adjustment of conformational flexibility is a key event in the thermal adaptation of proteins. Proc Natl Acad Sci USA 95:7406–7411
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Wallenstein, M., Allison, S.D., Ernakovich, J., Steinweg, J.M., Sinsabaugh, R. (2010). Controls on the Temperature Sensitivity of Soil Enzymes: A Key Driver of In Situ Enzyme Activity Rates. In: Shukla, G., Varma, A. (eds) Soil Enzymology. Soil Biology, vol 22. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-14225-3_13
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DOI: https://doi.org/10.1007/978-3-642-14225-3_13
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